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PDB: 613 results

7K0J
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Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa protomer
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0Q
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Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, myriocin-bound
Descriptor: Myriocin, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0L
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Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa, myriocin-bound
Descriptor: Myriocin, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0P
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Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, class 4
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0M
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Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, class 1
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
8OW0
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Cryo-EM structure of CBF1-CCAN bound topologically to a centromeric CENP-A nucleosome
Descriptor: C0N3 DNA, Centromere-binding protein 1, Histone H2A.1, ...
Authors:Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S, Barford, D.
Deposit date:2023-04-26
Release date:2023-08-09
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
8OVX
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Cryo-EM structure of yeast CENP-OPQU+ bound to the CENP-A N-terminus
Descriptor: Inner kinetochore subunit AME1, Inner kinetochore subunit CTF19, Inner kinetochore subunit MCM21, ...
Authors:Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S.
Deposit date:2023-04-26
Release date:2023-08-09
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
8OVW
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BU of 8ovw by Molmil
Cryo-EM structure of CBF1-CCAN bound topologically to centromeric DNA
Descriptor: C0N3 DNA, Centromere-binding protein 1, Inner kinetochore subunit AME1, ...
Authors:Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S, Barford, D.
Deposit date:2023-04-26
Release date:2023-08-09
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
8OW1
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Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.
Descriptor: C0N3, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
Authors:Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S, Barford, D.
Deposit date:2023-04-26
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
5UAK
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BU of 5uak by Molmil
Dephosphorylated, ATP-free human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: Cystic fibrosis transmembrane conductance regulator
Authors:Liu, F, Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Molecular Structure of the Human CFTR Ion Channel.
Cell, 169, 2017
3TN6
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Crystal structure of GkaP mutant R230H from Geobacillus kaustophilus HTA426
Descriptor: COBALT (II) ION, Phosphotriesterase
Authors:An, J, Zhang, Z, Zhang, Y, Feng, Y, Wu, G.
Deposit date:2011-09-01
Release date:2012-09-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering a thermostable lactonase for enhanced phosphotriesterase activity against organophosphate pesticides
to be published
3TNB
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Crystal structure of GkaP mutant G209D/R230H from Geobacillus kaustophilus HTA426
Descriptor: COBALT (II) ION, Phosphotriesterase
Authors:An, J, Zhang, Z, Zhang, Y, Feng, Y, Wu, G.
Deposit date:2011-09-01
Release date:2012-09-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering a thermostable lactonase for enhanced phosphotriesterase activity against organophosphate pesticides
to be published
5Z09
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BU of 5z09 by Molmil
ST0452(Y97N)-UTP binding form
Descriptor: Dual sugar-1-phosphate nucleotidylyltransferase, URIDINE 5'-TRIPHOSPHATE
Authors:Honda, Y, Nakano, S, Ito, S, Dadashipour, M, Zhang, Z, Kawarabayasi, Y.
Deposit date:2017-12-19
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Improvement of ST0452N-Acetylglucosamine-1-Phosphate Uridyltransferase Activity by the Cooperative Effect of Two Single Mutations Identified through Structure-Based Protein Engineering
Appl. Environ. Microbiol., 84, 2018
5Z0A
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BU of 5z0a by Molmil
ST0452(Y97N)-GlcNAc binding form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Dual sugar-1-phosphate nucleotidylyltransferase
Authors:Honda, Y, Nakano, S, Ito, S, Dadashipour, M, Zhang, Z, Kawarabayasi, Y.
Deposit date:2017-12-19
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Improvement of ST0452N-Acetylglucosamine-1-Phosphate Uridyltransferase Activity by the Cooperative Effect of Two Single Mutations Identified through Structure-Based Protein Engineering
Appl. Environ. Microbiol., 84, 2018
8WH9
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BU of 8wh9 by Molmil
Structure of DDM1-nucleosome complex in ADP-BeFx state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Liu, Y, Zhang, Z, Du, J.
Deposit date:2023-09-22
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
3TN5
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Crystal structure of GkaP mutant Y99L from Geobacillus kaustophilus HTA426
Descriptor: COBALT (II) ION, PHOSPHATE ION, Phosphotriesterase
Authors:An, J, Zhang, Z, Zhang, Y, Feng, Y, Wu, G.
Deposit date:2011-09-01
Release date:2012-09-12
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Engineering a thermostable lactonase for enhanced phosphotriesterase activity against organophosphate pesticides
to be published
8XV5
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BU of 8xv5 by Molmil
Pyridoxamine-bound human SLC19A3
Descriptor: 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL, Soluble cytochrome b562,Thiamine transporter 2
Authors:Dang, Y, Wang, G.P, Zhang, Z.
Deposit date:2024-01-14
Release date:2024-03-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Substrate and drug recognition mechanisms of SLC19A3.
Cell Res., 34, 2024
8XV9
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BU of 8xv9 by Molmil
Fedratinib-bound human SLC19A3
Descriptor: N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide, Soluble cytochrome b562,Thiamine transporter 2
Authors:Dang, Y, Wang, G.P, Zhang, Z.
Deposit date:2024-01-14
Release date:2024-03-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Substrate and drug recognition mechanisms of SLC19A3.
Cell Res., 34, 2024
8XV2
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BU of 8xv2 by Molmil
Thiamine-bound human SLC19A3
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, Soluble cytochrome b562,Thiamine transporter 2
Authors:Dang, Y, Wang, G.P, Zhang, Z.
Deposit date:2024-01-14
Release date:2024-03-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Substrate and drug recognition mechanisms of SLC19A3.
Cell Res., 34, 2024
6B70
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BU of 6b70 by Molmil
Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11-E heavy chain, FAB H11-E light chain and insulin
Descriptor: FAB H11-E heavy chain, FAB H11-E light chain, Insulin, ...
Authors:Liang, W.G, Zhang, Z, Bailey, L.J, Kossiakoff, A.A, Tan, Y.Z, Wei, H, Carragher, B, Potter, S.C, Tang, W.J.
Deposit date:2017-10-03
Release date:2017-12-27
Last modified:2021-04-28
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme.
Elife, 7, 2018
2GAS
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BU of 2gas by Molmil
Crystal Structure of Isoflavone Reductase
Descriptor: isoflavone reductase
Authors:Wang, X, He, X, Lin, J, Shao, H, Chang, Z, Dixon, R.A.
Deposit date:2006-03-09
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Isoflavone Reductase from Alfalfa (Medicago sativa L.)
J.Mol.Biol., 358, 2006
2OEH
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Determination of the Three-dimensional Structure of the Mrf2-DNA Complex Using Paramagnetic Spin Labeling
Descriptor: 5'-D(P*CP*GP*AP*CP*GP*TP*TP*AP*TP*AP*TP*TP*GP*T)-3', 5'-D(P*TP*AP*CP*AP*AP*TP*AP*TP*AP*AP*CP*GP*TP*CP*G)-3', AT-rich interactive domain-containing protein 5B
Authors:Cai, S, Zhu, L, Zhang, Z.
Deposit date:2006-12-29
Release date:2007-08-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Determination of the three-dimensional structure of the Mrf2-DNA complex using paramagnetic spin labeling.
Biochemistry, 46, 2007
2ONC
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BU of 2onc by Molmil
Crystal structure of human DPP-4
Descriptor: 2-({2-[(3R)-3-AMINOPIPERIDIN-1-YL]-4-OXOQUINAZOLIN-3(4H)-YL}METHYL)BENZONITRILE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Feng, J, Zhang, Z, Wallace, M.B, Stafford, J.A, Kaldor, S.W, Kassel, D.B, Navre, M, Shi, L, Skene, R.J, Asakawa, T, Takeuchi, K, Xu, R, Webb, D.R, Gwaltney, S.L.
Deposit date:2007-01-23
Release date:2008-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Discovery of alogliptin: a potent, selective, bioavailable, and efficacious inhibitor of dipeptidyl peptidase IV.
J.Med.Chem., 50, 2007
6BF8
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BU of 6bf8 by Molmil
Cryo-EM structure of human insulin degrading enzyme in complex with insulin
Descriptor: Insulin-degrading enzyme
Authors:Liang, W.G, Zhang, Z, Bailey, L.J, Kossiakoff, A.A, Tan, Y.Z, Wei, H, Carragher, B, Potter, S.C, Tang, W.J.
Deposit date:2017-10-26
Release date:2018-04-04
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme.
Elife, 7, 2018
6BF7
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Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11-E heavy chain, FAB H11-E light chain
Descriptor: Fab H11-E heavy chain, Fab H11-E light chain, Insulin-degrading enzyme
Authors:Liang, W.G, Zhang, Z, Bailey, L.J, Kossiakoff, A.A, Tan, Y.Z, Wei, H, Carragher, B, Potter, S.C, Tang, W.J.
Deposit date:2017-10-26
Release date:2018-02-07
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme.
Elife, 7, 2018

223532

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