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PDB: 45697 件

7NAR
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Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
登録日2021-01-25
公開日2021-12-08
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
8CTZ
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12-mer DNA structure of ExBIM & O6Me-G bound to RNase-H
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*CP*GP*CP*(6OG)P*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3'), ...
著者Pallan, P.S, Egli, M.
登録日2022-05-16
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Conformation and Pairing Properties of an O 6 -Methyl-2'-deoxyguanosine-Directed Benzimidazole Nucleoside Analog in Duplex DNA.
Chem.Res.Toxicol., 35, 2022
7PKZ
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Vault structure in committed conformation
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-27
公開日2022-03-16
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
7ALN
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Cryo-EM structure of the divergent actomyosin complex from Plasmodium falciparum Myosin A in the Rigor state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-1, Jasplakinolide, ...
著者Robert-Paganin, J, Xu, X.-P, Swift, M.F, Auguin, D, Robblee, J.P, Lu, H, Fagnant, P.M, Krementsova, E.B, Trybus, K.M, Houdusse, A, Volkmann, N, Hanein, D.
登録日2020-10-06
公開日2021-04-28
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献The actomyosin interface contains an evolutionary conserved core and an ancillary interface involved in specificity.
Nat Commun, 12, 2021
7Q4O
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Substrate-bound A-like U2 snRNP
分子名称: BPS oligo, PHD finger-like domain-containing protein 5A, Splicing factor 3A subunit 2, ...
著者Tholen, J, Galej, W.P.
登録日2021-11-01
公開日2022-03-30
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural basis of branch site recognition by the human spliceosome.
Science, 375, 2022
7N85
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BU of 7n85 by Molmil
Inner ring spoke from the isolated yeast NPC
分子名称: Nucleoporin ASM4, Nucleoporin NIC96, Nucleoporin NSP1, ...
著者Akey, C.W, Rout, M.P, Ouch, C, Echevarria, I, Fernandez-Martinez, J, Nudelman, I.
登録日2021-06-13
公開日2022-01-26
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Comprehensive structure and functional adaptations of the yeast nuclear pore complex.
Cell, 185, 2022
7Q4P
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BU of 7q4p by Molmil
U2 snRNP after ATP-dependent remodelling
分子名称: PHD finger-like domain-containing protein 5A, Splicing factor 3A subunit 2, Splicing factor 3A subunit 3, ...
著者Tholen, J, Galej, W.P.
登録日2021-11-01
公開日2022-03-30
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural basis of branch site recognition by the human spliceosome.
Science, 375, 2022
5ME1
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BU of 5me1 by Molmil
Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Lopez-Alonso, J.P, Fabbretti, A, Kaminishi, T, Iturrioz, I, Brandi, L, Gil Carton, D, Gualerzi, C, Fucini, P, Connell, S.
登録日2016-11-14
公開日2017-01-11
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Structure of a 30S pre-initiation complex stalled by GE81112 reveals structural parallels in bacterial and eukaryotic protein synthesis initiation pathways.
Nucleic Acids Res., 45, 2017
7AIN
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Structure of Human Potassium Chloride Transporter KCC3 S45D/T940D/T997D in NaCl (Reference Map)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 2 of Solute carrier family 12 member 6, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Chi, G, Man, H, Ebenhoch, R, Reggiano, G, Pike, A.C.W, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Bohstedt, T, Singh, N.K, Abrusci, P, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, DiMaio, F, Duerr, K.L, Structural Genomics Consortium (SGC)
登録日2020-09-28
公開日2021-06-02
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
7Q37
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BU of 7q37 by Molmil
Crystal structure of proton pump MAR rhodopsin pressurized with krypton
分子名称: Bacteriorhodopsin, EICOSANE, HEXANE, ...
著者Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
登録日2021-10-27
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
7PNW
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BU of 7pnw by Molmil
Mouse mitochondrial ribosome small subunit lacking m5U modification
分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
著者Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A.
登録日2021-09-08
公開日2022-06-15
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022
7PNV
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BU of 7pnv by Molmil
Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Mettl15
分子名称: 12S mitochondrial rRNA, 12S rRNA N4-methylcytidine methyltransferase, 28S ribosomal protein S10, ...
著者Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A.
登録日2021-09-08
公開日2022-06-15
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022
7PPM
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BU of 7ppm by Molmil
SHP2 catalytic domain in complex with IRS1 (889-901) phosphopeptide (pSer-892, pTyr-896)
分子名称: GLYCEROL, Insulin receptor substrate 1, Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11
著者Sok, P, Zeke, A, Remenyi, A.
登録日2021-09-14
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling.
Nat Commun, 13, 2022
7PPL
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BU of 7ppl by Molmil
SHP2 catalytic domain in complex with IRS1 (625-639) phosphopeptide (pTyr-632, pSer-636)
分子名称: ETHANOL, GLYCEROL, Insulin receptor substrate 1, ...
著者Sok, P, Zeke, A, Remenyi, A.
登録日2021-09-14
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling.
Nat Commun, 13, 2022
7PMQ
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BU of 7pmq by Molmil
DEAD-box helicase DbpA in the active conformation bound to a hairpin loop RNA and ADP/BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DbpA, BERYLLIUM TRIFLUORIDE ION, ...
著者Wurm, J.P.
登録日2021-09-02
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural basis for RNA-duplex unwinding by the DEAD-box helicase DbpA.
Rna, 29, 2023
8FY2
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BU of 8fy2 by Molmil
E3:PROTAC:target ternary complex structure (VCB/WH244/BCL-2)
分子名称: Apoptosis regulator Bcl-2, Elongin-B, Elongin-C, ...
著者Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Ruben, E, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D, Olsen, S.K.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
8FY1
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BU of 8fy1 by Molmil
E3:PROTAC:target ternary complex structure (VCB/753b/BCL-2)
分子名称: Apoptosis regulator Bcl-2, Elongin-B, Elongin-C, ...
著者Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D, Olsen, S.K.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
8FY0
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BU of 8fy0 by Molmil
E3:PROTAC:target ternary complex structure (VCB/753b/BCL-xL)
分子名称: Bcl-2-like protein 1, CACODYLIC ACID, Elongin-B, ...
著者Olsen, S.K, Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
6ZQ5
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Crystal structure of Chaetomium thermophilum Glycerol Kinase in P2221 space group
分子名称: 1,2-ETHANEDIOL, Glycerol kinase-like protein
著者Wilk, P, Wator, E, Malecki, P, Grudnik, P.
登録日2020-07-09
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural Characterization of Glycerol Kinase from the Thermophilic Fungus Chaetomium thermophilum .
Int J Mol Sci, 21, 2020
7PET
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BU of 7pet by Molmil
The 4x177 nucleosome array containing H1
分子名称: DNA (702-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7OFT
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BU of 7oft by Molmil
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with p-hydroxybenzaldehyde
分子名称: CHLORIDE ION, P-HYDROXYBENZALDEHYDE, POTASSIUM ION, ...
著者Srinivasan, V, Werner, N, Falke, S, Guenther, S, Reinke, P, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Ewert, W, Sprenger, J, Lieske, J, Koua, F, Ginn, H, Lane, T.J, Wolf, M, Yefanov, O, Gelisio, L, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C.
登録日2021-05-05
公開日2021-05-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease.
Commun Biol, 5, 2022
6PJJ
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Human PRPF4B bound to benzothiophene inhibitor 224
分子名称: 1,2-ETHANEDIOL, 4-(5-{[(3-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide, PHOSPHATE ION, ...
著者Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
登録日2019-06-28
公開日2019-08-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献to be published
To Be Published
7PX1
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Conotoxin from Conus mucronatus
分子名称: CADMIUM ION, Conus mucronatus, IODIDE ION
著者Mueller, E, Hackney, C.M, Ellgaard, L, Morth, J.P.
登録日2021-10-07
公開日2022-11-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献A previously unrecognized superfamily of macro-conotoxins includes an inhibitor of the sensory neuron calcium channel Cav2.3.
Plos Biol., 21, 2023
7B4X
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Notum complex with ARUK3002697
分子名称: 1,2-ETHANEDIOL, 6-(4-methylphenyl)sulfanyl-2~{H}-[1,2,4]triazolo[4,3-b]pyridazin-3-one, DIMETHYL SULFOXIDE, ...
著者Jones, E.Y, Fish, P.
登録日2020-12-02
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
7PX2
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Conotoxin Mu8.1 from Conus mucronatus
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Conotoxin Mu8.1
著者Mueller, E, Hackney, C, Ellgaard, L, Morth, J.P.
登録日2021-10-07
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献A previously unrecognized superfamily of macro-conotoxins includes an inhibitor of the sensory neuron calcium channel Cav2.3.
Plos Biol., 21, 2023

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件を2024-07-10に公開中

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