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PDB: 722 results

6OB2
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BU of 6ob2 by Molmil
Crystal structure of wild-type KRAS (GMPPNP-bound) in complex with GAP-related domain (GRD) of neurofibromin (NF1)
Descriptor: CHLORIDE ION, GLYCEROL, GTPase KRas, ...
Authors:Tran, T.H, Dharmaiah, S, Simanshu, D.K.
Deposit date:2019-03-19
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.845 Å)
Cite:KRAS G13D sensitivity to neurofibromin-mediated GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 116, 2019
1VT5
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BU of 1vt5 by Molmil
THE CRYSTAL STRUCTURE OF D(CCCCGGGG): A NEW A-FORM VARIANT WITH AN EXTENDED BACKBONE CONFORMATION
Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*GP*GP*G)-3')
Authors:Haran, T.E, Shakked, Z, Wang, A.H.-J, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of d(CCCCGGGG): a new A-form variant with an extended backbone conformation.
J.Biomol.Struct.Dyn., 5, 1987
2PL8
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BU of 2pl8 by Molmil
D(GTATACC) under hydrostatic pressure of 1.04 GPa
Descriptor: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SPERMINE
Authors:Prange, T, Girard, E, Fourme, R, Kahn, R.
Deposit date:2007-04-19
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
2PLO
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BU of 2plo by Molmil
D-(GTATACC) low temperature (100K)
Descriptor: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SODIUM ION
Authors:Prange, T, Lecouvey, M, Migianu-Griffoni, E.
Deposit date:2007-04-20
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Adaptation of macromolecular crystals to extreme conditions: high pressure versus low temperature
To be Published
3BS7
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BU of 3bs7 by Molmil
Crystal structure of the Sterile Alpha Motif (SAM) domain of Hyphen/Aveugle
Descriptor: Protein aveugle
Authors:Rajakulendran, T, Sicheri, F.
Deposit date:2007-12-22
Release date:2008-02-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
2F5W
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BU of 2f5w by Molmil
Cross-linked barnase soaked in 3 M thiourea
Descriptor: Ribonuclease, THIOUREA, ZINC ION
Authors:Prange, T, Salem, M.
Deposit date:2005-11-28
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F56
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BU of 2f56 by Molmil
Barnase cross-linked with glutaraldehyde soaked in 6M urea
Descriptor: Ribonuclease, UREA, ZINC ION
Authors:Prange, T, Salem, M.
Deposit date:2005-11-25
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F4Y
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BU of 2f4y by Molmil
Barnase cross-linked with glutaraldehyde
Descriptor: Ribonuclease, ZINC ION
Authors:Prange, T, Salem, M.
Deposit date:2005-11-24
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F5M
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BU of 2f5m by Molmil
Cross-linked barnase soaked in bromo-ethanol
Descriptor: 2-BROMOETHANOL, Ribonuclease
Authors:Prange, T, Salem, M.
Deposit date:2005-11-26
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F30
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BU of 2f30 by Molmil
Triclinic cross-linked Lysozyme soaked with 4.5M urea
Descriptor: Lysozyme C, NITRATE ION, UREA
Authors:Prange, T, Salem, M.
Deposit date:2005-11-18
Release date:2006-04-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F4A
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BU of 2f4a by Molmil
Triclinic cross-linked lysozyme soaked with thiourea 1.5M
Descriptor: ACETATE ION, Lysozyme C, NITRATE ION, ...
Authors:Prange, T, Salem, M.
Deposit date:2005-11-23
Release date:2006-04-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
2F2N
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BU of 2f2n by Molmil
Triclinic hen egg lysozyme cross-linked by glutaraldehyde
Descriptor: Lysozyme C, NITRATE ION
Authors:Prange, T, Salem, M, Mauguen, Y.
Deposit date:2005-11-17
Release date:2006-04-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
5Y42
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BU of 5y42 by Molmil
Native-crystal structure of three chain non-toxic type II ribosome inactivating protein purified from the seeds of Trichosanthes anguina
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lectin, Seed lectin
Authors:Chandran, T, Vijayan, M.
Deposit date:2017-07-31
Release date:2018-08-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Ligand binding and retention in snake gourd seed lectin (SGSL). A crystallographic, thermodynamic and molecular dynamics study.
Glycobiology, 28, 2018
2F4G
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BU of 2f4g by Molmil
Triclinic cross-linked lysozyme soaked in bromoethanol 1M
Descriptor: 2-BROMOETHANOL, Lysozyme C, NITRATE ION
Authors:Prange, T, Salem, M.
Deposit date:2005-11-23
Release date:2006-04-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.654 Å)
Cite:On the edge of the denaturation process: Application of X-ray diffraction to barnase and lysozyme cross-linked crystals with denaturants in molar concentrations.
Biochim.Biophys.Acta, 1764, 2006
3KCH
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BU of 3kch by Molmil
Baranase crosslinked by glutaraldehyde
Descriptor: PENTANEDIAL, Ribonuclease
Authors:Prange, T, Salem, M, Mauguen, Y.
Deposit date:2009-10-21
Release date:2010-03-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Revisiting glutaraldehyde cross-linking: the case of the Arg-Lys intermolecular doublet
Acta Crystallogr.,Sect.F, 66, 2010
3JW8
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BU of 3jw8 by Molmil
Crystal structure of human mono-glyceride lipase
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, MGLL protein
Authors:Bertrand, T, Auge, F, Houtmann, J, Rak, A, Vallee, F, Mikol, V, Berne, P.F, Michot, N, Cheuret, D, Hoornaert, C, Mathieu, M.
Deposit date:2009-09-18
Release date:2010-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for human monoglyceride lipase inhibition.
J.Mol.Biol., 396, 2010
6AEO
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BU of 6aeo by Molmil
TssL periplasmic domain
Descriptor: GLYCEROL, Maltose/maltodextrin-binding periplasmic protein,TssL
Authors:Ran, T.T, Wang, W.W, Wang, X.B, Xu, D.Q.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the periplasmic domain of TssL, a key membrane component of Type VI secretion system.
Int.J.Biol.Macromol., 120, 2018
6F9W
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BU of 6f9w by Molmil
Crystal structure of the LSM domain of LSM14 in complex with a C-terminal peptide of 4E-T
Descriptor: Eukaryotic translation initiation factor 4E transporter, Protein LSM14 homolog A
Authors:Brandmann, T, Jinek, M.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Molecular architecture of LSM14 interactions involved in the assembly of mRNA silencing complexes.
EMBO J., 37, 2018
6EYE
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BU of 6eye by Molmil
Crystal structure of murine neuroglobin under 150 bar krypton
Descriptor: KRYPTON, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P.
Deposit date:2017-11-12
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mapping Hydrophobic Tunnels and Cavities in Neuroglobin with Noble Gas under Pressure.
Biophys. J., 113, 2017
6EBX
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BU of 6ebx by Molmil
STRUCTURE DETERMINATION OF A DIMERIC FORM OF ERABUTOXIN B, CRYSTALLIZED FROM THIOCYANATE SOLUTION
Descriptor: ERABUTOXIN B, THIOCYANATE ION
Authors:Prange, T, Saludjian, P.
Deposit date:1991-05-31
Release date:1993-01-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure determination of a dimeric form of erabutoxin-b, crystallized from a thiocyanate solution.
Acta Crystallogr.,Sect.B, 48, 1992
8T73
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BU of 8t73 by Molmil
Crystal structure of KRAS4a-R151G with bound GDP and Mg ion
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Tran, T.H, Whitley, M.J, Dharmaiah, S, Simanshu, D.K.
Deposit date:2023-06-19
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Comparative analysis of KRAS4a and KRAS4b splice variants reveals distinctive structural and functional properties.
Sci Adv, 10, 2024
8T71
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BU of 8t71 by Molmil
Crystal Structure of WT KRAS4a with bound GDP and Mg ion
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Tran, T.H, Whitley, M.J, Dharmaiah, S, Simanshu, D.K.
Deposit date:2023-06-19
Release date:2024-02-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparative analysis of KRAS4a and KRAS4b splice variants reveals distinctive structural and functional properties.
Sci Adv, 10, 2024
8T72
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BU of 8t72 by Molmil
Crystal structure of WT KRAS4a with bound GMPPNP and Mg ion
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Tran, T.H, Whitley, M.J, Dharmaiah, S, Simanshu, D.K.
Deposit date:2023-06-19
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Comparative analysis of KRAS4a and KRAS4b splice variants reveals distinctive structural and functional properties.
Sci Adv, 10, 2024
8XX0
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BU of 8xx0 by Molmil
Crystal structure of anti-IgE antibody HMK-12 Fab complexed with IgE F(ab')2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SPE7 immunoglobulin E F(ab')2 heavy chain, ...
Authors:Hirano, T, Koyanagi, A, Kasai, M, Okumura, K.
Deposit date:2024-01-17
Release date:2024-07-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Allosteric inhibition of IgE-Fc epsilon RI interactions by simultaneous targeting of IgE F(ab')2 epitopes.
Commun Biol, 7, 2024
4KNF
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BU of 4knf by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-09
Release date:2013-06-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013

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