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PDB: 51586 results

7ZEH
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Human cytosolic 5' nucleotidase IIIB in complex with 3,4-diF-Bn7Guanine
Descriptor: 1,2-ETHANEDIOL, 7-methylguanosine phosphate-specific 5'-nucleotidase, D-ribulose, ...
Authors:Kubacka, D, Kozarski, M, Baranowski, M.R, Wojcik, R, Jemielity, J, Kowalska, J, Basquin, J.
Deposit date:2022-03-31
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Substrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.
Pharmaceuticals, 15, 2022
5H4Y
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Crystal structure of human synaptotagmin 5 C2A domain
Descriptor: ACETATE ION, CALCIUM ION, Synaptotagmin-5
Authors:Qiu, X, Gao, Y, Teng, M, Niu, L.
Deposit date:2016-11-02
Release date:2016-11-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of Ca(2+)-binding pocket of synaptotagmin 5 C2A domain
Int. J. Biol. Macromol., 95, 2017
4YWA
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BU of 4ywa by Molmil
Structural Insight into Divalent Galactoside Binding to Pseudomonas aeruginosa lectin LecA
Descriptor: (2R,3R,4S,5R,6R,2'R,3'R,4'S,5'R,6'R)-2,2'-([(2R,3R,4S,5S,6S)-3,4-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2,5-diyl]bis{1H-1,2,3-triazole-1,4-diyl[(2S,3R,4S,5S,6S)-3,4-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2,5-diyl]-1H-1,2,3-triazole-1,4-diylmethanediyloxy})bis[6-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol], CALCIUM ION, PA-I galactophilic lectin
Authors:Visini, R, Jin, X, Michaud, G, Bergmann, M, Gillon, E, Imberty, A, Stocker, A, Darbre, T, Pieters, R, Reymond, J.-L.
Deposit date:2015-03-20
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.192 Å)
Cite:Structural Insight into Multivalent Galactoside Binding to Pseudomonas aeruginosa Lectin LecA.
Acs Chem.Biol., 10, 2015
4YX2
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BU of 4yx2 by Molmil
Crystal structure of Bovine prion protein complexed with POM1 FAB
Descriptor: Major prion protein, POM1 FAB HEAVY CHAIN, POM1 FAB LIGHT CHAIN
Authors:Baral, P.K, Swayampakula, M, James, M.N.G.
Deposit date:2015-03-22
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:X-ray structural and molecular dynamical studies of the globular domains of cow, deer, elk and Syrian hamster prion proteins.
J.Struct.Biol., 192, 2015
4YVQ
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BU of 4yvq by Molmil
Crystal Structure of FLU-TPR in Complex with the C-terminal Region of GluTR
Descriptor: Glutamyl-tRNA reductase 1, chloroplastic, Protein FLUORESCENT IN BLUE LIGHT
Authors:Zhang, M, Zhang, F, Liu, L.
Deposit date:2015-03-20
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase.
J.Biol.Chem., 290, 2015
4YWP
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BU of 4ywp by Molmil
Sucrose Binding Site in genetically engineered Carbonic anhydrase IX
Descriptor: Carbonic anhydrase 2, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Pinard, M.A, Aggarwal, M.
Deposit date:2015-03-20
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A sucrose-binding site provides a lead towards an isoform-specific inhibitor of the cancer-associated enzyme carbonic anhydrase IX.
Acta Crystallogr F Struct Biol Commun, 71, 2015
7Z52
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BU of 7z52 by Molmil
Human NEXT dimer - focused reconstruction of the single MTR4
Descriptor: Exosome RNA helicase MTR4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*UP*UP*UP*UP*U)-3'), ...
Authors:Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E.
Deposit date:2022-03-07
Release date:2022-06-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome.
Mol.Cell, 82, 2022
7Z4Z
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Human NEXT dimer - focused reconstruction of the dimerization module
Descriptor: Exosome RNA helicase MTR4, Zinc finger CCHC domain-containing protein 8
Authors:Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E.
Deposit date:2022-03-06
Release date:2022-06-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome.
Mol.Cell, 82, 2022
5H0Y
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BU of 5h0y by Molmil
Crystal structure of H88Y mutated human transthyretin
Descriptor: CHLORIDE ION, SULFATE ION, Transthyretin
Authors:Yokoyama, T, Hanawa, Y, Obita, T, Mizuguchi, M.
Deposit date:2016-10-07
Release date:2017-06-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stability and crystal structures of His88 mutant human transthyretins
FEBS Lett., 591, 2017
4YZS
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BU of 4yzs by Molmil
Crystal structures reveal transient PERK luminal domain tetramerization in ER stress signaling
Descriptor: Eukaryotic translation initiation factor 2-alpha kinase 3, TUNGSTEN ION
Authors:Carrara, M, Prischi, F, Ali, M.M.U.
Deposit date:2015-03-25
Release date:2015-05-13
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Crystal structures reveal transient PERK luminal domain tetramerization in endoplasmic reticulum stress signaling.
Embo J., 34, 2015
5H12
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BU of 5h12 by Molmil
Crystal structure of Deep Vent DNA Polymerase
Descriptor: Deep Vent DNA Polymerase
Authors:Hikida, Y, Kimoto, M, Hirao, I, Yokoyama, S.
Deposit date:2016-10-07
Release date:2017-01-25
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Crystal structure of Deep Vent DNA polymerase.
Biochem. Biophys. Res. Commun., 483, 2017
7Z4Y
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BU of 7z4y by Molmil
Human NEXT dimer - overall reconstruction of the core complex
Descriptor: Exosome RNA helicase MTR4, Zinc finger CCHC domain-containing protein 8
Authors:Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E.
Deposit date:2022-03-06
Release date:2022-06-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome.
Mol.Cell, 82, 2022
4YXL
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BU of 4yxl by Molmil
Crystal structure of Syrian hamster prion protein complexed with POM1 FAB
Descriptor: Major prion protein, POM1 FAB HEAVY CHAIN, POM1 FAB LIGHT CHAIN, ...
Authors:Baral, P.K, Swayampakula, M, James, M.N.G.
Deposit date:2015-03-23
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:X-ray structural and molecular dynamical studies of the globular domains of cow, deer, elk and Syrian hamster prion proteins.
J.Struct.Biol., 192, 2015
5H45
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BU of 5h45 by Molmil
Crystal structure of the C-terminal Lon protease-like domain of Thermus thermophilus RadA/Sms
Descriptor: DNA repair protein RadA
Authors:Inoue, M, Fukui, K, Fujii, Y, Nakagawa, N, Yano, T, Kuramitsu, S, Masui, R.
Deposit date:2016-10-30
Release date:2017-05-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair.
J. Biol. Chem., 292, 2017
4YZM
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BU of 4yzm by Molmil
Humanized Roco4 bound to LRRK2-In1
Descriptor: 2-[(2-methoxy-4-{[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl}phenyl)amino]-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, MAGNESIUM ION, Probable serine/threonine-protein kinase roco4
Authors:Gilsbach, B.K, Messias, A.C, Ito, G, Sattler, M, Alessi, D.R, Wittinghofer, A, Kortholt, A.
Deposit date:2015-03-25
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Characterization of LRRK2 Inhibitors.
J.Med.Chem., 58, 2015
5G1W
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BU of 5g1w by Molmil
Apo Structure of Linalool Dehydratase-Isomerase
Descriptor: 1,2-ETHANEDIOL, LINALOOL DEHYDRATASE/ISOMERASE, METHYLMALONIC ACID
Authors:Chambers, S, Hau, A, Man, H, Omar, M, Turkenburg, J.P, Grogan, G.
Deposit date:2016-03-30
Release date:2017-01-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural and functional insights into asymmetric enzymatic dehydration of alkenols.
Nat. Chem. Biol., 13, 2017
7Z4M
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BU of 7z4m by Molmil
Plasmodium falciparum pyruvate kinase complexed with Mg2+ and K+
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
5GJL
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BU of 5gjl by Molmil
Solution structure of SUMO from Plasmodium falciparum
Descriptor: Uncharacterized protein
Authors:Singh, J.S, Shukla, V.K, Gujrati, M, Mishra, R.K, Kumar, A.
Deposit date:2016-06-30
Release date:2017-08-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, dynamics and interaction study of SUMO from Plasmodium falciparum
To Be Published
5GGM
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BU of 5ggm by Molmil
The NMR structure of calmodulin in CTAB reverse micelles
Descriptor: CALCIUM ION, Calmodulin, TERBIUM(III) ION
Authors:Xu, G, Cheng, K, Wu, Q, Liu, M, Li, C.
Deposit date:2016-06-16
Release date:2016-09-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR structure of calmodulin in CTAB reverse micelles
To Be Published
7Z4R
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BU of 7z4r by Molmil
Plasmodium falciparum pyruvate kinase mutant - C343A
Descriptor: MAGNESIUM ION, POTASSIUM ION, Pyruvate kinase
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
4Z2R
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BU of 4z2r by Molmil
Crystal structure of 2-hydroxybiphenyl 3-monooxygenase from Pseudomonas azelaica
Descriptor: 2-hydroxybiphenyl-3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kanteev, M, Bregman-Cohen, A, Fishman, A.
Deposit date:2015-03-30
Release date:2015-08-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A crystal structure of 2-hydroxybiphenyl 3-monooxygenase with bound substrate provides insights into the enzymatic mechanism.
Biochim.Biophys.Acta, 1854, 2015
7Z4N
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BU of 7z4n by Molmil
Plasmodium falciparum pyruvate kinase complexed with pyruvate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022
2LQK
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BU of 2lqk by Molmil
NMR solution structure of the N-terminal domain of the CdnL protein from Thermus thermophilus
Descriptor: Transcriptional regulator
Authors:Jimenez, M, Padmanabhan, S.
Deposit date:2012-03-09
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: N-terminal domain of Thermus thermophilus CdnL.
J.Biomol.Nmr, 53, 2012
4Z3W
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BU of 4z3w by Molmil
Active site complex BamBC of Benzoyl Coenzyme A reductase in complex with 1,5 Dienoyl-CoA
Descriptor: 1,5 Dienoyl-CoA, Benzoyl-CoA reductase, putative, ...
Authors:Weinert, T, Kung, J, Weidenweber, S, Huwiler, S, Boll, M, Ermler, U.
Deposit date:2015-04-01
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Structural basis of enzymatic benzene ring reduction.
Nat.Chem.Biol., 11, 2015
7Z4Q
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BU of 7z4q by Molmil
Plasmodium falciparum pyruvate kinase mutant - C49A
Descriptor: MAGNESIUM ION, Pyruvate kinase
Authors:Dillenberger, M, Rahlfs, S, Becker, K, Fritz-Wolf, K.
Deposit date:2022-03-04
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent role of cysteine residues C49 and C343 in regulating Plasmodium falciparum pyruvate kinase activity.
Structure, 30, 2022

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