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PDB: 26 results

8BBH
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BU of 8bbh by Molmil
The crystal structure of a mouse Fab fragment TL1 in complex with a human Glucose-6-phosphate isomerase peptide 293-307
Descriptor: Glucose-6-phosphate isomerase, Heavy Chain of TL1 Fab fragment, Light Chain of TL1 Fab fragment
Authors:Ge, C, Holmdahl, R, Li, T.
Deposit date:2022-10-13
Release date:2022-12-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:Pathogenic antibody response to glucose-6-phosphate isomerase targets a modified epitope uniquely exposed on joint cartilage.
Ann Rheum Dis, 82, 2023
7O00
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BU of 7o00 by Molmil
Crystal structure of HLA-DR4 in complex with a HSP70 peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chaperone protein DnaK, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2021-03-25
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Key interactions in the trimolecular complex consisting of the rheumatoid arthritis-associated DRB1*04:01 molecule, the major glycosylated collagen II peptide and the T-cell receptor.
Ann Rheum Dis, 81, 2022
7NZH
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BU of 7nzh by Molmil
Crystal structure of HLA-DR4 in complex with a citrullinated cilp peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2021-03-24
Release date:2022-05-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.831 Å)
Cite:Key interactions in the trimolecular complex consisting of the rheumatoid arthritis-associated DRB1*04:01 molecule, the major glycosylated collagen II peptide and the T-cell receptor.
Ann Rheum Dis, 81, 2022
7NZF
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BU of 7nzf by Molmil
Crystal structure of HLA-DR4 in complex with a mutated human collagen type II peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Ge, C, Dobritzsch, D, Holmdahl, R.
Deposit date:2021-03-24
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Key interactions in the trimolecular complex consisting of the rheumatoid arthritis-associated DRB1*04:01 molecule, the major glycosylated collagen II peptide and the T-cell receptor.
Ann Rheum Dis, 81, 2022
6SF6
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BU of 6sf6 by Molmil
Crystal structure of the mAb 15A in complex with COMP-epitope P6
Descriptor: COMP-reactive monoclonal antibody 15A Fab fragment, heavy chain, light chain, ...
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2019-08-01
Release date:2020-06-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antibodies to cartilage oligomeric matrix protein in vivo are pathogenic and clinically relevant in rheumatoid arthritis
To Be Published
4BKL
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BU of 4bkl by Molmil
Crystal structure of the arthritogenic antibody M2139 (Fab fragment) in complex with the triple-helical J1 peptide
Descriptor: J1 EPITOPE, M2139 FAB FRAGMENT HEAVY CHAIN, M2139 FAB FRAGMENT LIGHT CHAIN
Authors:Raposo, B, Dobritzsch, D, Ge, C, Ekman, D, Lindh, I, Foerster, M, Uysal, H, Schneider, G, Holmdahl, R.
Deposit date:2013-04-26
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Epitope-Specific Antibody Response is Controlled by Immunoglobulin Vh Polymorphisms.
J.Exp.Med., 211, 2014
2Y5T
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BU of 2y5t by Molmil
Crystal structure of the pathogenic autoantibody CIIC1 in complex with the triple-helical C1 peptide
Descriptor: C1, CHLORIDE ION, CIIC1 FAB FRAGMENT HEAVY CHAIN, ...
Authors:Dobritzsch, D, Lindh, I, Schneider, N, Uysal, H, Nandakumar, K.S, Burkhardt, H, Schneider, G, Holmdahl, R.
Deposit date:2011-01-17
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of an Arthritogenic Anticollagen Immune Complex.
Arthritis Rheum., 63, 2011
7NZE
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BU of 7nze by Molmil
Crystal structure of HLA-DR4 in complex with a human collagen type II peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Collagen alpha-1(II) chain, GLYCEROL, ...
Authors:Ge, C, Dobritzsch, D, Holmdahl, R.
Deposit date:2021-03-24
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Key interactions in the trimolecular complex consisting of the rheumatoid arthritis-associated DRB1*04:01 molecule, the major glycosylated collagen II peptide and the T-cell receptor.
Ann Rheum Dis, 81, 2022
2W65
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BU of 2w65 by Molmil
Anti citrullinated Collagen type 2 antibody acc4 in complex with a citrullinated peptide
Descriptor: ANTI-CITRULLINATED COLLAGEN TYPE II FAB ACC4, COLLAGEN DERIVED PEPTIDE PCII-CIT1, SULFATE ION
Authors:Uysal, H, Bockermann, R, Nandakumar, K.S, Sehnert, B, Bajtner, E, Engstrom, A, Serre, G, Burkhardt, H, Thunnissen, M.M.G.M, Holmdahl, R.
Deposit date:2008-12-17
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure and pathogenicity of antibodies specific for citrullinated collagen type II in experimental arthritis.
J. Exp. Med., 206, 2009
2W60
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BU of 2w60 by Molmil
Anti citrullinated Collagen type 2 antibody acc4
Descriptor: ANTI-CITRULLINATED COLLAGEN TYPE II FAB ACC4, NITRATE ION
Authors:Uysal, H, Bockermann, R, Nandakumar, K.S, Sehnert, B, Bajtner, E, Engstrom, A, Serre, G, Burkhardt, H, Thunnissen, M.M.G.M, Holmdahl, R.
Deposit date:2008-12-16
Release date:2009-02-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and pathogenicity of antibodies specific for citrullinated collagen type II in experimental arthritis.
J. Exp. Med., 206, 2009
6YXL
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BU of 6yxl by Molmil
Crystal structure of ACPA F3
Descriptor: ACPA F3 Fab fragment - heavy chain, ACPA F3 Fab fragment - light chain, GLYCEROL, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2020-05-03
Release date:2021-05-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation.
Sci Adv, 8, 2022
6YXM
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BU of 6yxm by Molmil
Crystal structure of ACPA 1F2 in complex with CII-C-39-CIT
Descriptor: ACPA 1F2 Fab fragment - heavy chain, ACPA 1F2 Fab fragment - light chain, CII-C-39-CIT, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2020-05-03
Release date:2021-05-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation.
Sci Adv, 8, 2022
6YXK
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BU of 6yxk by Molmil
Crystal structure of ACPA 3F3 in complex with cit-vimentin 59-74
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACPA 3F3 Fab fragment - heavy chain, ACPA 3F3 Fab fragment - light chain, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2020-05-03
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation.
Sci Adv, 8, 2022
2VL5
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BU of 2vl5 by Molmil
Structure of anti-collagen type II FAb CIIC1
Descriptor: CIIC1 ANTICOLLAGEN FAB
Authors:Uysal, H, Sehnert, B, Nandakumar, K.S, Boiers, U, Burkhardt, H, Holmdahl, R, Thunnissen, M.M.
Deposit date:2008-01-08
Release date:2008-03-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of the Pathogenic Collagen Type II-Specific Mouse Monoclonal Antibody Ciic1 Fab: Structure to Function Analysis.
Mol.Immunol., 45, 2008
5MUB
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BU of 5mub by Molmil
ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (CG05)
Descriptor: ACC1 Fab fragment heavy chain, ACC1 Fab fragment light chain, triple-helical peptide containing the citrullinated C1 epitope of collagen type II,Collagen alpha-1(II) chain,triple-helical peptide containing the citrullinated C1 epitope of collagen type II
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-13
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MU0
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BU of 5mu0 by Molmil
ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (IA03)
Descriptor: IA03 peptide containing the citrullinated C1 epitope of collagen type II,Collagen alpha-1(II) chain,IA03 peptide containing the citrullinated C1 epitope of collagen type II, heavy chain of ACC1 antibody Fab fragment, light chain of ACC1 antibody Fab fragment
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-11
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MV3
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BU of 5mv3 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
Descriptor: heavy chain of ACC1 Fab fragment, light chain of ACC1 Fab fragment, synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II,
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-15
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5OD0
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BU of 5od0 by Molmil
Crystal structure of ACPA E4
Descriptor: Fab fragment of ACPA E4 - Light chain, Fab fragment of ACPA E4 - heavy chain, GLYCEROL
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2017-07-04
Release date:2018-07-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019
5OCY
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BU of 5ocy by Molmil
Crystal structure of ACPA E4 in complex with CII-C-48-CIT
Descriptor: ACPA E4 Fab fragment - heavy chain, ACPA E4 Fab fragment - light chain, CII-C-48-CIT
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2017-07-04
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019
5OCK
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BU of 5ock by Molmil
Crystal structure of ACPA E4 in complex with CEP1
Descriptor: CEP1 peptide (from enolase), Human ACPA E4 Fab fragment - Heavy chain, Human ACPA E4 Fab fragment - Light chain
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2017-07-03
Release date:2018-07-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019
5ODB
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BU of 5odb by Molmil
Crystal structure of the RA-associated mAb D10 (chimeric Fab fragment)
Descriptor: D10 Fab fragment - heavy chain, D10 Fab fragment - light chain, GLYCEROL, ...
Authors:Dobritzsch, D, Ge, C, Holmdahl, R, Amara, K, Malmstrom, V.
Deposit date:2017-07-05
Release date:2018-07-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019
5OCX
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BU of 5ocx by Molmil
Crystal structure of ACPA E4 in complex with CII-C-13-CIT
Descriptor: 1,2-ETHANEDIOL, CII-C-13-CIT, Fab fragment anti-citrullinated protein antibody E4 - light chain, ...
Authors:Dobritzsch, D, Ge, C, Holmdahl, R.
Deposit date:2017-07-04
Release date:2018-07-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019
5MV4
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BU of 5mv4 by Molmil
ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23)
Descriptor: ACC1 antibody Fab fragment, heavy chain, light chain, ...
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-15
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MU2
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BU of 5mu2 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
Descriptor: ACC1 Fab fragment heavy chain, ACC1 Fab fragment light chain, synthetic peptide containing the CII583-591 epitope of collagen type II
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-12
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5OD8
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BU of 5od8 by Molmil
Crystal structure of the RA-associated mAb B2 (Fab fragment)
Descriptor: B2 Fab fragment - Light chain, B2 Fab fragment - heavy chain
Authors:Dobritzsch, D, Ge, C, Holmdahl, R, Amara, K, Malmstrom, V.
Deposit date:2017-07-05
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies.
Arthritis Rheumatol, 71, 2019

 

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