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PDB: 17892 results

7N8K
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BU of 7n8k by Molmil
LINE-1 endonuclease domain complex with Mg
Descriptor: ACETATE ION, LINE-1 retrotransposable element ORF2 protein, MAGNESIUM ION, ...
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
8E4G
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BU of 8e4g by Molmil
Remodeling of the bacteriophage T7 during initial infection
Descriptor: Internal virion protein gp14, Internal virion protein gp15, Portal protein, ...
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-08-18
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Virion remodeling of bacteriophage T7 during infection initiation
To Be Published
1W6Q
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BU of 1w6q by Molmil
X-RAY CRYSTAL STRUCTURE OF R111H HUMAN GALECTIN-1
Descriptor: BETA-MERCAPTOETHANOL, GALECTIN-1
Authors:Lopez-Lucendo, M.I.F, Gabius, H.J, Romero, A.
Deposit date:2004-08-21
Release date:2004-10-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding
J.Mol.Biol., 343, 2004
6H6I
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BU of 6h6i by Molmil
Ferric murine neuroglobin Gly-loop mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Exertier, C, Vallone, B, Savino, C, Freda, I, Montemiglio, L.C, Cerutti, G, Scaglione, A, Parisi, G.
Deposit date:2018-07-27
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Proximal and distal control for ligand binding in neuroglobin: role of the CD loop and evidence for His64 gating.
Sci Rep, 9, 2019
2PFF
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BU of 2pff by Molmil
Structural Insights of Yeast Fatty Acid Synthase
Descriptor: Fatty acid synthase subunit alpha, Fatty acid synthase subunit beta, Tail protein
Authors:Xiong, Y, Lomakin, I.B, Steitz, T.A.
Deposit date:2007-04-04
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural Insights of Yeast Fatty Acid Synthase
Cell(Cambridge,Mass.), 129, 2007
3Q0Y
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BU of 3q0y by Molmil
N-terminal domain of C. reinhardtii SAS-6 homolog Bld12p
Descriptor: Centriole protein
Authors:Kitagawa, D, Vakonakis, I, Olieric, N, Hilbert, M, Keller, D, Olieric, V, Bortfeld, M, Erat, M.C, Flueckiger, I, Goenczy, P, Steinmetz, M.O.
Deposit date:2010-12-16
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the 9-fold symmetry of centrioles.
Cell(Cambridge,Mass.), 144, 2011
4TK5
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BU of 4tk5 by Molmil
Crystal Structure of human Tankyrase 2 in complex with EB47.
Descriptor: 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, Tankyrase-2, ZINC ION
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-25
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
8EEW
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BU of 8eew by Molmil
CryoEM of the soluble OPA1 dimer from the GDP-AlFx bound helical assembly on a lipid membrane
Descriptor: Dynamin-like 120 kDa protein, form S1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Nyenhuis, S.B, Wu, X, Stanton, A.E, Strub, M.P, Yim, Y.I, Canagarajah, B, Hinshaw, J.E.
Deposit date:2022-09-07
Release date:2023-06-28
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (5.48 Å)
Cite:OPA1 helical structures give perspective to mitochondrial dysfunction.
Nature, 620, 2023
8EFF
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BU of 8eff by Molmil
CryoEM of the soluble OPA1 tetramer from the GDP-AlFx bound helical assembly on a lipid membrane
Descriptor: Dynamin-like 120 kDa protein, form S1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Nyenhuis, S.B, Wu, X, Stanton, A.E, Strub, M.P, Yim, Y.I, Canagarajah, B, Hinshaw, J.E.
Deposit date:2022-09-08
Release date:2023-06-28
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (5.48 Å)
Cite:OPA1 helical structures give perspective to mitochondrial dysfunction.
Nature, 620, 2023
7N72
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BU of 7n72 by Molmil
Cryo-EM structure of ATP13A2 in the AlF-bound E2-Pi-like state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Sim, S.I, Park, E.
Deposit date:2021-06-09
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis of polyamine transport by human ATP13A2 (PARK9).
Mol.Cell, 81, 2021
7N78
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BU of 7n78 by Molmil
Cryo-EM structure of ATP13A2 in the E2-Pi state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Sim, S.I, Park, E.
Deposit date:2021-06-09
Release date:2021-11-10
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of polyamine transport by human ATP13A2 (PARK9).
Mol.Cell, 81, 2021
3JQ4
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BU of 3jq4 by Molmil
The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-dihydroxy-1,4,10,19-tetramethyl-17,18-dioxo-16-oxabicyclo[13.2.2]nonadeca-3,5,9,11-tetraen-2-yl]-2-oxopropanamide
Authors:Auerbach-Nevo, T, Mermershtain, I, Davidovich, C, Bashan, A, Rozenberg, H, Yonath, A.
Deposit date:2009-09-06
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:The structure of ribosome-lankacidin complex reveals ribosomal sites for synergistic antibiotics
Proc.Natl.Acad.Sci.USA, 107, 2010
8GL5
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BU of 8gl5 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEU-AIB-ALA-SER-LEU-ALA-SNC-AIB-LEU, NICOTINIC ACID
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-20
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
3CI1
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BU of 3ci1 by Molmil
Structure of the PduO-type ATP:co(I)rrinoid adenosyltransferase from Lactobacillus reuteri complexed with four-coordinate cob(II)alamin and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, COBALAMIN, Cobalamin adenosyltransferase PduO-like protein, ...
Authors:Maurice, M.St, Mera, P.E, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2008-03-10
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of a human-type corrinoid adenosyltransferase confirms that coenzyme B12 is synthesized through a four-coordinate intermediate.
Biochemistry, 47, 2008
8GBH
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BU of 8gbh by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEU-(AIB)-ALA-SER-LEU-ALA-(OCS)-(AIB)-LEU, NICOTINIC ACID
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-26
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GD6
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BU of 8gd6 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, NICOTINIC ACID, NIO-LEU-AIB-ALA-AIB-LEU-AIB-CYS-AIB-LEU-BPH
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-03
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
4RQS
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BU of 4rqs by Molmil
Crystal structure of fully glycosylated HIV-1 gp120 core bound to CD4 and 17b Fab
Descriptor: 17b Fab Heavy Chain, 17b Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kong, L, Wilson, I.A, Kwong, P.D.
Deposit date:2014-11-05
Release date:2014-12-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.493 Å)
Cite:Crystal structure of a fully glycosylated HIV-1 gp120 core reveals a stabilizing role for the glycan at Asn262.
Proteins, 83, 2015
8GB9
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BU of 8gb9 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEAD (II) ION, LEU-AIB-ALA-SER-LEU-ALA-CYS-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-24
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GBO
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BU of 8gbo by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEU-AIB-ALA-AIB-LEU-CYS-GLN-AIB-LEU, NICOTINIC ACID
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-26
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GIV
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BU of 8giv by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, BEZ-LEU-AIB-ALA-AIB-LEU-CYS-GLN-AIB-LEU-BPH
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-14
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
4GFA
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BU of 4gfa by Molmil
N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Spindle assembly abnormal protein 6
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-08-03
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
2Z4O
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BU of 2z4o by Molmil
Wild Type HIV-1 Protease with potent Antiviral inhibitor GRL-98065
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(2S,3R)-3-HYDROXY-4-(N-ISOBUTYLBENZO[D][1,3]DIOXOLE-5-SULFONAMIDO)-1-PHENYLBUTAN-2-YLCARBAMATE, ACETATE ION, CHLORIDE ION, ...
Authors:Wang, Y.F, Tie, Y, Boross, P.I, Tozser, J, Ghosh, A.K, Harrison, R.W, Weber, I.T.
Deposit date:2007-06-20
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent new antiviral compound shows similar inhibition and structural interactions with drug resistant mutants and wild type HIV-1 protease.
J.Med.Chem., 50, 2007
6HC8
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BU of 6hc8 by Molmil
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339)
Descriptor: GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
Authors:Leissing, T.M, Clifton, I.J, Saward, B.G, Lu, X, Hopkinson, R.J, Schofield, C.J.
Deposit date:2018-08-14
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339)
To Be Published
6F6N
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BU of 6f6n by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH SERTRALINE
Descriptor: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-05
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
4P2V
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BU of 4p2v by Molmil
Structure of the AI-2 processing enzyme LsrF in complex with the product of the LsrG reaction P-HPD
Descriptor: (3R)-3-hydroxy-2,4-dioxopentyl dihydrogen phosphate, Uncharacterized aldolase LsrF
Authors:Miller, S.T, Oh, I.K, Xavier, K.B.
Deposit date:2014-03-04
Release date:2014-09-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:LsrF, a coenzyme A-dependent thiolase, catalyzes the terminal step in processing the quorum sensing signal autoinducer-2.
Proc.Natl.Acad.Sci.USA, 111, 2014

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