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PDB: 48 results

4OJ3
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BU of 4oj3 by Molmil
The crystal structure of V84P mutant of S. solfataricus Acylphosphatase
Descriptor: Acylphosphatase, GLYCEROL, SULFATE ION
Authors:de Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2014-01-20
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Edge strand engineering prevents native-like aggregation in Sulfolobus solfataricus acylphosphatase.
Febs J., 281, 2014
4OJG
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BU of 4ojg by Molmil
The crystal structure of V84D mutant of S. solfataricus acylphosphatase
Descriptor: Acylphosphatase, GLYCEROL, PHOSPHATE ION
Authors:de Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2014-01-21
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.377 Å)
Cite:Edge strand engineering prevents native-like aggregation in Sulfolobus solfataricus acylphosphatase.
Febs J., 281, 2014
1CED
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BU of 1ced by Molmil
THE STRUCTURE OF CYTOCHROME C6 FROM MONORAPHIDIUM BRAUNII, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: CYTOCHROME C6, PROTOPORPHYRIN IX CONTAINING FE
Authors:Banci, L, Bertini, I, Quacquarini, G, Walter, O, Diaz, A, Hervas, M, De La Rosa, M.A.
Deposit date:1996-03-06
Release date:1996-08-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The solution structure of cytochrome c6 from the green alga Monoraphidium braunii
J.Biol.Inorg.Chem., 1, 1996
6Q9Z
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BU of 6q9z by Molmil
Crystal structure of the pathological G167R variant of calcium-free human gelsolin,
Descriptor: GLYCEROL, Gelsolin, SULFATE ION
Authors:Boni, F, Scalone, E, Milani, M, Eloise, M, de Rosa, M.
Deposit date:2018-12-18
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
6QBF
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BU of 6qbf by Molmil
Crystal structure of the pathological D187N variant of calcium-free human gelsolin.
Descriptor: GLYCEROL, Gelsolin, SODIUM ION, ...
Authors:Scalone, E, Boni, F, Milani, M, Eloise, M, de Rosa, M.
Deposit date:2018-12-21
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.499 Å)
Cite:The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
6Q9R
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BU of 6q9r by Molmil
Crystal structure of the pathological N184K variant of calcium-free human gelsolin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Scalone, E, Boni, F, Milani, M, Eloise, M, de Rosa, M.
Deposit date:2018-12-18
Release date:2019-11-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
1TU2
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BU of 1tu2 by Molmil
THE COMPLEX OF NOSTOC CYTOCHROME F AND PLASTOCYANIN DETERMIN WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES
Descriptor: Apocytochrome f, COPPER (II) ION, HEME C, ...
Authors:Diaz-Moreno, I, Diaz-Quintana, A, De la Rosa, M.A, Ubbink, M.
Deposit date:2004-06-24
Release date:2005-03-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the complex between plastocyanin and cytochrome f from the cyanobacterium Nostoc sp. PCC 7119 as determined by paramagnetic NMR. The balance between electrostatic and hydrophobic interactions within the transient complex determines the relative orientation of the two proteins.
J.Biol.Chem., 280, 2005
2V2K
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BU of 2v2k by Molmil
THE CRYSTAL STRUCTURE OF FDXA, A 7FE FERREDOXIN FROM MYCOBACTERIUM SMEGMATIS
Descriptor: ACETATE ION, FE3-S4 CLUSTER, FERREDOXIN
Authors:Ricagno, S, de Rosa, M, Aliverti, A, Zanetti, G, Bolognesi, M.
Deposit date:2007-06-06
Release date:2007-07-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 360, 2007
2N3Y
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BU of 2n3y by Molmil
NMR structure of the Y48pCMF variant of human cytochrome c in its reduced state
Descriptor: Cytochrome c, Mesoheme
Authors:Moreno-Beltran, B, Del Conte, R, Diaz-Quintana, A, De la Rosa, M.A, Turano, P, Diaz-Moreno, I.
Deposit date:2015-06-15
Release date:2016-12-14
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural basis of mitochondrial dysfunction in response to cytochrome c phosphorylation at tyrosine 48.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3IRQ
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BU of 3irq by Molmil
Crystal structure of a Z-Z junction
Descriptor: DNA (5'-D(*AP*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Athanasiadis, A, de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IRR
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BU of 3irr by Molmil
Crystal Structure of a Z-Z junction (with HEPES intercalating)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*A*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*G*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), ...
Authors:Athanasiadis, A, de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
7P2B
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BU of 7p2b by Molmil
Crystal structure of human gelsolin amyloid mutant A551P
Descriptor: CHLORIDE ION, GLYCEROL, Gelsolin, ...
Authors:Bollati, M, de Rosa, M.
Deposit date:2021-07-05
Release date:2022-05-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:A novel hotspot of gelsolin instability triggers an alternative mechanism of amyloid aggregation.
Comput Struct Biotechnol J, 19, 2021
5O2Z
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BU of 5o2z by Molmil
Domain swap dimer of the G167R variant of gelsolin second domain
Descriptor: ACETATE ION, CALCIUM ION, CITRATE ANION, ...
Authors:Boni, F, Milani, M, Mastrangelo, E, de Rosa, M.
Deposit date:2017-05-23
Release date:2017-11-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Gelsolin pathogenic Gly167Arg mutation promotes domain-swap dimerization of the protein.
Hum. Mol. Genet., 27, 2018
5FAE
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BU of 5fae by Molmil
N184K pathological variant of gelsolin domain 2 (trigonal form)
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Boni, F, Milani, M, Ricagno, S, Bolognesi, M, de Rosa, M.
Deposit date:2015-12-11
Release date:2016-10-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of a novel renal amyloidosis due to N184K gelsolin variant.
Sci Rep, 6, 2016
3DHM
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BU of 3dhm by Molmil
Beta 2 microglobulin mutant D59P
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
Deposit date:2008-06-18
Release date:2008-11-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
5FAF
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BU of 5faf by Molmil
N184K pathological variant of gelsolin domain 2 (orthorhombic form)
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Boni, F, Milani, M, Ricagno, s, Bolognesi, M, de Rosa, M.
Deposit date:2015-12-11
Release date:2016-10-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Molecular basis of a novel renal amyloidosis due to N184K gelsolin variant.
Sci Rep, 6, 2016
3DHJ
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BU of 3dhj by Molmil
Beta 2 microglobulin mutant W60C
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
Deposit date:2008-06-18
Release date:2008-11-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
5EHD
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BU of 5ehd by Molmil
Crystal structure of human nucleophosmin-core in complex with cytochrome c
Descriptor: CHLORIDE ION, Nucleophosmin
Authors:Bernardo-Garcia, N, Hermoso, J.A, Gonzalez-Arzola, K, Diaz-Moreno, I, De la Rosa, M.A.
Deposit date:2015-10-28
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of human nucleophosmin-core in complex with cytochrome c
To Be Published
2C7G
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BU of 2c7g by Molmil
FprA from Mycobacterium tuberculosis: His57Gln mutant
Descriptor: 4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-FERREDOXIN REDUCTASE FPRA, ...
Authors:Pennati, A, Razeto, A, De Rosa, M, Pandini, V, Vanoni, M.A, Aliverti, A, Mattevi, A, Coda, A, Zanetti, G.
Deposit date:2005-11-24
Release date:2006-07-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of the His57-Glu214 Ionic Couple Located in the Active Site of Mycobacterium Tuberculosis Fpra.
Biochemistry, 45, 2006
4HOB
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BU of 4hob by Molmil
The crystal structure of the Zalpha domain from Cyprinid Herpes virus 3
Descriptor: Putative uncharacterized protein, SULFATE ION
Authors:Tome, A.R, Kus, K, de Rosa, M, Paulo, L.M, Figueiredo, D, Athanasiadis, A.
Deposit date:2012-10-22
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a poxvirus-like zalpha domain from cyprinid herpesvirus 3
J.Virol., 87, 2013
6QW3
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BU of 6qw3 by Molmil
Calcium-bound gelsolin domain 2
Descriptor: CALCIUM ION, Gelsolin
Authors:Scalone, E, Boni, F, Milani, M, Mastrangelo, E, de Rosa, M.
Deposit date:2019-03-05
Release date:2019-08-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution crystal structure of gelsolin domain 2 in complex with the physiological calcium ion.
Biochem.Biophys.Res.Commun., 518, 2019
4BND
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BU of 4bnd by Molmil
Structure of an atypical alpha-phosphoglucomutase similar to eukaryotic phosphomannomutases
Descriptor: ALPHA-PHOSPHOGLUCOMUTASE, GLYCEROL, SULFATE ION
Authors:Nogly, P, Matias, P.M, De Rosa, M, Castro, R, Santos, H, Neves, A.R, Archer, M.
Deposit date:2013-05-14
Release date:2013-10-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-Resolution Structure of an Atypical [Alpha]-Phosphoglucomutase Related to Eukaryotic Phosphomannomutases
Acta Crystallogr.,Sect.D, 69, 2013
5CKA
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BU of 5cka by Molmil
Human beta-2 microglobulin double mutant W60G-N83V
Descriptor: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
Authors:Sala, B.M, De Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2015-07-15
Release date:2016-05-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability.
Sci Rep, 6, 2016
5CKG
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BU of 5ckg by Molmil
Human beta-2 microglobulin mutant V85E
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL
Authors:Sala, B.M, De Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2015-07-15
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability.
Sci Rep, 6, 2016
5CFH
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BU of 5cfh by Molmil
human beta-2 microglobulin double mutant W60G-Y63W
Descriptor: Beta-2-microglobulin
Authors:Sala, B.M, De Rosa, M, Bolognesi, M, Ricagno, S.
Deposit date:2015-07-08
Release date:2016-05-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability.
Sci Rep, 6, 2016

 

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