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PDB: 454 件

7ETJ
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C5 portal vertex in the partially-enveloped virion capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2021-05-13
公開日2021-07-14
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ET2
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BU of 7et2 by Molmil
Human Cytomegalovirus, C12 portal
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2021-05-12
公開日2021-07-14
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ET3
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BU of 7et3 by Molmil
C5 portal vertex in the enveloped virion capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2021-05-12
公開日2021-07-14
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
6JXL
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Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
著者Li, Z, Wan, Q.
登録日2019-04-23
公開日2020-04-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose
To Be Published
3ZIU
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Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site
分子名称: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE
著者Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T.
登録日2013-01-10
公開日2013-02-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
1R5I
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BU of 1r5i by Molmil
Crystal structure of the MAM-MHC complex
分子名称: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
著者Zhao, Y, Li, Z, Drozd, S.J, Guo, Y, Mourad, W, Li, H.
登録日2003-10-10
公開日2004-03-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Mycoplasma arthritidis mitogen complexed with HLA-DR1 reveals a novel superantigen fold and a dimerized superantigen-MHC complex.
Structure, 12, 2004
6TYY
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Hedgehog autoprocessing mutant D46H
分子名称: Protein hedgehog
著者Li, H, Li, Z, Wang, C, Callahan, B.P.
登録日2019-08-09
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献General Base Swap Preserves Activity and Expands Substrate Tolerance in Hedgehog Autoprocessing.
J.Am.Chem.Soc., 141, 2019
1HW2
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FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
分子名称: 5'-D(*CP*GP*AP*TP*CP*TP*GP*GP*TP*CP*CP*GP*AP*CP*CP*AP*GP*AP*TP*GP*CP*T)-3', 5'-D(*G*CP*AP*TP*CP*TP*GP*GP*TP*CP*GP*GP*AP*CP*CP*AP*GP*AP*TP*CP*GP*A)-3', FATTY ACID METABOLISM REGULATOR PROTEIN, ...
著者Xu, Y, Heath, R.J, Li, Z, Rock, C.O, White, S.W.
登録日2001-01-09
公開日2001-01-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli.
J.Biol.Chem., 276, 2001
1HW1
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THE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ESCHERICHIA COLI
分子名称: FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION, ZINC ION
著者Xu, Y, Heath, R.J, Li, Z, Rock, C.O, White, S.W.
登録日2001-01-09
公開日2001-01-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli.
J.Biol.Chem., 276, 2001
3C5W
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Complex between PP2A-specific methylesterase PME-1 and PP2A core enzyme
分子名称: PP2A A subunit, PP2A C subunit, PP2A-specific methylesterase PME-1
著者Xing, Y, Li, Z, Chen, Y, Stock, J, Jeffrey, P.D, Shi, Y.
登録日2008-02-01
公開日2008-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural mechanism of demethylation and inactivation of protein phosphatase 2A.
Cell(Cambridge,Mass.), 133, 2008
5JFI
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Crystal structure of a TDIF-TDR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CLE41, Leucine-rich repeat receptor-like protein kinase TDR
著者Xu, G, Li, Z.
登録日2016-04-19
公開日2017-03-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Crystal structure of a TDIF-TDR complex
To Be Published
2PY2
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BU of 2py2 by Molmil
Structure of Herring Type II Antifreeze Protein
分子名称: Antifreeze protein type II, CALCIUM ION
著者Liu, Y, Li, Z, Lin, Q, Seetharaman, J, Sivaraman, J, Hew, C.-L.
登録日2007-05-15
公開日2007-06-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Evolutionary Origin of Ca-Dependent Herring Type II Antifreeze Protein.
PLoS ONE, 2, 2007
3K51
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BU of 3k51 by Molmil
Crystal Structure of DcR3-TL1A complex
分子名称: Decoy receptor 3, Tumor necrosis factor ligand superfamily member 15, secreted form
著者Zhan, C, Patskovsky, Y, Yan, Q, Li, Z, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
登録日2009-10-06
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Decoy Strategies: The Structure of TL1A:DcR3 Complex.
Structure, 19, 2011
3J6J
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3.6 Angstrom resolution MAVS filament generated from helical reconstruction
分子名称: Mitochondrial antiviral-signaling protein
著者Wu, B, Peisley, A, Li, Z, Egelman, E, Walz, T, Penczek, P, Hur, S.
登録日2014-03-13
公開日2014-07-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
6LOX
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Crystal Structure of human glutaminase with macrocyclic inhibitor
分子名称: (E)-15,22-Dioxa-4,11-diaza-5(2,5)-thiadiazola-10(3,6)-pyridazina-1,14(1,3)-dibenzenacyclodocosaphan-18-ene-3,12-dione, Glutaminase kidney isoform, mitochondrial
著者Bian, J, Li, Z, Xu, X, Wang, J, Li, L.
登録日2020-01-07
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure-Enabled Discovery of Novel Macrocyclic Inhibitors Targeting Glutaminase 1 Allosteric Binding Site.
J.Med.Chem., 64, 2021
6U7E
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BU of 6u7e by Molmil
HCoV-229E RBD Class III in complex with human APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tomlinson, A.C.A, Li, Z, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
6U7G
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BU of 6u7g by Molmil
HCoV-229E RBD Class V in complex with human APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tomlinson, A, Li, Z, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
6U7F
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BU of 6u7f by Molmil
HCoV-229E RBD Class IV in complex with human APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tomlinson, A.C.A, Li, Z, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
6M4Q
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BU of 6m4q by Molmil
Cytochrome P450 monooxygenase StvP2 substrate-free structure
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Sun, G, Hu, C, Mei, Q, Luo, M, Chen, X, Li, Z, Liu, Y, Deng, Z, Zhang, Z, Sun, Y.
登録日2020-03-08
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Uncovering the cytochrome P450-catalyzed methylenedioxy bridge formation in streptovaricins biosynthesis.
Nat Commun, 11, 2020
6M4P
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BU of 6m4p by Molmil
Cytochrome P450 monooxygenase StvP2 substrate-bound structure
分子名称: 6-methoxy-streptovaricin C, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Sun, G, Hu, C, Mei, Q, Luo, M, Chen, X, Li, Z, Liu, Y, Deng, Z, Zhang, Z, Sun, Y.
登録日2020-03-08
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Uncovering the cytochrome P450-catalyzed methylenedioxy bridge formation in streptovaricins biosynthesis.
Nat Commun, 11, 2020
5C6H
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BU of 5c6h by Molmil
Mcl-1 complexed with Mule
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, Mule BH3 peptide from E3 ubiquitin-protein ligase HUWE1
著者Song, T, Wang, Z, Ji, F, Chai, G, Liu, Y, Li, X, Li, Z, Fan, Y, Zhang, Z.
登録日2015-06-23
公開日2016-08-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Mcl-1 complexed with Mule at 2.05 Angstroms resolution
To Be Published
4Y07
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BU of 4y07 by Molmil
Crystal structure of the HECT domain of human WWP2
分子名称: NEDD4-like E3 ubiquitin-protein ligase WWP2
著者Gong, W, Li, J, Li, Z, Xu, Y.
登録日2015-02-05
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献Structure of the HECT domain of human WWP2
Acta Crystallogr.,Sect.F, 71, 2015
2AXH
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Crystal structures of T cell receptor beta chains related to rheumatoid arthritis
分子名称: T cell receptor beta chain
著者Li, H, Van Vranken, S, Zhao, Y, Li, Z, Guo, Y, Eisele, L, Li, Y.
登録日2005-09-05
公開日2005-09-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
2AXJ
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Crystal structures of T cell receptor beta chains related to rheumatoid arthritis
分子名称: SF4 T cell receptor beta chain
著者Li, H, Van Vranken, S, Zhao, Y, Li, Z, Guo, Y, Eisele, L, Li, Y.
登録日2005-09-05
公開日2005-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
8CUS
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BU of 8cus by Molmil
Accurate computational design of genetically encoded 3D protein crystals
分子名称: I432-1(NaCl) Chain A, I432-1(NaCl) Chain B
著者Bera, A.K, Li, Z, Baker, D.
登録日2022-05-17
公開日2023-11-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.98 Å)
主引用文献Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023

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