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PDB: 42254 results

5K95
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Crystal Structure of GTP Cyclohydrolase-IB with 8-oxo-GTP
Descriptor: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase FolE2, ZINC ION
Authors:Alvarez, J, Stec, B, Swairjo, M.A.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Mechanism and catalytic strategy of the prokaryotic-specific GTP cyclohydrolase-IB.
Biochem.J., 474, 2017
2FY9
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BU of 2fy9 by Molmil
Solution Structure of the N-Terminal DNA Recognition Domain of the Bacillus Subtilis Transcription-State Regulator ABH
Descriptor: Putative transition state regulator abh
Authors:Cavanagh, J, Bobay, B.G.
Deposit date:2006-02-07
Release date:2006-05-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR Structure of AbhN and Comparison with AbrBN: First insights into the DNA-binding promiscuity and specificity of AbrB-like transition-state regulator proteins
J.Biol.Chem., 281, 2006
2G15
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Structural Characterization of autoinhibited c-Met kinase
Descriptor: activated met oncogene
Authors:Wang, W, Marimuthu, A, Tsai, J, Kumar, A, Krupka, H.I, Zhang, C, Powell, B, Suzuki, Y, Nguyen, H, Tabrizizad, M, Luu, C, West, B.L.
Deposit date:2006-02-13
Release date:2006-03-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of autoinhibited c-Met kinase produced by coexpression in bacteria with phosphatase.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5K9G
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BU of 5k9g by Molmil
Crystal Structure of GTP Cyclohydrolase-IB with Tris
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, ...
Authors:Alvarez, J, Stec, B, Swairjo, M.A.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism and catalytic strategy of the prokaryotic-specific GTP cyclohydrolase-IB.
Biochem.J., 474, 2017
5KDD
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BU of 5kdd by Molmil
Apo-structure of humanised RadA-mutant humRadA22
Descriptor: DNA repair and recombination protein RadA, SULFATE ION
Authors:Fischer, G, Marsh, M, Moschetti, T, Sharpe, T, Scott, D, Morgan, M, Ng, H, Skidmore, J, Venkitaraman, A, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2016-06-08
Release date:2016-10-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.
J.Mol.Biol., 428, 2016
2G35
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NMR structure of talin-PTB in complex with PIPKI
Descriptor: Talin-1, peptide
Authors:Kong, X, Wang, X, Misra, S, Qin, J.
Deposit date:2006-02-17
Release date:2006-05-02
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural Basis for the Phosphorylation-regulated Focal Adhesion Targeting of Type Igamma Phosphatidylinositol Phosphate Kinase (PIPKIgamma) by Talin.
J.Mol.Biol., 359, 2006
5KEN
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BU of 5ken by Molmil
EBOV GP in complex with variable Fab domains of IgGs c4G7 and c13C6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ebola surface glycoprotein, ...
Authors:Pallesen, J, Murin, C.D, de Val, N, Cottrell, C.A, Hastie, K.M, Turner, H.L, Fusco, M.L, Flyak, A.I, Zeitlin, L, Crowe Jr, J.E, Andersen, K.G, Saphire, E.O, Ward, A.B.
Deposit date:2016-06-09
Release date:2016-09-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
Nat Microbiol, 1, 2016
2G1E
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BU of 2g1e by Molmil
Solution Structure of TA0895
Descriptor: hypothetical protein Ta0895
Authors:Yeo, I.Y, Hong, E, Jung, J, Lee, W, Yee, A, Arrowsmith, C.H.
Deposit date:2006-02-14
Release date:2006-12-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of TA0895, a MoaD homologue from Thermoplasma acidophilum
Proteins, 65, 2006
2G7R
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BU of 2g7r by Molmil
X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
Descriptor: Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Walker, J.R, Wybenga-Groot, L, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-02-28
Release date:2006-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
To be Published
2G57
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BU of 2g57 by Molmil
Structure of the Phosphorylation Motif of the oncogenic Protein beta-Catenin Recognized By a Selective Monoclonal Antibody
Descriptor: Beta-catenin
Authors:Megy, S, Bertho, G, Gharbi-Benarous, J, Baleux, F, Benarous, R, Girault, J.P.
Deposit date:2006-02-22
Release date:2006-03-28
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:STD and TRNOESY NMR studies for the epitope mapping of the phosphorylation motif of the oncogenic protein beta-catenin recognized by a selective monoclonal antibody
Febs Lett., 580, 2006
5KEQ
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BU of 5keq by Molmil
High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Descriptor: Major capsid protein L1
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
Deposit date:2016-06-10
Release date:2017-01-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
2GF7
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BU of 2gf7 by Molmil
Double tudor domain structure
Descriptor: Jumonji domain-containing protein 2A, SULFATE ION
Authors:Huang, Y, Fang, J, Bedford, M.T, Zhang, Y, Xu, R.M.
Deposit date:2006-03-21
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A
Science, 312, 2006
5KGL
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BU of 5kgl by Molmil
2.45A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (orthorhombic form)
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Lovell, S, Mehzabeen, N, Battaile, K.P, Yu, H, Dranchak, P, MacArthur, R, Li, Z, Carlow, T, Suga, H, Inglese, J.
Deposit date:2016-06-13
Release date:2017-04-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases.
Nat Commun, 8, 2017
2GCY
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BU of 2gcy by Molmil
humanized antibody C25 Fab fragment
Descriptor: SULFATE ION, huC25 fab fragment heavy chain, huC25 fab fragment light chain
Authors:LaPorte, S.L, Finer-Moore, J, Marks, J.D, Forsyth, C.M.
Deposit date:2006-03-14
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Humanization and structure of antibody clone C25
To be Published
2FYW
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BU of 2fyw by Molmil
Crystal Structure of a Conserved Protein of Unknown Function from Streptococcus pneumoniae
Descriptor: conserved hypothetical protein
Authors:Nocek, B, Hatzos, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-02-08
Release date:2006-03-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a conserved hypothetical protein from Streptococcus pneumoniae TIGR4
To be Published
5K6P
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BU of 5k6p by Molmil
The NMR structure of the m domain tri-helix bundle and C2 of human cardiac Myosin Binding Protein C
Descriptor: Myosin-binding protein C, cardiac-type
Authors:Michie, K.A, Kwan, A.H, Tung, C.S, Guss, J.M, Trewhella, J.
Deposit date:2016-05-25
Release date:2016-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Highly Conserved Yet Flexible Linker Is Part of a Polymorphic Protein-Binding Domain in Myosin-Binding Protein C.
Structure, 24, 2016
2GF2
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BU of 2gf2 by Molmil
Crystal structure of human hydroxyisobutyrate dehydrogenase
Descriptor: 3-hydroxyisobutyrate dehydrogenase
Authors:Papagrigoriou, E, Salah, E, Turnbull, A.P, Smee, C, Burgess, N, Gileadi, O, von Delft, F, Gorrec, F, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-03-21
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of human hydroxyisobutyrate dehydrogenase
To be Published
5JPW
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BU of 5jpw by Molmil
Molecular basis for protein recognition specificity of the DYNLT1/Tctex1 canonical binding groove. Characterization of the interaction with activin receptor IIB
Descriptor: Dynein light chain Tctex-type 1,Cytoplasmic dynein 1 intermediate chain 2
Authors:Rodriguez-Crespo, I, Merino-Gracia, J, Bruix, M, Zamora-Carreras, H.
Deposit date:2016-05-04
Release date:2016-08-17
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Molecular Basis for the Protein Recognition Specificity of the Dynein Light Chain DYNLT1/Tctex1: CHARACTERIZATION OF THE INTERACTION WITH ACTIVIN RECEPTOR IIB.
J.Biol.Chem., 291, 2016
2G2C
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BU of 2g2c by Molmil
Putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.
Descriptor: Putative molybdenum cofactor biosynthesis protein, SODIUM ION
Authors:Osipiuk, J, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-02-15
Release date:2006-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray crystal structure of putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.
To be Published
2FYG
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BU of 2fyg by Molmil
Crystal structure of NSP10 from Sars coronavirus
Descriptor: GLYCEROL, Replicase polyprotein 1ab, ZINC ION
Authors:Joseph, J.S, Saikatendu, K.S, Subramanian, V, Neuman, B.W, Brooun, A, Griffith, M, Moy, K, Yadav, M.K, Velasquez, J, Buchmeier, M.J, Stevens, R.C, Kuhn, P.
Deposit date:2006-02-07
Release date:2006-08-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of nonstructural protein 10 from the severe acute respiratory syndrome coronavirus reveals a novel fold with two zinc-binding motifs.
J.Virol., 80, 2006
5KK8
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BU of 5kk8 by Molmil
Crystal structure of Nucleoside Diphosphate Kinase from Schistosoma mansoni in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
Authors:Torini, J.R.S, Romanello, L, Bird, L.E, Nettleship, J.E, Owens, R.J, Aller, P, DeMarco, R, Brandao-Neto, J, Pereira, H.M.
Deposit date:2016-06-21
Release date:2017-06-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Characterization of a Schistosoma mansoni NDPK expressed in sexual and digestive organs.
Mol.Biochem.Parasitol., 2019
2G99
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Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
Descriptor: Histone H3, WD-repeat protein 5
Authors:Chai, J, Han, Z, Wang, H, Shen, Y.
Deposit date:2006-03-06
Release date:2006-09-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
To be published
2G62
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Crystal structure of human PTPA
Descriptor: GLYCEROL, SULFATE ION, protein phosphatase 2A, ...
Authors:Magnusdottir, A, Stenmark, P, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Hogbom, M, Holmberg Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Nordlund, P.
Deposit date:2006-02-24
Release date:2006-04-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of a human PP2A phosphatase activator reveals a novel fold and highly conserved cleft implicated in protein-protein interactions.
J.Biol.Chem., 281, 2006
5KQR
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Structure of NS5 methyltransferase from Zika virus bound to S-adenosylmethionine
Descriptor: CHLORIDE ION, Methyltransferase, PHOSPHATE ION, ...
Authors:Jain, R, Coloma, J, Rajashankar, K.R, Aggarwal, A.K.
Deposit date:2016-07-06
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.331 Å)
Cite:Structures of NS5 Methyltransferase from Zika Virus.
Cell Rep, 16, 2016
5KR4
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Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
Descriptor: 1,2-ETHANEDIOL, 4-aminobutyrate transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Wilding, M, Newman, J, Peat, T.S, Scott, C.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017

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