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PDB: 89111 件

6R0L
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Histone fold domain of OsGhd8/NF-YC7 in I2
分子名称: GLYCEROL, OsGhd8, OsNF-YC7
著者Chaves-Sanjuan, A, Gobbini, A, Nardini, M.
登録日2019-03-13
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
5WUF
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BU of 5wuf by Molmil
Structural basis for conductance through TRIC cation channels
分子名称: CADMIUM ION, Putative membrane protein
著者Mao, Y, Gao, F, Su, M, Wang, X.H, Zeng, Y, Bruni, R, Kloss, B, Hendrickson, W.A, Chen, Y.H, New York Consortium on Membrane Protein Structure (NYCOMPS)
登録日2016-12-17
公開日2017-08-09
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural basis for conductance through TRIC cation channels.
Nat Commun, 8, 2017
7L9E
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BU of 7l9e by Molmil
Crystal structure of apo-alpha glucosidase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-01-03
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
6DAX
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X-ray crystal structure of VioC bound to Fe(II), L-homoarginine, and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2018-05-02
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
7QR6
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Stilbene dioxygenase (NOV1) from Novosphingobium aromaticivorans: Ser283Phe mutant
分子名称: Dioxygenase, FE (III) ION, OXYGEN MOLECULE
著者Alvigini, L, Mattevi, A.
登録日2022-01-10
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Rationally Guided Improvement of NOV1 Dioxygenase for the Conversion of Lignin-Derived Isoeugenol to Vanillin.
Biochemistry, 62, 2023
6HFF
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Human dihydroorotase mutant F1563Y apo structure
分子名称: CAD protein, FORMIC ACID, ZINC ION
著者Ramon-Maiques, S, Grande Garcia, A.
登録日2018-08-21
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51000106 Å)
主引用文献Characterization of the catalytic flexible loop in the dihydroorotase domain of the human multi-enzymatic protein CAD.
J. Biol. Chem., 293, 2018
6R0M
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BU of 6r0m by Molmil
Histone fold domain of AtNF-YB2/NF-YC3 in P212121
分子名称: NF-YB2, NF-YC3
著者Chaves-Sanjuan, A, Gnesutta, N, Chiara, M, Bernardini, A, Fornara, F, Horner, D, Nardini, M, Mantovani, R.
登録日2019-03-13
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
6R0T
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BU of 6r0t by Molmil
Getah virus macro domain in complex with ADPr in open conformation
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Non-structural polyprotein, ...
著者Ferreira Ramos, A.S, Sulzenbacher, G, Coutard, B.
登録日2019-03-13
公開日2020-04-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
4QJV
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BU of 4qjv by Molmil
The X-ray crystal structure of Rpo3/Rpo11 heterodimer of euryarchaeal RNA polymerase from Thermococcus kodakarensis
分子名称: DNA-directed RNA polymerase subunit D, DNA-directed RNA polymerase subunit L, PHOSPHATE ION
著者Hirata, A, Murakami, K.S.
登録日2014-06-05
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration
Nat Commun, 5, 2014
6HOL
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Structure of ATG14 LIR motif bound to GABARAPL1
分子名称: Beclin 1-associated autophagy-related key regulator, GLYCEROL, Gamma-aminobutyric acid receptor-associated protein-like 1, ...
著者Mouilleron, S, Birgisdottir, A.B, Bhujbal, Z, Wirth, M, Sjottem, E, Evjen, G, Zhang, W, Lee, R, O'Reilly, N, Tooze, S, Lamark, T, Johansen, T.
登録日2018-09-17
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs.
Autophagy, 15, 2019
4XF5
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BU of 4xf5 by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol.
分子名称: (2S)-2-aminopropan-1-ol, CHLORIDE ION, Twin-arginine translocation pathway signal
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-26
公開日2015-01-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol.
To be published
6HOV
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BU of 6hov by Molmil
Crystal Structure of BRD4 first bromodomain in complex with ferulic acid
分子名称: 1,2-ETHANEDIOL, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, Bromodomain-containing protein 4
著者Dalle Vedove, A, Lolli, G.
登録日2018-09-18
公開日2019-10-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biochemical and cellular mechanism of protein kinase CK2 inhibition by deceptive curcumin.
Febs J., 287, 2020
6HGD
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BU of 6hgd by Molmil
Crystal structure of Alpha1-antichymotrypsin variant NewBG-0: a new binding globulin variant that is devoid of any cortisol-binding capabilities
分子名称: Alpha-1-antichymotrypsin
著者Gardill, B.R, Schmidt, K, Muller, Y.A.
登録日2018-08-23
公開日2019-05-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献NewBG: A surrogate corticosteroid-binding globulin with an unprecedentedly high ligand release efficacy.
J.Struct.Biol., 207, 2019
6HPJ
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BU of 6hpj by Molmil
Structure of human SRSF1 RRM1 bound to AACAAA RNA
分子名称: Immunoglobulin G-binding protein G,Serine/arginine-rich splicing factor 1, RNA (5'-R(*AP*AP*CP*AP*AP*A)-3')
著者Allain, F.T.H, Clery, A.
登録日2018-09-21
公開日2020-11-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing.
Nat Commun, 12, 2021
6HGY
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BU of 6hgy by Molmil
CRYSTAL STRUCTURE OF CATHEPSIN K WITH N-DESMETHYL THALASSOSPIRAMIDE C
分子名称: Cathepsin K, THALASSOSPIRAMIDE C
著者Zakarian, A, Buckman, B.O, Adler, M, Griessner, A, Blaesse, M.
登録日2018-08-23
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Total Synthesis of Covalent Cysteine Protease Inhibitor N-Desmethyl Thalassospiramide C and Crystallographic Evidence for Its Mode of Action.
Org.Lett., 21, 2019
8PZK
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BU of 8pzk by Molmil
Crystal structure of the Orange Carotenoid Protein 2 (OCP2) from Gloeocapsa sp. PCC 7428
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, GLYCEROL, ...
著者Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Maksimov, E.G, Popov, V.O, Sluchanko, N.N.
登録日2023-07-27
公開日2024-01-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families.
Int.J.Biol.Macromol., 254, 2024
5J7C
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BU of 5j7c by Molmil
A picomolar affinity FN3 domain in complex with hen egg-white lysozyme
分子名称: FNfn10-anti-lysozyme (DE0.4.1), Lysozyme C
著者Porebski, B.T, Drinkwater, N, McGowan, S, Buckle, A.M.
登録日2016-04-06
公開日2016-08-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.535 Å)
主引用文献Circumventing the stability-function trade-off in an engineered FN3 domain.
Protein Eng.Des.Sel., 2016
6HQ8
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BU of 6hq8 by Molmil
Bacterial beta-1,3-oligosaccharide phosphorylase from GH149 with laminarihexaose bound at a surface site
分子名称: 1,2-ETHANEDIOL, BICINE, Beta-1,3-oligosaccharide phosphorylase, ...
著者Kuhaudomlarp, S, Stevenson, C.E.M, Lawson, D.M, Field, R.A.
登録日2018-09-24
公開日2019-06-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structure of a GH149 beta-(1 → 3) glucan phosphorylase reveals a new surface oligosaccharide binding site and additional domains that are absent in the disaccharide-specific GH94 glucose-beta-(1 → 3)-glucose (laminaribiose) phosphorylase.
Proteins, 87, 2019
6DEV
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BU of 6dev by Molmil
Human caspase-6 E35K
分子名称: Caspase-6
著者Tubeleviciute-Aydin, A, Beautrait, A, Lynham, J, Sharma, G, Gorelik, A, Deny, L.J, Soya, N, Lukacs, G.L, Nagar, B, Marinier, A, LeBlanc, A.C.
登録日2018-05-13
公開日2019-03-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.348 Å)
主引用文献Identification of Allosteric Inhibitors against Active Caspase-6.
Sci Rep, 9, 2019
7LA4
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BU of 7la4 by Molmil
Integrin AlphaIIbBeta3-PT25-2 Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Bush, M.W, Walz, T, Coller, B, Filizola, M, Spasic, A, Nesic, D, Li, J.
登録日2021-01-05
公開日2022-01-12
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Electron microscopy shows that binding of monoclonal antibody PT25-2 primes integrin alpha IIb beta 3 for ligand binding.
Blood Adv, 5, 2021
6HRK
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Structure of a far-red fluorescent biliprotein derived from a far-red induced allophycocyanin F subunit from a thermophilic cyanobacterium Chroococcidiopsis thermalis
分子名称: Allophycocyanin beta-18 subunit apoprotein, BILIVERDINE IX ALPHA
著者Hou, Y.-N, Hoeppner, A, Ding, W.-L, Gaertner, W, Zhao, K.-H.
登録日2018-09-27
公開日2019-10-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Control of a far-red/near-infrared spectral switch in an artificial fluorescent biliprotein derived from allophycocyanin
Protein Sci., Suppl.: Diskette Appendix To V. , No. , [Month], Filename:, 31, 2022
5IU2
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Discovery of imidazoquinolines as a novel class of potent, selective and in vivo efficacious COT kinase inhibitors
分子名称: Mitogen-activated protein kinase kinase kinase 8, N-[2-(morpholin-4-yl)ethyl]-6-(8-phenyl-1H-imidazo[4,5-c][1,7]naphthyridin-1-yl)-1,3-benzothiazol-2-amine
著者Gutmann, S, Hinniger, A.
登録日2016-03-17
公開日2016-08-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of Imidazoquinolines as a Novel Class of Potent, Selective, and in Vivo Efficacious Cancer Osaka Thyroid (COT) Kinase Inhibitors.
J.Med.Chem., 59, 2016
4XN8
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Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
分子名称: ALANINE, Aminopeptidase N, MALONATE ION, ...
著者Addlagatta, A, Gumpena, R.
登録日2015-01-15
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
To Be Published
6HNN
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Crystal structure of wild-type IdmH, a putative polyketide cyclase from Streptomyces antibioticus
分子名称: Putative polyketide cyclase IdmH
著者Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
登録日2018-09-16
公開日2019-11-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
5J94
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Human cathepsin K mutant C25S in complex with the allosteric effector NSC13345
分子名称: 2-{[(carbamoylsulfanyl)acetyl]amino}benzoic acid, Cathepsin K, SULFATE ION
著者Novinec, M, Korenc, M, Lenarcic, B, Baici, A.
登録日2016-04-08
公開日2016-04-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.22002459 Å)
主引用文献A novel allosteric mechanism in the cysteine peptidase cathepsin K discovered by computational methods.
Nat Commun, 5, 2014

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件を2024-09-11に公開中

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