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PDB: 88911 results

1KF2
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Atomic Resolution Structure of RNase A at pH 5.2
Descriptor: SULFATE ION, pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
5IMB
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BU of 5imb by Molmil
Crystal structure of peptidyl-tRNA hydrolase mutant-N14D from Vibrio cholerae
Descriptor: Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-03-06
Release date:2017-03-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
1KG6
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BU of 1kg6 by Molmil
Crystal structure of the K142R mutant of E.coli MutY (core fragment)
Descriptor: A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G.
Deposit date:2001-11-26
Release date:2002-11-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis
To be Published
5IN3
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BU of 5in3 by Molmil
Crystal structure of glucose-1-phosphate bound nucleotidylated human galactose-1-phosphate uridylyltransferase
Descriptor: 1,2-ETHANEDIOL, 1-O-phosphono-alpha-D-glucopyranose, 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE, ...
Authors:Kopec, J, McCorvie, T, Tallant, C, Velupillai, S, Shrestha, L, Fitzpatrick, F, Patel, D, Chalk, R, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
Deposit date:2016-03-07
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Molecular basis of classic galactosemia from the structure of human galactose 1-phosphate uridylyltransferase.
Hum.Mol.Genet., 25, 2016
6XGV
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BU of 6xgv by Molmil
Crystal Structure of KRAS-G13D (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF
Descriptor: CHLORIDE ION, GLYCEROL, GTPase KRas, ...
Authors:Tran, T.H, Chan, A.H, Dharmaiah, S, Simanshu, D.K.
Deposit date:2020-06-18
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.
Nat Commun, 12, 2021
8C77
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BU of 8c77 by Molmil
Human cathepsin L after reaction with the thiocarbazate inhibitor CID 16725315
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cathepsin L, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-01-12
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
6XC7
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BU of 6xc7 by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.3 and CR3022
Descriptor: CC12.3 heavy chain, CC12.3 light chain, CR3022 heavy chain, ...
Authors:Yuan, M, Liu, H, Wu, N.C, Zhu, X, Wilson, I.A.
Deposit date:2020-06-08
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.883 Å)
Cite:Structural basis of a shared antibody response to SARS-CoV-2.
Science, 369, 2020
6OQ1
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BU of 6oq1 by Molmil
Crystal Structure of Branched K11/K48-Linked Tri-Ubiquitin
Descriptor: Ubiquitin
Authors:Boughton, A.J, Fushman, D.
Deposit date:2019-04-25
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Branching via K11 and K48 Bestows Ubiquitin Chains with a Unique Interdomain Interface and Enhanced Affinity for Proteasomal Subunit Rpn1.
Structure, 28, 2020
2P5L
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BU of 2p5l by Molmil
Crystal structure of a dimer of N-terminal domains of AhrC in complex with an 18bp DNA operator site
Descriptor: Arginine repressor, DNA (5'-D(*DCP*DAP*DTP*DGP*DAP*DAP*DTP*DAP*DAP*DAP*DAP*DAP*DTP*DTP*DCP*DAP*DAP*DG)-3'), DNA (5'-D(*DCP*DTP*DTP*DGP*DAP*DAP*DTP*DTP*DTP*DTP*DTP*DAP*DTP*DTP*DCP*DAP*DTP*DG)-3'), ...
Authors:Garnett, J.A, Marincs, F, Baumberg, S, Stockley, P.G, Phillips, S.E.V.
Deposit date:2007-03-15
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and function of the arginine repressor-operator complex from Bacillus subtilis.
J.Mol.Biol., 379, 2008
8CE7
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BU of 8ce7 by Molmil
Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Descriptor: Alpha-synuclein
Authors:Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Peak-Chew, S.Y, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M.
Deposit date:2023-02-01
Release date:2023-03-01
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy.
Acta Neuropathol, 145, 2023
1KP5
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BU of 1kp5 by Molmil
Cyclic Green Fluorescent Protein
Descriptor: Green Fluorescent Protein, SULFATE ION
Authors:Hofmann, A, Iwai, H, Plueckthun, A, Wlodawer, A.
Deposit date:2001-12-28
Release date:2002-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of cyclized green fluorescent protein.
Acta Crystallogr.,Sect.D, 58, 2002
5I3Y
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BU of 5i3y by Molmil
Crystal structure of BACE1 in complex with aminoquinoline inhibitor 9
Descriptor: Beta-secretase 1, N-(6-{2-[2-(2-amino-3-{3-[(3,3-dimethylbutyl)amino]-3-oxopropyl}quinolin-6-yl)phenyl]ethyl}pyridin-3-yl)-4-fluorobenzamide
Authors:Whittington, D.A, Long, A.M.
Deposit date:2016-02-11
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Fragment-Linking Approach Using (19)F NMR Spectroscopy To Obtain Highly Potent and Selective Inhibitors of beta-Secretase.
J.Med.Chem., 59, 2016
7NO0
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BU of 7no0 by Molmil
Structure of the mature RSV CA lattice: T=1 CA icosahedron
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021
5I4D
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BU of 5i4d by Molmil
1.75 Angstrom Crystal Structure of Superantigen-like Protein, Exotoxin from Staphylococcus aureus, in Complex with Sialyl-LewisX.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose, Superantigen-like protein, ...
Authors:Minasov, G, Nocadello, S, Shuvalova, L, Filippova, E.V, Halavaty, A, Dubrovska, I, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-02-11
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:1.75 Angstrom Crystal Structure of Superantigen-like Protein, Exotoxin from Staphylococcus aureus, in Complex with Sialyl-LewisX.
To Be Published
3JT0
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BU of 3jt0 by Molmil
Crystal Structure of the C-terminal fragment (426-558) Lamin-B1 from Homo sapiens, Northeast Structural Genomics Consortium Target HR5546A
Descriptor: Lamin-B1
Authors:Kuzin, A, Abashidze, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-09-11
Release date:2009-09-22
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:Northeast Structural Genomics Consortium Target HR5546A
To be Published
8CEB
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BU of 8ceb by Molmil
Type2 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Descriptor: Alpha-synuclein
Authors:Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Sew, P.C, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M.
Deposit date:2023-02-01
Release date:2023-03-08
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy.
Acta Neuropathol, 145, 2023
7NGQ
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BU of 7ngq by Molmil
Human mitochondrial Lon protease homolog, D2-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Mohammed, I, Abrahams, J.P, Schmitz, K.A, Maier, T, Schenck, N.
Deposit date:2021-02-09
Release date:2021-04-28
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Catalytic cycling of human mitochondrial Lon protease.
Structure, 30, 2022
1KXI
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BU of 1kxi by Molmil
STRUCTURE OF CYTOTOXIN HOMOLOG PRECURSOR
Descriptor: CARDIOTOXIN V
Authors:Sun, Y.-J, Wu, W.-G, Chiang, C.-M, Hsin, A.-Y, Hsiao, C.-D.
Deposit date:1996-08-29
Release date:1997-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal structure of cardiotoxin V from Taiwan cobra venom: pH-dependent conformational change and a novel membrane-binding motif identified in the three-finger loops of P-type cardiotoxin.
Biochemistry, 36, 1997
5I8S
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BU of 5i8s by Molmil
Structure of Mouse Acireductone dioxygenase with Ni2+ ion and pentanoic acid in the active site
Descriptor: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, NICKEL (II) ION, PENTANOIC ACID
Authors:Deshpande, A.R, Wagenpfeil, K, Pochapsky, T.C, Petsko, G.A, Ringe, D.
Deposit date:2016-02-19
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.
Biochemistry, 55, 2016
1KVQ
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BU of 1kvq by Molmil
UDP-GALACTOSE 4-EPIMERASE COMPLEXED WITH UDP-PHENOL
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Thoden, J.B, Gulick, A.M, Holden, H.M.
Deposit date:1997-03-07
Release date:1998-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular structures of the S124A, S124T, and S124V site-directed mutants of UDP-galactose 4-epimerase from Escherichia coli.
Biochemistry, 36, 1997
7NGP
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BU of 7ngp by Molmil
D1-state of wild type human mitochondrial LONP1 protease
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Mohammed, I, Schmitz, K.A, Schenck, N, Maier, T, Abrahams, J.P.
Deposit date:2021-02-09
Release date:2021-04-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (15 Å)
Cite:Catalytic cycling of human mitochondrial Lon protease.
Structure, 30, 2022
5ICJ
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BU of 5icj by Molmil
Crystal structure of the Mycobacterium tuberculosis transcriptional repressor EthR2 in complex with BDM41420
Descriptor: 4,4,4-trifluoro-1-(3-phenyl-1-oxa-2,8-diazaspiro[4.5]dec-2-en-8-yl)butan-1-one, Probable transcriptional regulatory protein
Authors:Wohlkonig, A, Remaut, H, Tanina, A, Meyer, F, Willand, N, Baulard, A.R, Wintjens, R.
Deposit date:2016-02-23
Release date:2017-04-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420.
Science, 355, 2017
5IAE
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BU of 5iae by Molmil
Caspase 3 V266F
Descriptor: ACE-ASP-GLU-VAL-ASK, ACETATE ION, CHLORIDE ION, ...
Authors:Maciag, J.J, Mackenzie, S.H, Tucker, M.B, Schipper, J.L, Swartz, P.D, Clark, A.C.
Deposit date:2016-02-21
Release date:2016-10-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection.
Proc.Natl.Acad.Sci.USA, 113, 2016
8C5J
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BU of 8c5j by Molmil
Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21
Descriptor: Lantibiotic lichenicidin VK21 A1
Authors:Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O.
Deposit date:2023-01-09
Release date:2023-03-22
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity.
Int J Mol Sci, 24, 2023
5ID9
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Crystal structure of equine serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cPA)
Descriptor: (4S)-2-sulfanylidene-4-[(tetradecanoyloxy)methyl]-1,3,2lambda~5~-dioxaphospholane-2-thiolate, FORMIC ACID, MALONATE ION, ...
Authors:Sekula, B, Bujacz, A, Rytczak, P, Bujacz, G.
Deposit date:2016-02-24
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural evidence of the species-dependent albumin binding of the modified cyclic phosphatidic acid with cytotoxic properties.
Biosci.Rep., 36, 2016

224201

数据于2024-08-28公开中

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