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PDB: 17204 results

6WV5
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Human VKOR C43S mutant with vitamin K1 epoxide
Descriptor: (2R,3R)-2-hydroxy-3-methyl-2-[(2E,7S)-3,7,11,15-tetramethylhexadec-2-en-1-yl]-2,3-dihydronaphthalene-1,4-dione, Vitamin K epoxide reductase Cys43Ser mutant, termini restrained by green fluorescent protein
Authors:Liu, S, Sukumar, N, Li, W.
Deposit date:2020-05-05
Release date:2020-11-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation.
Science, 371, 2021
1R5Q
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Crystal Structure Analysis of Kai A from PCC7120
Descriptor: circadian oscillation regulator
Authors:Garces, R.G, Wu, N, Gillon, W, Pai, E.F.
Deposit date:2003-10-12
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC
Embo J., 23, 2004
1R5W
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Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T-cell activation
Descriptor: H-2 class II histocompatibility antigen, E-K alpha chain, MHC H2-IE-beta, ...
Authors:Krogsgaard, M, Prado, N, Adams, E, He, X, Chow, D.C, Wilson, D.B, Garcia, K.C, Davis, M.M.
Deposit date:2003-10-13
Release date:2004-03-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T cell activation
Mol.Cell, 12, 2003
1R1K
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Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to ponasterone A
Descriptor: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, Ecdysone receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
Authors:Billas, I.M.L, Iwema, T, Garnier, J.-M, Mitschler, A, Rochel, N, Moras, D, Structural Proteomics in Europe (SPINE)
Deposit date:2003-09-24
Release date:2003-11-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural adaptability in the ligand-binding pocket of the ecdysone hormone receptor.
Nature, 426, 2003
1BJ5
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HUMAN SERUM ALBUMIN COMPLEXED WITH MYRISTIC ACID
Descriptor: HUMAN SERUM ALBUMIN, MYRISTIC ACID
Authors:Curry, S, Mandelkow, H, Brick, P, Franks, N.
Deposit date:1998-07-02
Release date:1998-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human serum albumin complexed with fatty acid reveals an asymmetric distribution of binding sites.
Nat.Struct.Biol., 5, 1998
8BF1
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High-resolution structure of unliganded PPAR gamma in complex with the peptide PGC-1 alpha
Descriptor: Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Useini, A, Straeter, N.
Deposit date:2022-10-23
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural basis of the activation of PPAR gamma by the plasticizer metabolites MEHP and MINCH.
Environ Int, 173, 2023
5CUA
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Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 1-Acetyl-4-(4-hydroxyphenyl)piperazine (SGC - Diamond I04-1 fragment screening)
Descriptor: 1,2-ETHANEDIOL, 1-[4-(4-hydroxyphenyl)piperazin-1-yl]ethanone, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2015-07-24
Release date:2015-09-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 1-Acetyl-4-(4-hydroxyphenyl)piperazine (SGC - Diamond I04-1 fragment screening)
To be published
6WHR
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GluN1b-GluN2B NMDA receptor in non-active 2 conformation at 4 angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
Authors:Chou, T, Tajima, N, Furukawa, H.
Deposit date:2020-04-08
Release date:2020-08-05
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Structural Basis of Functional Transitions in Mammalian NMDA Receptors.
Cell, 182, 2020
1BQF
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GROWTH-BLOCKING PEPTIDE (GBP) FROM PSEUDALETIA SEPARATA
Descriptor: PROTEIN (GROWTH-BLOCKING PEPTIDE)
Authors:Aizawa, T, Fujitani, N, Hayakawa, Y, Ohnishi, A, Ohkubo, T, Kwano, K, Hikichi, K, Nitta, K.
Deposit date:1998-08-09
Release date:1998-12-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an insect growth factor, growth-blocking peptide.
J.Biol.Chem., 274, 1999
8BFF
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Human PPARgamma in complex with MINCH bound to the AF-2 sub-pocket
Descriptor: (1~{S},2~{R})-2-[(4~{R})-4-methylheptoxy]carbonylcyclohexane-1-carboxylic acid, Peroxisome proliferator-activated receptor gamma
Authors:Useini, A, Straeter, N.
Deposit date:2022-10-25
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of the activation of PPAR gamma by the plasticizer metabolites MEHP and MINCH.
Environ Int, 173, 2023
1SM2
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Crystal structure of the phosphorylated Interleukin-2 tyrosine kinase catalytic domain
Descriptor: STAUROSPORINE, Tyrosine-protein kinase ITK/TSK
Authors:Brown, K, Long, J.M, Vial, S.C.M, Dedi, N, Dunster, N.J, Renwick, S.B, Tanner, A.J, Frantz, J.D, Fleming, M.A, Cheetham, G.M.T.
Deposit date:2004-03-08
Release date:2004-07-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of interleukin-2 tyrosine kinase and their implications for the design of selective inhibitors.
J.Biol.Chem., 279, 2004
8BF2
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Human PPARgamma in complex with MEHP bound to the AF-2 and omega sub-pockets
Descriptor: 2-[(2~{S})-2-ethylhexoxy]carbonylbenzoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Useini, A, Straeter, N.
Deposit date:2022-10-23
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis of the activation of PPAR gamma by the plasticizer metabolites MEHP and MINCH.
Environ Int, 173, 2023
1SIU
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KUMAMOLISIN-AS E78H MUTANT
Descriptor: CALCIUM ION, SULFATE ION, kumamolisin-As
Authors:Li, M, Wlodawer, A, Gustchina, A, Tsuruoka, N, Ashida, M, Minakata, H, Oyama, H, Oda, K, Nishino, T, Nakayama, T.
Deposit date:2004-03-01
Release date:2004-03-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystallographic and biochemical investigations of kumamolisin-As, a serine-carboxyl peptidase with collagenase activity
J.Biol.Chem., 279, 2004
6CBC
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Crystal structure of an N-terminal fragment of Vps13.
Descriptor: Vacuolar protein sorting-associated protein
Authors:Kumar, N, Horenkamp, F.A, Reinisch, K.M.
Deposit date:2018-02-02
Release date:2018-08-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:VPS13A and VPS13C are lipid transport proteins differentially localized at ER contact sites.
J. Cell Biol., 217, 2018
5D4S
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Crystal Structure of AraR(DBD) in complex with operator ORX1
Descriptor: Arabinose metabolism transcriptional repressor, DNA (5'-D(*AP*AP*AP*TP*AP*CP*AP*TP*AP*CP*GP*TP*AP*CP*AP*AP*AP*TP*AP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*TP*AP*TP*GP*TP*AP*TP*T)-3')
Authors:Jain, D, Narayanan, N, Nair, D.T.
Deposit date:2015-08-08
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.
J.Biol.Chem., 291, 2016
1C1M
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BU of 1c1m by Molmil
PORCINE ELASTASE UNDER XENON PRESSURE (8 BAR)
Descriptor: CALCIUM ION, PROTEIN (PORCINE ELASTASE), SULFATE ION, ...
Authors:Prange, T, Schiltz, M, Pernot, L, Colloc'h, N, Longhi, S, Bourguet, W, Fourme, R.
Deposit date:1999-07-22
Release date:1999-07-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Exploring hydrophobic sites in proteins with xenon or krypton.
Proteins, 30, 1998
1SKU
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BU of 1sku by Molmil
E. coli Aspartate Transcarbamylase 240's Loop Mutant (K244N)
Descriptor: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, MALONATE ION, ...
Authors:Alam, N, Stieglitz, K.A, Caban, M.D, Gourinath, S, Tsuruta, H, Kantrowitz, E.R.
Deposit date:2004-03-05
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:240s Loop Interactions Stabilize the T State of Escherichia coli Aspartate Transcarbamoylase.
J.Biol.Chem., 279, 2004
4IRB
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BU of 4irb by Molmil
Crystal Structure of Vaccinia Virus Uracil DNA Glycosylase Mutant del171-172D4
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Schormann, N, Zhukovskaya, N, Sartmatova, D, Nuth, M, Ricciardi, R.P, Chattopadhyay, D.
Deposit date:2013-01-14
Release date:2014-02-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutations at the dimer interface affect both function and structure of the Vaccinia virus uracil DNA glycosylase
To be Published
5D4R
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Crystal Structure of AraR(DBD) in complex with operator ORE1
Descriptor: Arabinose metabolism transcriptional repressor, DNA (5'-D(*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*TP*AP*CP*TP*AP*AP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*TP*AP*GP*TP*AP*CP*GP*TP*AP*CP*AP*AP*AP*TP*A)-3')
Authors:Jain, D, Narayanan, N, Nair, D.T.
Deposit date:2015-08-08
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.
J.Biol.Chem., 291, 2016
4ITC
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BU of 4itc by Molmil
Crystal Structure Analysis of the K1 Cleaved Adhesin domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis W83
Descriptor: CALCIUM ION, GLYCEROL, GUANIDINE, ...
Authors:Ganuelas, L.A, Li, N, Hunter, N, Collyer, C.A.
Deposit date:2013-01-18
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The lysine gingipain adhesin domains from Porphyromonas gingivalis interact with erythrocytes and albumin: Structures correlate to function.
Eur J Microbiol Immunol (Bp), 3, 2013
1SR0
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BU of 1sr0 by Molmil
Crystal structure of signalling protein from sheep(SPS-40) at 3.0A resolution using crystal grown in the presence of polysaccharides
Descriptor: beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, signal processing protein
Authors:Srivastava, D.B, Ethayathulla, A.S, Singh, N, Kumar, J, Sharma, S, Singh, T.P.
Deposit date:2004-03-22
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structure of signalling protein from sheep(SPS-40) at 3.0A resolution using crystal grown in the presence of polysaccharides
To be Published
5EL7
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Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G.
Deposit date:2015-11-04
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Nat Commun, 7, 2016
1SR9
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Crystal Structure of LeuA from Mycobacterium tuberculosis
Descriptor: 2-isopropylmalate synthase, 3-METHYL-2-OXOBUTANOIC ACID, CHLORIDE ION, ...
Authors:Koon, N, Squire, C.J, Baker, E.N.
Deposit date:2004-03-22
Release date:2004-05-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of LeuA from Mycobacterium tuberculosis, a key enzyme in leucine biosynthesis
Proc.Natl.Acad.Sci.USA, 101, 2004
6VAQ
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BU of 6vaq by Molmil
Crystal structure of glucose-6-phosphate dehydrogenase V394L mutant in complex with catalytic NADP+
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Horikoshi, N, Mochly-Rosen, D, Wakatsuki, S.
Deposit date:2019-12-17
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.
Proc.Natl.Acad.Sci.USA, 118, 2021
7EHZ
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Structure of human NNMT in complex with macrocyclic peptide 2
Descriptor: Nicotinamide N-methyltransferase, macrocyclic peptide 2
Authors:Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
Deposit date:2021-03-30
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021

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