Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 630 件

7KHR
DownloadVisualize
BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, R, Li, X.
登録日2020-10-21
公開日2021-03-17
最終更新日2021-09-29
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
3F5X
DownloadVisualize
BU of 3f5x by Molmil
CDK-2-Cyclin complex with indazole inhibitor 9 bound at its active site
分子名称: 4-{3-[7-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline, Cell division protein kinase 2, Cyclin-A2, ...
著者Kiefer, J.R, Day, J.E, Caspers, N.L, Mathis, K.J, Kretzmer, K.K, Weinberg, R.A, Reitz, B.A, Stegeman, R.A, Trujillo, J.I, Huang, W, Thorarensen, A, Xing, L, Wrightstone, A, Christine, L, Compton, R, Li, X.
登録日2008-11-04
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor.
Bioorg.Med.Chem.Lett., 19, 2009
5CN2
DownloadVisualize
BU of 5cn2 by Molmil
Crystal structure of yeast GGA1_GAE domain-C2221
分子名称: ADP-ribosylation factor-binding protein GGA1
著者Zhang, F, Song, Y, Li, X, Teng, M.K.
登録日2015-07-17
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5CN1
DownloadVisualize
BU of 5cn1 by Molmil
Crystal structure of yeast GGA1_GAE domain-P21
分子名称: ADP-ribosylation factor-binding protein GGA1
著者Zhang, F, Song, Y, Li, X, Teng, M.K.
登録日2015-07-17
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5CMY
DownloadVisualize
BU of 5cmy by Molmil
Crystal structure of yeast Ent5 N-terminal domain-native
分子名称: Epsin-5, GLYCEROL
著者Zhang, F, Song, Y, Li, X, Teng, M.K.
登録日2015-07-17
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
7LIB
DownloadVisualize
BU of 7lib by Molmil
X-ray crystal structure of a cyclic peptide containing beta-2-microglobulin (63-69) and a gamma-methylornithine turn unit
分子名称: Cyclic peptide ORD-TYR-LEU-LEU-PHI-TYR-THR-GLU-GMO-LYS-VAL-THR-MVA-THR-VAL-LYS
著者Wierzbicki, M, Nowick, J.S, Li, X.
登録日2021-01-26
公開日2021-08-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献An Improved Turn Structure for Inducing beta-Hairpin Formation in Peptides.
Angew.Chem.Int.Ed.Engl., 60, 2021
5D1I
DownloadVisualize
BU of 5d1i by Molmil
Structure of Cyclic nucleotide-binding-like protein from Brucella abortus bv. 1 str. 9-941
分子名称: Cyclic nucleotide-binding protein
著者He, Z, Dong, J, Li, X, Gao, Y.
登録日2015-08-04
公開日2015-09-09
最終更新日2016-01-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of cyclic nucleotide-binding-like protein from Brucella abortus
Biochem.Biophys.Res.Commun., 468, 2015
7LUG
DownloadVisualize
BU of 7lug by Molmil
Crystal structure of the pnRFP B30Y mutant
分子名称: PHOSPHATE ION, Red Fluorescent pnRFP B30Y mutant
著者Huang, M, Ng, H.L, Pang, Y, Zhang, S, Fan, Y, Yeh, H, Xiong, Y, Li, X, Ai, H.
登録日2021-02-22
公開日2022-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Development, Characterization, and Structural Analysis of a Genetically Encoded Red Fluorescent Peroxynitrite Biosensor
To Be Published
7LQO
DownloadVisualize
BU of 7lqo by Molmil
Crystal structure of a genetically encoded red fluorescent peroxynitrite biosensor, pnRFP
分子名称: PHOSPHATE ION, red fluorescent peroxynitrite biosensor pnRFP
著者Huang, M, Ng, H.L, Pang, Y, Zhang, S, Fan, Y, Yeh, H, Xiong, Y, Li, X, Ai, H.
登録日2021-02-14
公開日2022-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Development, Characterization, and Structural Analysis of a Genetically Encoded Red Fluorescent Peroxynitrite Biosensor
To Be Published
5ZZ3
DownloadVisualize
BU of 5zz3 by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A3
分子名称: Butyrophilin, subfamily 3, member A3 isoform b variant
著者Yang, Y.Y, Li, X, Liu, W.D, Chen, C.C, Guo, R.T, Zhang, Y.H.
登録日2018-05-30
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated V gamma 9V delta 2 T Cell Activation.
Immunity, 50, 2019
5EBG
DownloadVisualize
BU of 5ebg by Molmil
Crystal structure of bovine CD8aa homodimer
分子名称: T-cell surface glycoprotein CD8 alpha chain
著者Liu, Y, Li, X, Zhang, N, Qi, J, Xia, C.
登録日2015-10-19
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
4JGZ
DownloadVisualize
BU of 4jgz by Molmil
Crystal structure of human coxsackievirus A16 uncoating intermediate (space group I222)
分子名称: Polyprotein, capsid protein VP1, capsid protein VP2, ...
著者Ren, J, Wang, X, Hu, Z, Gao, Q, Sun, Y, Li, X, Porta, C, Walter, T.S, Gilbert, R.J, Zhao, Y, Axford, D, Williams, M, McAuley, K, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
登録日2013-03-04
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Picornavirus uncoating intermediate captured in atomic detail.
Nat Commun, 4, 2013
3VBC
DownloadVisualize
BU of 3vbc by Molmil
Crystal Structure of iL-17 receptor B SEFIR domain
分子名称: Interleukin-17 receptor B
著者Zhang, B, Liu, C, Li, X, Deng, J.
登録日2012-01-02
公開日2013-02-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of IL-17 Receptor B SEFIR Domain.
J.Immunol., 190, 2013
7UNE
DownloadVisualize
BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
分子名称: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
著者Wang, R, Li, X.
登録日2022-04-10
公開日2022-06-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7UNF
DownloadVisualize
BU of 7unf by Molmil
CryoEM structure of a mEAK7 bound human V-ATPase complex
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Wang, R, Li, X.
登録日2022-04-10
公開日2022-06-15
最終更新日2022-06-29
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7MGL
DownloadVisualize
BU of 7mgl by Molmil
Structure of human TRPML1 with ML-SI3
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Mucolipin-1, N-{(1S,2S)-2-[4-(2-methoxyphenyl)piperazin-1-yl]cyclohexyl}benzenesulfonamide
著者Schmiege, P, Li, X.
登録日2021-04-12
公開日2021-06-16
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Atomic insights into ML-SI3 mediated human TRPML1 inhibition.
Structure, 29, 2021
3HVN
DownloadVisualize
BU of 3hvn by Molmil
Crystal structure of cytotoxin protein suilysin from Streptococcus suis
分子名称: 1,1,1,3,3,3-hexafluoropropan-2-ol, HEPTANE-1,2,3-TRIOL, Hemolysin
著者Xu, L, Huang, B, Du, H, Zhang, C.X, Xu, J, Li, X, Rao, Z.
登録日2009-06-16
公開日2010-03-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.852 Å)
主引用文献Crystal structure of cytotoxin protein suilysin from Streptococcus suis.
Protein Cell, 1, 2010
7TUZ
DownloadVisualize
BU of 7tuz by Molmil
Cryo-EM structure of 7alpha,25-dihydroxycholesterol-bound EBI2/GPR183 in complex with Gi protein
分子名称: (2S,4aS,4bS,7R,8S,8aS,9R,10aR)-7-[(2R,3R)-7-hydroxy-3,7-dimethyloctan-2-yl]-4a,7,8-trimethyltetradecahydrophenanthrene-2,9-diol, G-protein coupled receptor 183, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Chen, H, Hung, W, Li, X.
登録日2022-02-03
公開日2022-04-13
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structures of oxysterol sensor EBI2/GPR183, a key regulator of the immune response.
Structure, 30, 2022
7TUY
DownloadVisualize
BU of 7tuy by Molmil
Cryo-EM structure of GSK682753A-bound EBI2/GPR183
分子名称: 8-[(2E)-3-(4-chlorophenyl)prop-2-enoyl]-3-[(3,4-dichlorophenyl)methyl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one, G-protein coupled receptor 183,Soluble cytochrome b562 fusion, anti-BRIL Fab Heavy chain, ...
著者Chen, H, Huang, W, Li, X.
登録日2022-02-03
公開日2022-04-13
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structures of oxysterol sensor EBI2/GPR183, a key regulator of the immune response.
Structure, 30, 2022
5EG3
DownloadVisualize
BU of 5eg3 by Molmil
Crystal Structure of the Activated FGF Receptor 2 (FGFR2) Kinase Domain in complex with the cSH2 domain of Phospholipase C gamma (PLCgamma)
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, Fibroblast growth factor receptor 2, MAGNESIUM ION, ...
著者Huang, Z, Li, X, Mohammadi, M.
登録日2015-10-26
公開日2016-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.606 Å)
主引用文献Two FGF Receptor Kinase Molecules Act in Concert to Recruit and Transphosphorylate Phospholipase C gamma.
Mol.Cell, 61, 2016
4JGY
DownloadVisualize
BU of 4jgy by Molmil
Crystal structure of human coxsackievirus A16 uncoating intermediate (space group P4232)
分子名称: Polyprotein, capsid protein VP1, capsid protein VP2, ...
著者Ren, J, Wang, X, Hu, Z, Gao, Q, Sun, Y, Li, X, Porta, C, Walter, T.S, Gilbert, R.J, Zhao, Y, Axford, D, Williams, M, Mcauley, K, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
登録日2013-03-04
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Picornavirus uncoating intermediate captured in atomic detail.
Nat Commun, 4, 2013
5D68
DownloadVisualize
BU of 5d68 by Molmil
Crystal structure of KRIT1 ARD-FERM
分子名称: Krev interaction trapped protein 1
著者Zhang, R, Li, X, Boggon, T.J.
登録日2015-08-11
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.908 Å)
主引用文献Structural analysis of the KRIT1 ankyrin repeat and FERM domains reveals a conformationally stable ARD-FERM interface.
J.Struct.Biol., 192, 2015
3EZV
DownloadVisualize
BU of 3ezv by Molmil
CDK-2 with indazole inhibitor 9 bound at its active site
分子名称: 4-{3-[7-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline, Cell division protein kinase 2
著者Kiefer, J.R, Day, J.E, Caspers, N.L, Mathis, K.J, Kretzmer, K.K, Weinberg, R.A, Reitz, B.A, Stegeman, R.A, Trujillo, J.I, Huang, W, Thorarensen, A, Xing, L, Wrightstone, A, Christine, L, Compton, R, Li, X.
登録日2008-10-23
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor
Bioorg.Med.Chem.Lett., 19, 2009
7EXT
DownloadVisualize
BU of 7ext by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
分子名称: Allophycocyanin alpha subunit, Allophycocyanin beta subunit, Allophycocyanin subunit alpha-B, ...
著者Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
登録日2021-05-28
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
7EYD
DownloadVisualize
BU of 7eyd by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
分子名称: Allophycocyanin subunit alpha 1, Allophycocyanin subunit alpha-B, Allophycocyanin subunit beta, ...
著者Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
登録日2021-05-30
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon