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PDB: 47 results

7SKY
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BU of 7sky by Molmil
Pertussis toxin S1 bound to NAD+
Descriptor: IODIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pertussis toxin subunit 1
Authors:Littler, D.R, Beddoe, T, Pulliainen, A, Rossjohn, J.
Deposit date:2021-10-21
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.37000132 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
7SKK
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BU of 7skk by Molmil
pertussis toxin in complex with ADPR and Nicotinamide
Descriptor: NICOTINAMIDE, Pertussis toxin subunit 1, SULFATE ION, ...
Authors:Littler, D.R, Beddoe, T, Pulliainen, A, Rossjohn, J.
Deposit date:2021-10-21
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65000772 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
3KJY
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BU of 3kjy by Molmil
Crystal structure of reduced HOMO SAPIENS CLIC3
Descriptor: Chloride intracellular channel protein 3, SULFATE ION
Authors:Littler, D.R, Curmi, P.M.G, Breit, S.N, Perrakis, A.
Deposit date:2009-11-04
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of human CLIC3 at 2 A resolution
Proteins, 78, 2010
7SKI
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BU of 7ski by Molmil
Pertussis toxin in complex with PJ34
Descriptor: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, Pertussis toxin subunit 1
Authors:Littler, D.R, Beddoe, T, Pulliainen, A, Rossjohn, J.
Deposit date:2021-10-20
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.09912443 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
7SNE
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BU of 7sne by Molmil
Pertussis toxin S1 subunit bound to BaAD
Descriptor: Pertussis toxin subunit 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [(2R,3S,4R,5S)-5-(3-carbamoylanilino)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name)
Authors:Littler, D.R, Beddoe, T.
Deposit date:2021-10-28
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.00011 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
7U6Z
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BU of 7u6z by Molmil
Pertussis toxin E129D NAD
Descriptor: IODIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pertussis toxin subunit 1
Authors:Littler, D.R, Beddoe, T, Pulliainen, A, Rossjohn, J.
Deposit date:2022-03-06
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.30002 Å)
Cite:Crystal structures of pertussis toxin with NAD + and analogs provide structural insights into the mechanism of its cytosolic ADP-ribosylation activity.
J.Biol.Chem., 298, 2022
8DQU
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BU of 8dqu by Molmil
Nanobody bound SARS-CoV-2 Nsp9
Descriptor: Nanobody, Non-structural protein 9
Authors:Littler, D.R, Gully, B.S, Rossjohn, J.
Deposit date:2022-07-20
Release date:2023-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45003176 Å)
Cite:Inside-out: Antibody-binding reveals potential folding hinge-points within the SARS-CoV-2 replication co-factor nsp9.
Plos One, 18, 2023
5T3N
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BU of 5t3n by Molmil
Sp-2Cl-cAMPS bound to PKAR CBD2
Descriptor: (2S,4aR,6R,7R,7aS)-6-(6-amino-2-chloro-9H-purin-9-yl)-7-hydroxy-2-sulfanyltetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-2-one, IODIDE ION, cAMP-dependent protein kinase regulatory subunit
Authors:Littler, D.R, Gilson, P.
Deposit date:2016-08-26
Release date:2016-10-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Disrupting the Allosteric Interaction between the Plasmodium falciparum cAMP-dependent Kinase and Its Regulatory Subunit.
J. Biol. Chem., 291, 2016
4B94
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BU of 4b94 by Molmil
Crystal structure of human Mps1 TPR domain
Descriptor: DI(HYDROXYETHYL)ETHER, DUAL SPECIFICITY PROTEIN KINASE TTK, GLYCEROL, ...
Authors:Littler, D, von Castelmur, E, De Marco, V, Perrakis, A.
Deposit date:2012-08-31
Release date:2013-04-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Tpr Domain-Containing N-Terminal Module of Mps1 is Required for its Kinetochore Localization by Aurora B.
J.Cell Biol., 201, 2013
1RK4
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BU of 1rk4 by Molmil
Crystal Structure of a Soluble Dimeric Form of Oxidised CLIC1
Descriptor: CHLORIDE INTRACELLULAR CHANNEL PROTEIN 1
Authors:Littler, D.R, Harrop, S.J, Fairlie, W.D, Brown, L.J, Pankhurst, G.J, Pankhurst, S, DeMaere, M.Z, Campbell, T.J, Bauskin, A.R, Tonini, R, Mazzanti, M, Breit, S.N, Curmi, P.M.
Deposit date:2003-11-20
Release date:2003-12-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:The Intracellular Chloride Ion Channel Protein CLIC1 Undergoes a Redox-controlled Structural Transition
J.Biol.Chem., 279, 2004
5KBF
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BU of 5kbf by Molmil
cAMP bound PfPKA-R (141-441)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CAMP-dependent protein kinase regulatory subunit, putative
Authors:Littler, D.R, Gilson, P.R, Crabb, B.S, Rossjohn, J.J.
Deposit date:2016-06-03
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Disrupting the Allosteric Interaction between the Plasmodium falciparum cAMP-dependent Kinase and Its Regulatory Subunit.
J. Biol. Chem., 291, 2016
5K8S
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BU of 5k8s by Molmil
cAMP bound PfPKA-R (297-441)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CAMP-dependent protein kinase regulatory subunit
Authors:Littler, D.R, Gilson, P.R, Crabb, B.S, Rossjohn, J.J.
Deposit date:2016-05-31
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Disrupting the Allosteric Interaction between the Plasmodium falciparum cAMP-dependent Kinase and Its Regulatory Subunit.
J. Biol. Chem., 291, 2016
4Z9C
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BU of 4z9c by Molmil
EcPltAB Oxidized
Descriptor: PHOSPHATE ION, Pertussis toxin-like subunit ArtA, Subtilase cytotoxin subunit B-like protein
Authors:Littler, D.R, Johnson, M.D, Summers, R.J, Schembri, M.A, Rossjohn, J, Beddoe, T.
Deposit date:2015-04-10
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure and function analyses of a pertussis-like toxin from pathogenic Escherichia coli reveal a distinct mechanism of inhibition of trimeric G proteins.
J. Biol. Chem., 2017
4Z9D
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BU of 4z9d by Molmil
EcPltA
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pertussis toxin-like subunit ArtA, SODIUM ION
Authors:Littler, D.R, Johnson, M.D, Summers, R.J, Schembri, M.A, Rossjohn, J, Beddoe, T.
Deposit date:2015-04-10
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function analyses of a pertussis-like toxin from pathogenic Escherichia coli reveal a distinct mechanism of inhibition of trimeric G proteins.
J. Biol. Chem., 2017
4L6T
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BU of 4l6t by Molmil
GM1 bound form of the ECX AB5 holotoxin
Descriptor: ECXA, ECXB, ZINC ION, ...
Authors:Littler, D.R, Ng, N.M, Rossjohn, J, Beddoe, T.
Deposit date:2013-06-12
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:EcxAB Is a Founding Member of a New Family of Metalloprotease AB5 Toxins with a Hybrid Cholera-like B Subunit.
Structure, 21, 2013
7KRI
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BU of 7kri by Molmil
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase
Descriptor: 1,3-dimethyl-1H-pyrrolo[3,4-d]pyrimidine-2,4(3H,6H)-dione, MALONATE ION, Non-structural protein 9, ...
Authors:Littler, D.R, Gully, B.S, Rossjohn, J.
Deposit date:2020-11-20
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Binding of a pyrimidine RNA base-mimic to SARS-CoV-2 nonstructural protein 9.
J.Biol.Chem., 297, 2021
3G73
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BU of 3g73 by Molmil
Structure of the FOXM1 DNA binding
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*TP*AP*TP*AP*AP*AP*CP*AP*GP*CP*CP*CP*G)-3'), DNA (5'-D(P*TP*TP*CP*GP*GP*GP*CP*TP*GP*TP*TP*TP*AP*TP*AP*AP*AP*CP*AP*AP*T)-3'), Forkhead box protein M1, ...
Authors:Littler, D.R, Perrakis, A, Hibbert, R.G, Medema, R.H.
Deposit date:2009-02-09
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of the FoxM1 DNA-recognition domain bound to a promoter sequence
Nucleic Acids Res., 2010
8SHI
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BU of 8shi by Molmil
Valpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRL
Descriptor: Beta-2-microglobulin, MHC class I antigen (Fragment), T cell receptor alpha, ...
Authors:Littler, D.R, Anand, S, Vivian, J.P, Rossjohn, J.
Deposit date:2023-04-14
Release date:2023-06-28
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.90001726 Å)
Cite:Complimentary electrostatics dominate T-cell receptor binding to a psoriasis-associated peptide antigen presented by human leukocyte antigen C∗06:02.
J.Biol.Chem., 299, 2023
7N3K
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BU of 7n3k by Molmil
Oridonin-bound SARS-CoV-2 Nsp9
Descriptor: (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one, Non-structural protein 9, SULFATE ION
Authors:Littler, D.R, Gully, B.S, Rossjohn, J.
Deposit date:2021-06-01
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:A natural product compound inhibits coronaviral replication in vitro by binding to the conserved Nsp9 SARS-CoV-2 protein.
J.Biol.Chem., 297, 2021
4L63
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BU of 4l63 by Molmil
Apo form of AB5 holotoxin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ECXA, ECXB, ...
Authors:Littler, D.R, Ng, N.M, Rossjohn, J, Beddoe, T.
Deposit date:2013-06-11
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:EcxAB Is a Founding Member of a New Family of Metalloprotease AB5 Toxins with a Hybrid Cholera-like B Subunit.
Structure, 21, 2013
2H6D
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BU of 2h6d by Molmil
Protein Kinase Domain of the Human 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK alpha-2 chain)
Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-2
Authors:Littler, D.R, Walker, J.R, Wybenga-Groot, L, Newman, E.M, Butler-Cole, C, Mackenzie, F, Finerty, P.J, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-05-31
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A conserved mechanism of autoinhibition for the AMPK kinase domain: ATP-binding site and catalytic loop refolding as a means of regulation.
Acta Crystallogr.,Sect.F, 66, 2010
8EMI
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BU of 8emi by Molmil
Crystal structure of a HLA-B*35:01-NP8 epitope from 2005 H1N1 influenza strain
Descriptor: ACETATE ION, Beta-2-microglobulin, MHC class I antigen, ...
Authors:Littler, D.R, Rossjohn, J.
Deposit date:2022-09-27
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.57301509 Å)
Cite:Molecular determinants of cross-strain influenza A virus recognition by T-cell receptors
To Be Published
8EMK
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BU of 8emk by Molmil
Crystal structure of HLA-B*35:01-NP3 epitope from 1957 H2N2 influenza strain
Descriptor: Beta-2-microglobulin, MHC class I antigen, Nucleoprotein NP3 epitope, ...
Authors:Littler, D.R, Rossjohn, J.
Deposit date:2022-09-27
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.66523 Å)
Cite:Molecular determinants of cross-strain influenza A virus recognition by T-cell receptors
To Be Published
8TUB
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BU of 8tub by Molmil
HLA B7:02 with HPNGYKSLSTL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
Authors:Littler, D.R, Rossjohn, J, Chaurasia, P, Petersen, J.
Deposit date:2023-08-16
Release date:2024-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CD8 + T-cell responses towards conserved influenza B virus epitopes across anatomical sites and age.
Nat Commun, 15, 2024
6WC1
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BU of 6wc1 by Molmil
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase
Descriptor: SARS-coV-2 Non-structural protein 9, SULFATE ION
Authors:Littler, D.R, Gully, B.S, Rossjohn, J.
Deposit date:2020-03-28
Release date:2020-08-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of a putative peptide-binding site at the dimer interface of the SARS-CoV-2 Nsp9 RNA-replicase.
To Be Published

 

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