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PDB: 2920 results

1S6Z
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Enhanced Green Fluorescent Protein Containing the Y66L Substitution
Descriptor: CHLORIDE ION, green fluorescent protein
Authors:Rosenow, M.A, Huffman, H.A, Phail, M.E, Wachter, R.M.
Deposit date:2004-01-28
Release date:2004-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of the Y66L Variant of Green Fluorescent Protein Supports a Cyclization-Oxidation-Dehydration Mechanism for Chromophore Maturation(,).
Biochemistry, 43, 2004
1S7Z
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BU of 1s7z by Molmil
Structure of Ocr from Bacteriophage T7
Descriptor: CESIUM ION, Gene 0.3 protein
Authors:Walkinshaw, M.D, Taylor, P, Sturrock, S.S, Atanasiu, C, Berg, T, Henderson, R.M, Edwardson, J.M, Dryden, D.T.
Deposit date:2004-01-30
Release date:2004-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure of Ocr from Bacteriophage T7, a Protein that Mimics B-Form DNA
Mol.Cell, 9, 2002
6CPY
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BU of 6cpy by Molmil
Structure of apo GRMZM2G135359 pseudokinase
Descriptor: GRMZM2G135359 pseudokinase
Authors:Aquino, B, Counago, R.M, Godoi, P.H.C, Massirer, K.B, Elkins, J.M, Arruda, P, Structural Genomics Consortium (SGC)
Deposit date:2018-03-14
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of apo GRMZM2G135359 pseudokinase
To be Published
4H75
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BU of 4h75 by Molmil
Crystal structure of human Spindlin1 in complex with a histone H3K4(me3) peptide
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Histone H3, ...
Authors:Yang, N, Wang, W, Wang, Y, Wang, M, Zhao, Q, Rao, Z, Zhu, B, Xu, R.M.
Deposit date:2012-09-20
Release date:2012-10-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Distinct mode of methylated lysine-4 of histone H3 recognition by tandem tudor-like domains of Spindlin1.
Proc.Natl.Acad.Sci.USA, 109, 2012
1IJC
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BU of 1ijc by Molmil
Solution Structure of Bucandin, a Neurotoxin from the Venom of the Malayan Krait
Descriptor: bucandin
Authors:Torres, A.M, Kini, R.M, Nirthanan, S, Kuchel, P.W.
Deposit date:2001-04-25
Release date:2001-12-21
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of bucandin, a neurotoxin from the venom of the Malayan krait (Bungarus candidus).
Biochem.J., 360, 2001
3DLV
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BU of 3dlv by Molmil
Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus.
Descriptor: Signal recognition particle 19 kDa protein
Authors:Egea, P.F, Napetschnig, J, Walter, P, Stroud, R.M.
Deposit date:2008-06-29
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structures of SRP54 and SRP19, the two proteins that organize the ribonucleic core of the signal recognition particle from Pyrococcus furiosus.
Plos One, 3, 2008
6CSW
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BU of 6csw by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a N-methyl-N-propyl-dihydropteridine inhibitor
Descriptor: (7R)-5-butyl-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7,8-dimethyl-7,8-dihydropteridin-6(5H)-one, ACETATE ION, CHLORIDE ION, ...
Authors:dos Reis, C.V, de Souza, G.P, Counago, R.M, Chiodi, C.G, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2018-03-21
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of the Human vaccinia-related kinase bound to a N-methyl-N-propyl-dihydropteridine inhibitor
To Be Published
6CMM
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BU of 6cmm by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropynyl-dihydropteridine inhibitor
Descriptor: (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-5,8-di(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:dos Reis, C.V, de Souza, G.P, Counago, R.M, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2018-03-05
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropynyl-dihydropteridine inhibitor
To Be Published
4HB1
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A DESIGNED FOUR HELIX BUNDLE PROTEIN.
Descriptor: DHP1, UNKNOWN ATOM OR ION
Authors:Schafmeister, C.E, Laporte, S.L, Miercke, L.J.W, Stroud, R.M.
Deposit date:1997-11-10
Release date:1998-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A designed four helix bundle protein with native-like structure.
Nat.Struct.Biol., 4, 1997
6CW3
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BU of 6cw3 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2
Descriptor: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
Authors:Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4HNW
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BU of 4hnw by Molmil
The NatA Acetyltransferase Complex Bound To Inositol Hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1, ...
Authors:Neubauer, J.L, Immormino, R.M, Dollins, D.E, Endo-Streeter, S.T, Pemble IV, C.W, York, J.D.
Deposit date:2012-10-21
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility
To be Published
7T8W
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BU of 7t8w by Molmil
Structure of antibody 3G12 bound to Respiratory Syncytial Virus G central conserved domain mutant S177Q
Descriptor: 3G12 Fab Heavy chain, 3G12 Fab Light chain, Mature secreted glycoprotein G
Authors:Nunez Castrejon, A.M, O'Rourke, S.M, Kauvar, L.M, DuBois, R.M.
Deposit date:2021-12-17
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based Design and Antigenic Validation of Respiratory Syncytial Virus G Immunogens.
J.Virol., 96, 2022
6D1X
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BU of 6d1x by Molmil
N-Domain Of Grp94, with the Charged Domain, In Complex With the Novel Ligand N-Propyl Carboxyamido Adenosine
Descriptor: Endoplasmin, N-PROPYL CARBOXYAMIDO ADENOSINE, TETRAETHYLENE GLYCOL
Authors:Gewirth, D.T, Immormino, R.M.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:NECA derivatives exploit the paralog-specific properties of the site 3 side pocket of Grp94, the endoplasmic reticulum Hsp90.
J.Biol.Chem., 294, 2019
7TBG
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BU of 7tbg by Molmil
AtTPC1 D454N with 1 mM Ca2+
Descriptor: CALCIUM ION, SODIUM ION, Two pore calcium channel protein 1
Authors:Dickinson, M.S, Stroud, R.M.
Deposit date:2021-12-22
Release date:2022-02-02
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TDF
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BU of 7tdf by Molmil
AtTPC1 D454N with 1 mM EDTA state I
Descriptor: Two pore calcium channel protein 1
Authors:Dickinson, M.S, Stroud, R.M.
Deposit date:2021-12-31
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
5VYO
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BU of 5vyo by Molmil
The complex structure of Burkholderia pseudomallei DsbA bound to a peptide
Descriptor: Disulfide bond formation protein B, Thiol:disulfide interchange protein
Authors:McMahon, R.M, Martin, J.L.
Deposit date:2017-05-25
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Virulence of the Melioidosis Pathogen Burkholderia pseudomallei Requires the Oxidoreductase Membrane Protein DsbB.
Infect. Immun., 86, 2018
3DKV
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BU of 3dkv by Molmil
Crystal structure of adenylate kinase variant AKlse1
Descriptor: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ...
Authors:Bannen, R.M, Bianchetti, C.M, Bingman, C.A, Bitto, E.B.
Deposit date:2008-06-26
Release date:2009-06-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of adenylate kinase variant AKlse1.
To be Published
6CX0
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BU of 6cx0 by Molmil
Structure of AtTPC1 D376A
Descriptor: (1S,3R)-1-(3-{[4-(2-fluorophenyl)piperazin-1-yl]methyl}-4-methoxyphenyl)-2,3,4,9-tetrahydro-1H-beta-carboline-3-carboxylic acid, CALCIUM ION, Two pore calcium channel protein 1
Authors:Kintzer, A.F, Stroud, R.M.
Deposit date:2018-04-02
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1JMG
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BU of 1jmg by Molmil
CONTRIBUTIONS OF ORIENTATION AND HYDROGEN BONDING TO CATALYSIS IN ASN-229 MUTANTS OF THYMIDYLATE SYNTHASE
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Finer-Moore, J, Stroud, R.M.
Deposit date:1997-09-13
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Contributions of orientation and hydrogen bonding to catalysis in Asn229 mutants of thymidylate synthase.
J.Mol.Biol., 276, 1998
3DM5
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BU of 3dm5 by Molmil
Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus.
Descriptor: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
Authors:Egea, P.F, Napetschnig, J, Walter, P, Stroud, R.M.
Deposit date:2008-06-30
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structures of SRP54 and SRP19, the two proteins that organize the ribonucleic core of the signal recognition particle from Pyrococcus furiosus.
Plos One, 3, 2008
1JAT
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BU of 1jat by Molmil
Mms2/Ubc13 Ubiquitin Conjugating Enzyme Complex
Descriptor: Ubiquitin-Conjugating Enzyme E2-17.5 KDA, Ubiquitin-Conjugating Enzyme Variant Mms2
Authors:VanDemark, A.P, Hofmann, R.M, Tsui, C, Pickart, C.M, Wolberger, C.
Deposit date:2001-05-31
Release date:2001-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular insights into polyubiquitin chain assembly: crystal structure of the Mms2/Ubc13 heterodimer.
Cell(Cambridge,Mass.), 105, 2001
1JBB
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Ubiquitin Conjugating Enzyme, Ubc13
Descriptor: ubiquitin conjugating enzyme E2-17.5 KDA
Authors:VanDemark, A.P, Hofmann, R.M, Tsui, C, Pickart, C.M, Wolberger, C.
Deposit date:2001-06-03
Release date:2001-06-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insights into polyubiquitin chain assembly: crystal structure of the Mms2/Ubc13 heterodimer.
Cell(Cambridge,Mass.), 105, 2001
1SQG
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BU of 1sqg by Molmil
The crystal structure of the E. coli Fmu apoenzyme at 1.65 A resolution
Descriptor: SUN protein
Authors:Foster, P.G, Nunes, C.R, Greene, P, Moustakas, D, Stroud, R.M.
Deposit date:2004-03-18
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The First Structure of an RNA m5C Methyltransferase, Fmu, Provides Insight into Catalytic Mechanism and Specific Binding of RNA Substrate
Structure, 11, 2003
4HU4
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BU of 4hu4 by Molmil
Crystal structure of EAL domain of the E. coli DosP - dimeric form
Descriptor: Oxygen sensor protein DosP
Authors:Tarnawski, M, Barends, T.R.M, Hartmann, E, Schlichting, I.
Deposit date:2012-11-02
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the catalytic EAL domain of the Escherichia coli direct oxygen sensor.
Acta Crystallogr.,Sect.D, 69, 2013
4HNY
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BU of 4hny by Molmil
Apo N-terminal acetyltransferase complex A
Descriptor: GLYCEROL, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1, ...
Authors:Neubauer, J.L, Immormino, R.M, Dollins, D.E, Endo-Streeter, S.T, Pemble IV, C.W, York, J.D.
Deposit date:2012-10-21
Release date:2014-03-26
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility
To be Published

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