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PDB: 627 results

5A62
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BU of 5a62 by Molmil
Hydrolytic potential of the ammonia-oxidizing Thaumarchaeon Nitrososphaera gargenis - crystal structure and activity profiles of carboxylesterases linked to their metabolic function
Descriptor: ACETATE ION, PUTATIVE ALPHA/BETA HYDROLASE FOLD PROTEIN
Authors:Chow, J, Kaljunen, H, Nittinger, E, Spieck, E, Rarey, M, Mueller-Dieckmann, J, Streit, W.R.
Deposit date:2015-06-24
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hydrolytic Potential of the Ammonia-Oxidizing Thaumarchaeon Nitrososphaera Gargenis - Crystal Structure and Activity Profiles of Carboxylesterases Linked to Their Metabolic Function
To be Published
3M9J
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BU of 3m9j by Molmil
Crystal structure of human thioredoxin C69/73S double mutant, reduced form
Descriptor: Thioredoxin
Authors:Weichsel, A, Montfort, W.R.
Deposit date:2010-03-22
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of human thioredoxin revealing an unraveled helix and exposed S-nitrosation site.
Protein Sci., 19, 2010
8FR5
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BU of 8fr5 by Molmil
Crystal structure of the Human Smacovirus 1 Rep domain
Descriptor: MANGANESE (II) ION, Rep, SODIUM ION
Authors:Limon, L.K, Shi, K, Dao, A, Rugloski, J, Tompkins, K.J, Aihara, H, Gordon, W.R, Evans IIII, R.L.
Deposit date:2023-01-06
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:The crystal structure of the human smacovirus 1 Rep domain.
Acta Crystallogr.,Sect.F, 79, 2023
8EOY
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BU of 8eoy by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI37
Descriptor: 3C-like proteinase, benzyl {(2S)-1-[2-(3-amino-3-oxopropyl)-2-(chloroacetyl)hydrazinyl]-4-methyl-1-oxopentan-2-yl}carbamate (non-preferred name)
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-10-04
Release date:2023-10-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of the SARS-CoV-2 main protease in complex with inhibitors
To Be Published
6RCG
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BU of 6rcg by Molmil
Crystal structure of Casein kinase 1 delta (CK1 delta) complexed with SR3029 inhibitor
Descriptor: 1,2-ETHANEDIOL, Casein kinase I isoform delta, ~{N}-[[6,7-bis(fluoranyl)-1~{H}-benzimidazol-2-yl]methyl]-9-(3-fluorophenyl)-2-morpholin-4-yl-purin-6-amine
Authors:Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Roush, W.R, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-04-11
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Casein kinase 1 delta (CK1 delta) complexed with SR3029 inhibitor
To Be Published
4W8Q
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Crystal structure of truncated hemolysin A from P. mirabilis at 1.4 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
Deposit date:2014-08-26
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.428 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
2FTQ
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BU of 2ftq by Molmil
E. coli thymidylate synthase at 1.8 A resolution
Descriptor: PHOSPHATE ION, SULFATE ION, Thymidylate synthase
Authors:Montfort, W.R, Roberts, S.A.
Deposit date:2006-01-24
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Subtle Conformational Differences between Escherichia coli Thymidylate Synthase and Specific Mutants of this Enzyme
To be Published
6RCH
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BU of 6rch by Molmil
Crystal structure of Casein kinase I isoform delta (CK1 delta) complexed with SR4133 inhibitor
Descriptor: 1,2-ETHANEDIOL, Casein kinase I isoform delta, SODIUM ION, ...
Authors:Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Roush, W.R, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-04-11
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of Casein kinase I isoform delta (CK1 delta) complexed with SR4133 inhibitor
To Be Published
7PZJ
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BU of 7pzj by Molmil
Structure of a bacteroidetal polyethylene terephthalate (PET) esterase
Descriptor: Lipase, POTASSIUM ION
Authors:Zang, H, Dierkes, R, Perez-Garcia, P, Weigert, S, Sternagel, S, Hallam, S.J, Applegate, V, Schumacher, J, Schott, T, Pleiss, J, Almeida, A, Hoecker, B, Smits, S.H, Schmitz, R.A, Chow, J, Streit, W.R.
Deposit date:2021-10-12
Release date:2022-03-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Bacteroidetes Aequorivita sp. and Kaistella jeonii Produce Promiscuous Esterases With PET-Hydrolyzing Activity.
Front Microbiol, 12, 2021
2GA0
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BU of 2ga0 by Molmil
Variable Small Protein 1 of Borrelia turicatae (VspA or Vsp1)
Descriptor: NICKEL (II) ION, surface protein VspA
Authors:Lawson, C.L, Yung, B.H, Barbour, A.G, Zuckert, W.R.
Deposit date:2006-03-07
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of neurotropism-associated variable surface protein 1 (Vsp1) of Borrelia turicatae.
J.Bacteriol., 188, 2006
4W8R
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BU of 4w8r by Molmil
Crystal structure of hemolysin A Y134F from P. mirabilis at 1.5 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
Deposit date:2014-08-26
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.519 Å)
Cite:Crystal structure of hemolysin A Y134F from P. mirabilis at 1.5 Angstroms resolution
To Be Published
2TSR
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BU of 2tsr by Molmil
THYMIDYLATE SYNTHASE FROM RAT IN TERNARY COMPLEX WITH DUMP AND TOMUDEX
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Sotelo-Mundo, R.R, Ciesla, J, Dzik, J.M, Rode, W, Maley, F, Maley, G, Hardy, L.W, Montfort, W.R.
Deposit date:1998-06-19
Release date:1999-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of rat thymidylate synthase inhibited by Tomudex, a potent anticancer drug.
Biochemistry, 38, 1999
5IE2
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BU of 5ie2 by Molmil
Crystal structure of a plant enzyme
Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Fan, M.R, Li, M, Chang, W.R.
Deposit date:2016-02-24
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of Arabidopsis thaliana Oxalyl-CoA Synthetase Essential for Oxalate Degradation
Mol Plant, 9, 2016
2UBP
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BU of 2ubp by Molmil
STRUCTURE OF NATIVE UREASE FROM BACILLUS PASTEURII
Descriptor: NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), PROTEIN (UREASE BETA SUBUNIT), ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:1998-11-04
Release date:1999-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
5IE0
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BU of 5ie0 by Molmil
Crystal structure of a plant enzyme
Descriptor: Oxalate--CoA ligase, S,R MESO-TARTARIC ACID
Authors:Ran, M.R, Li, M, Chang, W.R.
Deposit date:2016-02-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Arabidopsis thaliana Oxalyl-CoA Synthetase Essential for Oxalate Degradation
Mol Plant, 9, 2016
6Z2J
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BU of 6z2j by Molmil
The structure of the dimeric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
Descriptor: Deoxynucleotidyltransferase terminal-interacting protein 1, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Fairall, L, Saleh, A, Ragan, T.J, Millard, C.J, Savva, C.G, Schwabe, J.W.R.
Deposit date:2020-05-16
Release date:2020-07-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure.
Nat Commun, 11, 2020
8AXW
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BU of 8axw by Molmil
The structure of mouse AsterC (GramD1c) with Ezetimibe
Descriptor: (3~{R},4~{S})-1-(4-fluorophenyl)-3-[(3~{S})-3-(4-fluorophenyl)-3-oxidanyl-propyl]-4-(4-hydroxyphenyl)azetidin-2-one, CHLORIDE ION, ETHANOL, ...
Authors:Fairall, L, Xiao, X, Burger, L, Tontonoz, P, Schwabe, J.W.R.
Deposit date:2022-09-01
Release date:2023-09-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Aster-dependent nonvesicular transport facilitates dietary cholesterol uptake.
Science, 382, 2023
6Z2K
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BU of 6z2k by Molmil
The structure of the tetrameric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
Descriptor: Deoxynucleotidyltransferase terminal-interacting protein 1, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Fairall, L, Saleh, A, Ragan, T.J, Millard, C.J, Savva, C.G, Schwabe, J.W.R.
Deposit date:2020-05-16
Release date:2020-07-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure.
Nat Commun, 11, 2020
8B69
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Heterotetramer of K-Ras4B(G12V) and Rgl2(RBD)
Descriptor: Isoform 2B of GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Tariq, M, Fairall, L, Romartinez-Alonso, B, Dominguez, C, Schwabe, J.W.R, Tanaka, K.
Deposit date:2022-09-26
Release date:2023-08-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
7R51
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BU of 7r51 by Molmil
Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp
Descriptor: ARG-ASP, Asp/Glu-specific dipeptidyl-peptidase
Authors:Tham, C.T, Coker, J.A, Foster, W.R, Ohara-Nemoto, Y, Nemoto, T.K, Yue, W.W, Bountra, C, Bezerra, G.A.
Deposit date:2022-02-09
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp
To Be Published
6G16
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BU of 6g16 by Molmil
Structure of the human RBBP4:MTA1(464-546) complex showing loop exchange
Descriptor: Histone-binding protein RBBP4, Metastasis-associated protein MTA1
Authors:Millard, C.J, Varma, N, Fairall, L, Schwabe, J.W.R.
Deposit date:2018-03-20
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of the core NuRD repression complex provides insights into its interaction with chromatin.
Elife, 5, 2016
6GQF
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BU of 6gqf by Molmil
The structure of mouse AsterA (GramD1a) with 25-hydroxy cholesterol
Descriptor: 25-HYDROXYCHOLESTEROL, GLYCEROL, GRAM domain-containing protein 1A
Authors:Fairall, L, Gurnett, J.E, Vashi, D, Sandhu, J, Tontonoz, P, Schwabe, J.W.R.
Deposit date:2018-06-07
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Aster Proteins Facilitate Nonvesicular Plasma Membrane to ER Cholesterol Transport in Mammalian Cells.
Cell, 175, 2018
1HU7
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BU of 1hu7 by Molmil
SOLUTION STRUCTURE OF T7 NOVISPIRIN
Descriptor: T7 NOVISPIRIN
Authors:Sawai, M.V, Waring, A.J, Kearney, W.R, McCray Jr, P.B, Forsyth, W.R, Lehrer, R.I, Tack, B.F.
Deposit date:2001-01-04
Release date:2002-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of single-residue mutations on the structure and function of ovispirin/novispirin antimicrobial peptides.
Protein Eng., 15, 2002
1HU6
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BU of 1hu6 by Molmil
SOLUTION STRUCTURE OF G10 NOVISPIRIN
Descriptor: G10 NOVISPIRIN
Authors:Sawai, M.V, Waring, A.J, Kearney, W.R, McCray Jr, P.B, Forsyth, W.R, Lehrer, R.I, Tack, B.F.
Deposit date:2001-01-04
Release date:2002-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of single-residue mutations on the structure and function of ovispirin/novispirin antimicrobial peptides.
Protein Eng., 15, 2002
1HU5
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BU of 1hu5 by Molmil
SOLUTION STRUCTURE OF OVISPIRIN-1
Descriptor: OVISPIRIN-1
Authors:Sawai, M.V, Waring, A.J, Kearney, W.R, McCray Jr, P.B, Forsyth, W.R, Lehrer, R.I, Tack, B.F.
Deposit date:2001-01-04
Release date:2002-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of single-residue mutations on the structure and function of ovispirin/novispirin antimicrobial peptides.
Protein Eng., 15, 2002

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