5YYC

Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4)

Summary for 5YYC

DescriptorAlanine racemase, PYRIDOXAL-5'-PHOSPHATE (3 entities in total)
Functional Keywordsalanine racemase, isomerase, bacillus pseudofirmus (of4)
Biological sourceBacillus pseudofirmus (strain OF4)
Total number of polymer chains2
Total molecular weight81234.05
Authors
Dong, H.,Hu, T.T.,He, G.Z.,Lu, D.R.,Qi, J.X.,Dou, Y.S.,Long, W.,He, X.,Su, D.,Ju, J.S. (deposition date: 2017-12-08, release date: 2019-01-02)
Primary citation
Dong, H.,Hu, T.,He, G.,Lu, D.,Qi, J.,Dou, Y.,Long, W.,He, X.,Ju, J.,Su, D.
Structural features and kinetic characterization of alanine racemase from Bacillus pseudofirmus OF4.
Biochem. Biophys. Res. Commun., 497:139-145, 2018
PubMed: 29427660 (PDB entries with the same primary citation)
DOI: 10.1016/j.bbrc.2018.02.041
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.801 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.1742 0.3% 0.7% 1.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5yyc
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Molmil generated image of 5yyc
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Molmil generated image of 5yyc
rotated about y axis by 90°