Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 513 件

1LNU
DownloadVisualize
BU of 1lnu by Molmil
CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IAb BOUND TO EALPHA3K PEPTIDE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 class II histocompatibility antigen, A beta chain, ...
著者Liu, X, Dai, S, Crawford, F, Fruge, R, Marrack, P, Kappler, J.
登録日2002-05-03
公開日2002-08-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Alternate interactions define the binding of peptides to the MHC molecule IA(b).
Proc.Natl.Acad.Sci.USA, 99, 2002
2PKY
DownloadVisualize
BU of 2pky by Molmil
The Effect of Deuteration on Protein Structure A High Resolution Comparison of Hydrogenous and Perdeuterated Haloalkane Dehalogenase
分子名称: Haloalkane dehalogenase
著者Liu, X, Hanson, L, Langan, P, Viola, R.E.
登録日2007-04-18
公開日2007-09-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The effect of deuteration on protein structure: a high-resolution comparison of hydrogenous and perdeuterated haloalkane dehalogenase.
Acta Crystallogr.,Sect.D, 63, 2007
3TGV
DownloadVisualize
BU of 3tgv by Molmil
Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
分子名称: BENZOIC ACID, Heme-binding protein HutZ
著者Liu, X, Gong, J, Wang, Z, Du, Q, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
登録日2011-08-17
公開日2012-08-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
To be Published
4EEZ
DownloadVisualize
BU of 4eez by Molmil
Crystal Structure of Lactococcus lactis Alcohol Dehydrogenase variant RE1
分子名称: Alcohol dehydrogenase 1, TETRAETHYLENE GLYCOL, ZINC ION
著者Liu, X, Bastian, S, Snow, C.D, Brustad, E.M, Saleski, T, Xu, J.H, Meinhold, P, Arnold, F.H.
登録日2012-03-28
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided engineering of Lactococcus lactis alcohol dehydrogenase LlAdhA for improved conversion of isobutyraldehyde to isobutanol.
J.Biotechnol., 164, 2012
4EEX
DownloadVisualize
BU of 4eex by Molmil
Crystal Structure of Lactococcus lactis Alcohol Dehydrogenase
分子名称: Alcohol dehydrogenase 1, TETRAETHYLENE GLYCOL, ZINC ION
著者Liu, X, Bastian, S, Snow, C.D, Brustad, E.M, Saleski, T, Xu, J.H, Meinhold, P, Arnold, F.H.
登録日2012-03-28
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided engineering of Lactococcus lactis alcohol dehydrogenase LlAdhA for improved conversion of isobutyraldehyde to isobutanol.
J.Biotechnol., 164, 2012
6NWL
DownloadVisualize
BU of 6nwl by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with hydrocortisone and PGC1a coregulator fragment
分子名称: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Liu, X, Ortlund, E.A.
登録日2019-02-06
公開日2019-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.595 Å)
主引用文献First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
6NWK
DownloadVisualize
BU of 6nwk by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with dexamethasone and PGC1a coregulator fragment
分子名称: ACETYL GROUP, DEXAMETHASONE, DIMETHYL SULFOXIDE, ...
著者Liu, X, Ortlund, E.A.
登録日2019-02-06
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
7U1A
DownloadVisualize
BU of 7u1a by Molmil
RFC:PCNA bound to dsDNA with a ssDNA gap of six nucleotides
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA - Primer, DNA - Template, ...
著者Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
登録日2022-02-20
公開日2022-07-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
7BQY
DownloadVisualize
BU of 7bqy by Molmil
THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE IN COMPLEX WITH AN INHIBITOR N3 at 1.7 angstrom
分子名称: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
著者Liu, X, Zhang, B, Jin, Z, Yang, H, Rao, Z.
登録日2020-03-26
公開日2020-04-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Mprofrom SARS-CoV-2 and discovery of its inhibitors.
Nature, 582, 2020
4UEI
DownloadVisualize
BU of 4uei by Molmil
Solution structure of the sterol carrier protein domain 2 of Helicoverpa armigera
分子名称: STEROL CARRIER PROTEIN 2/3-OXOACYL-COA THIOLASE
著者Liu, X, Ma, H, Yan, X, Hong, H, Peng, J, Peng, R.
登録日2014-12-18
公開日2015-12-30
最終更新日2019-10-23
実験手法SOLUTION NMR
主引用文献NMR Structure and Function of Helicoverpa Armigera Sterol Carrier Protein-2, an Important Insecticidal Target from the Cotton Bollworm.
Sci.Rep., 5, 2015
6E67
DownloadVisualize
BU of 6e67 by Molmil
Structure of beta2 adrenergic receptor fused to a Gs peptide
分子名称: 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Beta-2 adrenergic receptor,Endolysin,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Beta-2 adrenergic receptor chimera
著者Liu, X, Xu, X, Hilger, D, Tiemann, J, Liu, H, Du, Y, Hirata, K, Sun, X, Guixa-Gonzalez, R, Mathiesen, J, Hildebrand, P, Kobilka, B.
登録日2018-07-24
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural Insights into the Process of GPCR-G Protein Complex Formation.
Cell, 177, 2019
8DQL
DownloadVisualize
BU of 8dql by Molmil
CryoEM structure of IglD
分子名称: Secretion system protein
著者Liu, X, Clemens, D, Lee, B, Yang, X, Zhou, H, Horwitz, M.
登録日2022-07-19
公開日2022-08-17
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Atomic Structure of IglD Demonstrates Its Role as a Component of the Baseplate Complex of the Francisella Type VI Secretion System.
Mbio, 13, 2022
5MV2
DownloadVisualize
BU of 5mv2 by Molmil
Crystal structure of the E protein of the Japanese encephalitis live attenuated vaccine virus
分子名称: E protein
著者Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J.
登録日2017-01-14
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism.
Protein Cell, 10, 2019
3CI9
DownloadVisualize
BU of 3ci9 by Molmil
Crystal Structure of the human HSBP1
分子名称: Heat shock factor-binding protein 1
著者Liu, X, Xu, L, Liu, Y, Zhu, G, Zhang, X.C, Li, X, Rao, Z.
登録日2008-03-11
公開日2009-01-20
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the hexamer of human heat shock factor binding protein 1
Proteins, 75, 2009
5ZO1
DownloadVisualize
BU of 5zo1 by Molmil
Crystal structure of mouse nectin-like molecule 4 (mNecl-4) full ectodomain (Ig1-Ig3), 2.2A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 4, GLYCEROL
著者Liu, X, An, T, Li, D, Fan, Z, Xiang, P, Li, C, Ju, W, Li, J, Hu, G, Qin, B, Yin, B, Wojdyla, J.A, Wang, M, Yuan, J, Qiang, B, Shu, P, Cui, S, Peng, X.
登録日2018-04-12
公開日2019-01-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6OBA
DownloadVisualize
BU of 6oba by Molmil
The beta2 adrenergic receptor bound to a negative allosteric modulator
分子名称: (2S)-1-[(1-methylethyl)amino]-3-(2-prop-2-en-1-ylphenoxy)propan-2-ol, 6-bromo-N~2~-phenylquinazoline-2,4-diamine, Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor, ...
著者Liu, X, Stobel, A, Kaindl, J, Dengler, D, ClarK, M, Mahoney, J, Korczynska, M, Matt, R.A, Hubner, H, Xu, X, Stanek, M, Hirata, K, Shoichet, B, Sunahara, R, Gmeiner, R, Kobilka, B.K.
登録日2019-03-20
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献An allosteric modulator binds to a conformational hub in the beta2adrenergic receptor.
Nat.Chem.Biol., 16, 2020
5MV1
DownloadVisualize
BU of 5mv1 by Molmil
Crystal structure of the E protein of the Japanese encephalitis virulent virus
分子名称: E protein
著者Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J.
登録日2017-01-14
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism.
Protein Cell, 10, 2019
3QOF
DownloadVisualize
BU of 3qof by Molmil
Crystal structure of the cytosolic domain of human atlastin-1 in complex with GDP, orthorhombic form
分子名称: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Liu, X.
登録日2011-02-09
公開日2011-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Structures of the atlastin GTPase provide insight into homotypic fusion of endoplasmic reticulum membranes.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QNU
DownloadVisualize
BU of 3qnu by Molmil
Crystal structure of the cytosolic domain of human atlastin-1 in complex with GDP, hexagonal form
分子名称: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Liu, X.
登録日2011-02-09
公開日2011-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of the atlastin GTPase provide insight into homotypic fusion of endoplasmic reticulum membranes.
Proc.Natl.Acad.Sci.USA, 108, 2011
7MYN
DownloadVisualize
BU of 7myn by Molmil
Cryo-EM Structure of p110alpha in complex with p85alpha
分子名称: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Liu, X, Yang, S, Hart, J.R, Xu, Y, Zou, X, Zhang, H, Zhou, Q, Xia, T, Zhang, Y, Yang, D, Wang, M.-W, Vogt, P.K.
登録日2021-05-21
公開日2021-11-10
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Cryo-EM structures of PI3K alpha reveal conformational changes during inhibition and activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MYO
DownloadVisualize
BU of 7myo by Molmil
Cryo-EM structure of p110alpha in complex with p85alpha inhibited by BYL-719
分子名称: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Liu, X, Yang, S, Hart, J.R, Xu, Y, Zou, X, Zhang, H, Zhou, Q, Xia, T, Zhang, Y, Yang, D, Wang, M.-W, Vogt, P.K.
登録日2021-05-21
公開日2021-11-10
最終更新日2021-11-24
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Cryo-EM structures of PI3K alpha reveal conformational changes during inhibition and activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
2XD8
DownloadVisualize
BU of 2xd8 by Molmil
Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7
分子名称: T7-LIKE CAPSID PROTEIN
著者Liu, X, Zhang, Q, Murata, K, Baker, M.L, Sullivan, M.B, Fu, C, Dougherty, M, Schmid, M.F, Osburne, M.S, Chisholm, S.W, Chiu, W.
登録日2010-04-30
公開日2010-06-16
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural Changes in a Marine Podovirus Associated with Release of its Genome Into Prochlorococcus
Nat.Struct.Mol.Biol., 17, 2010
2YXP
DownloadVisualize
BU of 2yxp by Molmil
The Effect of Deuteration on Protein Structure A High Resolution Comparison of Hydrogenous and Perdeuterated Haloalkane Dehalogenase
分子名称: Haloalkane dehalogenase
著者Liu, X, Hanson, L, Langan, P, Viola, R.E.
登録日2007-04-27
公開日2007-09-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献The effect of deuteration on protein structure: a high-resolution comparison of hydrogenous and perdeuterated haloalkane dehalogenase.
Acta Crystallogr.,Sect.D, 63, 2007
5HRC
DownloadVisualize
BU of 5hrc by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with L-aspartate
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ASPARTIC ACID, aspartate/glutamate racemase
著者Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
登録日2016-01-23
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.765 Å)
主引用文献Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
5HRA
DownloadVisualize
BU of 5hra by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with D-aspartate
分子名称: D-ASPARTIC ACID, aspartate/glutamate racemase
著者Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
登録日2016-01-23
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016

219515

件を2024-05-08に公開中

PDB statisticsPDBj update infoContact PDBjnumon