5YYC

Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003824	molecular_function	catalytic activity
A	0005829	cellular_component	cytosol
A	0006522	biological_process	alanine metabolic process
A	0008784	molecular_function	alanine racemase activity
A	0009252	biological_process	peptidoglycan biosynthetic process
A	0016853	molecular_function	isomerase activity
A	0030170	molecular_function	pyridoxal phosphate binding
A	0030632	biological_process	D-alanine biosynthetic process
C	0003824	molecular_function	catalytic activity
C	0005829	cellular_component	cytosol
C	0006522	biological_process	alanine metabolic process
C	0008784	molecular_function	alanine racemase activity
C	0009252	biological_process	peptidoglycan biosynthetic process
C	0016853	molecular_function	isomerase activity
C	0030170	molecular_function	pyridoxal phosphate binding
C	0030632	biological_process	D-alanine biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	14
Details	binding site for residue PLP A 401

Chain	Residue
A	LYS41
A	TYR352
A	HOH553
A	HOH578
A	HOH693
C	HOH519
A	TYR45
A	ARG139
A	HIS169
A	ASN209
A	SER210
A	ARG225
A	GLY227
A	ILE228

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site_id	AC2
Number of Residues	22
Details	binding site for Di-peptide PLP C 401 and LYS C 41

Chain	Residue
A	ASP318
A	HOH512
A	HOH706
C	VAL39
C	VAL40
C	GLY42
C	ASP43
C	GLY44
C	TYR45
C	GLY65
C	ALA67
C	GLU71
C	ARG139
C	HIS169
C	ASN209
C	SER210
C	ARG225
C	GLY227
C	ILE228
C	TYR352
C	HOH579
C	HOH591

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Functional Information from PROSITE/UniProt

site_id	PS00395
Number of Residues	11
Details	ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKGDGYGHG

Chain	Residue	Details
A	ALA38-GLY48

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