5I8S

Structure of Mouse Acireductone dioxygenase with Ni2+ ion and pentanoic acid in the active site

Summary for 5I8S

Related5I8T 5I93 5I91 5I8Y
Descriptor1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, NICKEL (II) ION, PENTANOIC ACID, ... (4 entities in total)
Functional Keywordsproduct analog, off-pathway chemistry, oxidoreductase
Biological sourceMus musculus (Mouse)
Total number of polymer chains1
Total molecular weight21715.4
Authors
Deshpande, A.R.,Wagenpfeil, K.,Pochapsky, T.C.,Petsko, G.A.,Ringe, D. (deposition date: 2016-02-19, release date: 2016-03-09, Last modification date: 2019-12-25)
Primary citation
Deshpande, A.R.,Wagenpfeil, K.,Pochapsky, T.C.,Petsko, G.A.,Ringe, D.
Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.
Biochemistry, 55:1398-1407, 2016
PubMed: 26858196 (PDB entries with the same primary citation)
DOI: 10.1021/acs.biochem.5b01319
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.89 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.205402.0%7.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload