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PDB: 81 results

2M93
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BU of 2m93 by Molmil
Structure of d[TTGGGTGGGCGCGAAGCATTCGCGGGGTGGGT] quadruplex-duplex hybrid
Descriptor: 32-MER DNA
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
2MWZ
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BU of 2mwz by Molmil
Xanthine and 8-oxoguanine in G-quadruplexes: formation of a G G X O tetrad
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*TP*TP*AP*(8OG)P*GP*GP*TP*TP*AP*GP*GP*(3ZO)P*TP*TP*AP*GP*GP*GP*A)-3')
Authors:Cheong, V.V, Heddi, B, Lech, C.J, Phan, A.T.
Deposit date:2014-12-04
Release date:2015-10-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Xanthine and 8-oxoguanine in G-quadruplexes: formation of a GGXO tetrad.
Nucleic Acids Res., 43, 2015
2LPW
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BU of 2lpw by Molmil
human CEB25 minisatellite G-quadruplex
Descriptor: DNA (26-MER)
Authors:Amrane, S, Adrian, M, Heddi, B, Serero, A, Nicolas, A, Mergny, J.L, Phan, A.T.
Deposit date:2012-02-20
Release date:2012-03-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Formation of Pearl-Necklace Monomorphic G-Quadruplexes in the Human CEB25 Minisatellite.
J.Am.Chem.Soc., 134, 2012
2MS9
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BU of 2ms9 by Molmil
Solution structure of a G-quadruplex
Descriptor: DNA (28-MER)
Authors:Chung, W.J, Heddi, B, Schmitt, E, Lim, K.W, Mechulam, Y, Phan, A.T.
Deposit date:2014-07-25
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a left-handed DNA G-quadruplex
Proc.Natl.Acad.Sci.USA, 2015
2N60
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BU of 2n60 by Molmil
G-quadruplexes with (4n-1) guanines in the G-tetrad core: formation of a G-triad water complex and implication for small-molecule binding
Descriptor: DNA (5'-D(*TP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Heddi, B, Martin-Pintado, N, Serimbetov, Z, Kari, T.M, Phan, A.T.
Deposit date:2015-08-08
Release date:2016-06-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:G-quadruplexes with (4n - 1) guanines in the G-tetrad core: formation of a G-triadwater complex and implication for small-molecule binding
Nucleic Acids Res., 44, 2016
2KOW
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BU of 2kow by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by Giardia telomeric repeat d(TAGGG)4 in K+ solution (with G18-to-INO substitution)
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*AP*GP*GP*GP*TP*AP*GP*GP*GP*TP*AP*IP*GP*G)-3')
Authors:Hu, L, Lim, K.W, Bouaziz, S, Phan, A.T.
Deposit date:2009-10-02
Release date:2009-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Giardia Telomeric Sequence d(TAGGG)(4) Forms Two Intramolecular G-Quadruplexes in K(+) Solution: Effect of Loop Length and Sequence on the Folding Topology.
J.Am.Chem.Soc., 131, 2009
2M4P
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BU of 2m4p by Molmil
Solution structure of an intramolecular propeller-type G-quadruplex containing a single bulge
Descriptor: DNA (5'-D(*TP*TP*GP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Mukundan, V.T, Phan, A.T.
Deposit date:2013-02-08
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bulges in G-Quadruplexes: Broadening the Definition of G-Quadruplex-Forming Sequences.
J.Am.Chem.Soc., 135, 2013
2KM3
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BU of 2km3 by Molmil
Structure of an intramolecular G-quadruplex containing a G.C.G.C tetrad formed by human telomeric variant CTAGGG repeats
Descriptor: DNA (5'-D(*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*G)-3')
Authors:Lim, K.W, Alberti, P, Guedin, A, Lacroix, L, Riou, J.F, Royle, N.J, Mergny, J.L, Phan, A.T.
Deposit date:2009-07-17
Release date:2009-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G.C.G.C tetrad
Nucleic Acids Res., 37, 2009
2N4Y
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BU of 2n4y by Molmil
Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome
Descriptor: DNA_(5'-D(*CP*TP*GP*GP*GP*CP*GP*GP*GP*AP*CP*TP*GP*GP*GP*GP*AP*GP*TP*GP*GP*T)-3')
Authors:DeNicola, B, Lech, C.J, Heddi, B, Regmi, S, Frasson, I, Perrone, R, Richter, S.N, Phan, A.T.
Deposit date:2015-07-02
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome.
Nucleic Acids Res., 44, 2016
2KF7
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BU of 2kf7 by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution (with G7-to-BRG substitution)
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2KF8
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BU of 2kf8 by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2LK7
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BU of 2lk7 by Molmil
Monomer-dimer equilibrium for 5'-5' stacking of propeller-type parallel-stranded G-quadruplexes: NMR structural study
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Do, N.Q, Phan, A.T.
Deposit date:2011-10-07
Release date:2012-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Monomer-Dimer Equilibrium for the 5'-5' Stacking of Propeller-Type Parallel-Stranded G-Quadruplexes: NMR Structural Study
Chemistry, 2012
2LE6
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BU of 2le6 by Molmil
Structure of a dimeric all-parallel-stranded G-quadruplex stacked via the 5'-to-5' interface
Descriptor: DNA (5'-D(*GP*IP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Do, N.Q, Lim, K.W, Teo, M.H, Heddi, B, Phan, A.T.
Deposit date:2011-06-10
Release date:2011-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity
Nucleic Acids Res., 2011
2MAY
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BU of 2may by Molmil
Structure of a G-quadruplex containing a single LNA modification
Descriptor: DNA_(5'-D(*TP*TP*GP*LGP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*A)-3')
Authors:Lech, C, Heddi, B, Adrian, M, Li, Z, Phan, A.T.
Deposit date:2013-07-22
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Engineering G4: Towards effective incorporation of locked nucleic acid into G-quadruplexes
To be Published
2M8Y
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BU of 2m8y by Molmil
Structure of d[CGCGAAGCATTCGCG] hairpin
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*GP*CP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
2JSL
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BU of 2jsl by Molmil
Monomeric Human Telomere DNA Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, Form 2 Natural, NMR, 10 Structures
Descriptor: HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V, Phan, A.T, Luu, K.N, Patel, D.J.
Deposit date:2007-07-08
Release date:2008-07-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007
2M18
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BU of 2m18 by Molmil
Structure of stacked G-quadruplex formed by human TERRA sequence in potassium solution
Descriptor: RNA (5'-R(*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3')
Authors:Martadinata, H, Phan, A.T.
Deposit date:2012-11-20
Release date:2013-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Human Telomeric RNA (TERRA): Stacking of Two G-Quadruplex Blocks in K(+) Solution
Biochemistry, 52, 2013
2KYP
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BU of 2kyp by Molmil
Monomeric Human CKIT-2 proto-oncogene promoter quadruplex DNA NMR, 12 structures
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V, Phan, A.T, Patel, D.J.
Deposit date:2010-06-06
Release date:2010-06-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
7EUC
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BU of 7euc by Molmil
Parallel G-quadruplex structure
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*GP*GP*T)-3'), ...
Authors:Winnerdy, F.R, Devi, G, Ang, J.C.Y, Lim, K.W, Phan, A.T.
Deposit date:2021-05-17
Release date:2022-03-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Four-Layered Intramolecular Parallel G-Quadruplex with Non-Nucleotide Loops: An Ultra-Stable Self-Folded DNA Nano-Scaffold.
Acs Nano, 16, 2022
2MBJ
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BU of 2mbj by Molmil
Structure of an antiparallel (2+2) G-quadruplex formed by human telomeric repeats in Na+ solution (with G22-to-BrG substitution)
Descriptor: DNA_(27-MER)
Authors:Lim, K.W, Ng, V.C.M, Martin-Pintado, N, Heddi, B, Phan, A.T.
Deposit date:2013-08-02
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity.
Nucleic Acids Res., 41, 2013
2MGN
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BU of 2mgn by Molmil
Solution structure of a G-quadruplex bound to the bisquinolinium compound Phen-DC3
Descriptor: 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3', N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Chung, W.J, Heddi, B, Hamon, F, Teulade-Fichou, M.P, Phan, A.T.
Deposit date:2013-11-01
Release date:2014-01-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a G-quadruplex Bound to the Bisquinolinium Compound Phen-DC3.
Angew.Chem.Int.Ed.Engl., 53, 2014
2N21
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BU of 2n21 by Molmil
Solution structure of complex between DNA G-quadruplex and G-quadruplex recognition domain of RHAU
Descriptor: ATP-dependent RNA helicase DHX36, DNA (5'-D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Heddi, B, Cheong, V.V, Martadinata, H, Phan, A.T.
Deposit date:2015-04-25
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
2KYO
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BU of 2kyo by Molmil
Dimeric human ckit-2 proto-oncogene promoter quadruplex DNA NMR, 10 structures
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V, Phan, A.T, Patel, D.J.
Deposit date:2010-06-05
Release date:2010-06-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
2N16
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BU of 2n16 by Molmil
Solution structure of G-quadruplex recognition domain of RHAU
Descriptor: ATP-dependent RNA helicase DHX36
Authors:Heddi, B, Cheong, V.V, Martadinata, H, Phan, A.T.
Deposit date:2015-03-23
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
2LD8
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BU of 2ld8 by Molmil
Structure of Human Telomeric DNA in Crowded Solution
Descriptor: Human Telomeric DNA
Authors:Heddi, B, Phan, A.T.
Deposit date:2011-05-17
Release date:2011-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Human Telomeric DNA in Crowded Solution
J.Am.Chem.Soc., 2011

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