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PDB: 42289 results

5WBQ
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Structure of human Ketohexokinase complexed with hits from fragment screening
Descriptor: 2-ethyl-7-[(3S)-3-hydroxy-3-methylpyrrolidin-1-yl]-5-(trifluoromethyl)-1H-pyrrolo[3,2-b]pyridine-6-carbonitrile, CHLORIDE ION, Ketohexokinase, ...
Authors:Pandit, J.
Deposit date:2017-06-29
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of Fragment-Derived Small Molecules for in Vivo Inhibition of Ketohexokinase (KHK).
J. Med. Chem., 60, 2017
2O9Q
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BU of 2o9q by Molmil
The crystal structure of Bovine Trypsin complexed with a small inhibition peptide ORB2K
Descriptor: CALCIUM ION, Cationic trypsin, ORB2K, ...
Authors:Li, J, Zhang, C, Xu, X, Wang, J, Gong, W, Lai, R.
Deposit date:2006-12-14
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:From protease inhibitor to antibiotics: single point mutation makes tremendous functional shift
To be Published
8TUP
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BU of 8tup by Molmil
Cryo-EM structure of the human MRS2 magnesium channel under Mg2+-free condition
Descriptor: MAGNESIUM ION, Magnesium transporter MRS2 homolog, mitochondrial
Authors:Lai, L.T.F, Balaraman, J, Zhou, F, Matthies, D.
Deposit date:2023-08-16
Release date:2023-09-13
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of human magnesium channel MRS2 reveal gating and regulatory mechanisms.
Nat Commun, 14, 2023
4OEX
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BU of 4oex by Molmil
Crystal structure of the PDE5A1 catalytic domain in complex with novel inhibitors
Descriptor: 6-ethyl-2-{5-[(4-methylpiperazin-1-yl)sulfonyl]-2-propoxyphenyl}pyrimidin-4(3H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Chen, T.T, Ren, J, Xu, Y.C.
Deposit date:2014-01-14
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Thermodynamic and structural characterization of halogen bonding in protein-ligand interactions: a case study of PDE5 and its inhibitors.
J.Med.Chem., 57, 2014
6W8R
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BU of 6w8r by Molmil
Crystal structure of metacaspase 4 C139A from Arabidopsis
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6WBM
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BU of 6wbm by Molmil
Cryo-EM structure of human Pannexin 1 channel N255A mutant
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL, DIACYL GLYCEROL, ...
Authors:Lu, W, Du, J, Ruan, Z.
Deposit date:2020-03-26
Release date:2020-06-03
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of human pannexin 1 reveal ion pathways and mechanism of gating.
Nature, 584, 2020
8TUL
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BU of 8tul by Molmil
Cryo-EM structure of the human MRS2 magnesium channel under Mg2+ condition
Descriptor: MAGNESIUM ION, Magnesium transporter MRS2 homolog, mitochondrial
Authors:Lai, L.T.F, Balaraman, J, Zhou, F, Matthies, D.
Deposit date:2023-08-16
Release date:2023-09-13
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of human magnesium channel MRS2 reveal gating and regulatory mechanisms.
Nat Commun, 14, 2023
7R0X
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BU of 7r0x by Molmil
Structure of the branching thioesterase from oocydin biosynthesis
Descriptor: Polyketide synthase
Authors:Fraley, A.E, Piel, J.
Deposit date:2022-02-02
Release date:2022-08-10
Last modified:2022-09-28
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structure of a Promiscuous Thioesterase Domain Responsible for Branching Acylation in Polyketide Biosynthesis.
Angew.Chem.Int.Ed.Engl., 61, 2022
8BSA
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BU of 8bsa by Molmil
Vc1313-LBD bound to D-arginine
Descriptor: D-ARGININE, Methyl-accepting chemotaxis protein
Authors:ter Beek, J, Berntsson, R.P.-A.
Deposit date:2022-11-24
Release date:2023-06-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:D-amino acids signal a stress-dependent run-away response in Vibrio cholerae.
Nat Microbiol, 8, 2023
1CQH
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BU of 1cqh by Molmil
HIGH RESOLUTION SOLUTION NMR STRUCTURE OF MIXED DISULFIDE INTERMEDIATE BETWEEN HUMAN THIOREDOXIN (C35A, C62A, C69A, C73A) MUTANT AND A 13 RESIDUE PEPTIDE COMPRISING ITS TARGET SITE IN HUMAN REF-1 (RESIDUES 59-71 OF THE P50 SUBUNIT OF NFKB), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: REF-1 PEPTIDE, THIOREDOXIN
Authors:Clore, G.M, Qin, J, Gronenborn, A.M.
Deposit date:1996-04-02
Release date:1996-08-01
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:The solution structure of human thioredoxin complexed with its target from Ref-1 reveals peptide chain reversal.
Structure, 4, 1996
6WA3
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BU of 6wa3 by Molmil
Solution NMR structure of the myristoylated feline immunodeficiency virus matrix protein
Descriptor: MYRISTIC ACID, Matrix protein
Authors:Brown, J.B, Summers, H.R, Brown, L.A, Marchant, J, Canova, P.N, O'Hern, C.T, Abbott, S, Nyaunu, C, Maxwell, S, Johnson, T, Moser, M, Ablan, S.D, Carter, H, Freed, E.O, Summers, M.F.
Deposit date:2020-03-24
Release date:2020-07-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Mechanistic Studies of the Rare Myristoylation Signal of the Feline Immunodeficiency Virus.
J.Mol.Biol., 432, 2020
8BSB
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BU of 8bsb by Molmil
Vc1313-LBD bound to D-lysine
Descriptor: D-LYSINE, Methyl-accepting chemotaxis protein
Authors:ter Beek, J, Berntsson, R.P.-A.
Deposit date:2022-11-24
Release date:2023-06-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:D-amino acids signal a stress-dependent run-away response in Vibrio cholerae.
Nat Microbiol, 8, 2023
8U27
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BU of 8u27 by Molmil
Bcl-2-xL complexed with compound 35
Descriptor: Apoptosis regulator Bcl-2, Bcl-2-like protein 1 chimera, propan-2-yl {4-[(5S)-1-(4-bromobenzoyl)-5-phenyl-4,5-dihydro-1H-pyrazol-3-yl]phenyl}carbamate
Authors:Rizo, J, Pan, Y.-Z.
Deposit date:2023-09-05
Release date:2023-09-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights for selective disruption of Beclin 1 binding to Bcl-2.
Commun Biol, 6, 2023
6VRY
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BU of 6vry by Molmil
Structure of NCI09 fab in complex with SIV V2 peptide
Descriptor: NCI09 heavy chain, NCI09 light chain, SIV V2 peptide, ...
Authors:Gorman, J, Ahmadi, M, Kwong, P.D.
Deposit date:2020-02-10
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:HIV vaccine candidate with V1 deletion reveals virus vulnerability to V2 antibodies
Iscience, 2020
6VW9
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BU of 6vw9 by Molmil
C-terminal regulatory domain of the chloride transporter KCC-1 from C. elegans, proteolyzed during crystallization
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, GLYCEROL, K+/Cl-Cotransporter
Authors:Zimanyi, C.M, Cheung, J.
Deposit date:2020-02-19
Release date:2020-07-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Regulatory Cytosolic Domain of a Eukaryotic Potassium-Chloride Cotransporter.
Structure, 28, 2020
2H3I
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BU of 2h3i by Molmil
Solution structure of the HIV-1 myristoylated Matrix protein
Descriptor: Gag polyprotein, MYRISTIC ACID
Authors:Saad, J.S, Miller, J, Tai, J, Kim, A, Ghanam, R.H, Summers, M.F.
Deposit date:2006-05-22
Release date:2006-07-25
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3PKN
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BU of 3pkn by Molmil
Crystal structure of MLLE domain of poly(A) binding protein in complex with PAM2 motif of La-related protein 4 (LARP4)
Descriptor: IODIDE ION, La-related protein 4, Polyadenylate-binding protein 1, ...
Authors:Xie, J, Kozlov, G, Gehring, K.
Deposit date:2010-11-11
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:La-Related Protein 4 Binds Poly(A), Interacts with the Poly(A)-Binding Protein MLLE Domain via a Variant PAM2w Motif, and Can Promote mRNA Stability.
Mol.Cell.Biol., 31, 2011
6QXP
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BU of 6qxp by Molmil
Protein peptide complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat extensin-like protein 2, ...
Authors:Moussu, S, Caroline, C, Santos-Fernandez, G, Wehrle, S, Grossniklaus, U, Santiago, J.
Deposit date:2019-03-07
Release date:2020-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth.
Proc.Natl.Acad.Sci.USA, 117, 2020
8TP6
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BU of 8tp6 by Molmil
H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 4-1-1E02
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 4-1-1E02 Fab, ...
Authors:Yang, Y.R, Han, J, Perrett, H.R, Ward, A.B.
Deposit date:2023-08-04
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Immune memory shapes human polyclonal antibody responses to H2N2 vaccination.
Biorxiv, 2023
5WMN
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BU of 5wmn by Molmil
Crystal Structure of HLA-B7 in complex with SPI, an influenza peptide
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Gras, S, Rossjohn, J.
Deposit date:2017-07-30
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Inability To Detect Cross-Reactive Memory T Cells Challenges the Frequency of Heterologous Immunity among Common Viruses.
J. Immunol., 200, 2018
2GIV
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BU of 2giv by Molmil
Human MYST histone acetyltransferase 1
Descriptor: ACETYL COENZYME *A, CHLORIDE ION, Probable histone acetyltransferase MYST1, ...
Authors:Min, J, Wu, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-03-29
Release date:2006-04-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The Crystal Structure of Human MYST histone acetyltransferase 1 in complex with acetylcoenzyme A
To be Published
7Y8F
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BU of 7y8f by Molmil
Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with an Inhibitor 30o and GRIP Peptide
Descriptor: DI(HYDROXYETHYL)ETHER, Estrogen receptor, Grip peptide, ...
Authors:Min, J, Hu, H.B, Yang, Y, Dong, C.E, Zhou, H.B, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-guided identification of novel dual-targeting estrogen receptor alpha degraders with aromatase inhibitory activity for the treatment of endocrine-resistant breast cancer.
Eur.J.Med.Chem., 253, 2023
7Y8G
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BU of 7y8g by Molmil
Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with an Inhibitor 30a and GRIP Peptide
Descriptor: DI(HYDROXYETHYL)ETHER, Estrogen receptor, Grip peptide, ...
Authors:Min, J, Hu, H.B, Yang, Y, Dong, C.E, Zhou, H.B, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure-guided identification of novel dual-targeting estrogen receptor alpha degraders with aromatase inhibitory activity for the treatment of endocrine-resistant breast cancer.
Eur.J.Med.Chem., 253, 2023
6VYG
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BU of 6vyg by Molmil
Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Descriptor: Phosphotransferase
Authors:Srivastava, S.S, Darling, J.E, Suryadi, J, Morris, J.C, Drew, M.E, Subramaniam, S.
Deposit date:2020-02-26
Release date:2020-05-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Plasmodium vivax and human hexokinases share similar active sites but display distinct quaternary architectures
Iucrj, 7, 2020
8BOX
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BU of 8box by Molmil
LSD1-CoREST in complex with AW4 and SNAG peptide
Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ...
Authors:Caroli, J, Mattevi, A.
Deposit date:2022-11-15
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published

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數據於2024-07-17公開中

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