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7NGA
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BU of 7nga by Molmil
CryoEM structure of the MDA5-dsRNA filament in complex with ADP with 88-degree helical twist
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*AP*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*G)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-08
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7NIQ
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BU of 7niq by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ADP-AlF4(Major class)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*AP*UP*CP*UP*CP*CP*UP*CP*GP*GP*CP*UP*UP*G)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-13
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7NIC
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BU of 7nic by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ADP-AlF4(minor class)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*GP*UP*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*A)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-11
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7OJI
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BU of 7oji by Molmil
ABCG2 topotecan turnover-2 state
分子名称: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Yu, Q, Ni, D, Kowal, J, Manolaridis, I, Jackson, S.M, Stahlberg, H, Locher, K.P.
登録日2021-05-16
公開日2021-07-21
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.
Nat Commun, 12, 2021
7OJH
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BU of 7ojh by Molmil
ABCG2 topotecan turnover-1 state
分子名称: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Yu, Q, Ni, D, Kowal, J, Manolaridis, I, Jackson, S.M, Stahlberg, H, Locher, K.P.
登録日2021-05-15
公開日2021-07-21
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.
Nat Commun, 12, 2021
6G1X
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BU of 6g1x by Molmil
CryoEM structure of the MDA5-dsRNA filament with 91-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-22
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6G1S
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BU of 6g1s by Molmil
CryoEM structure of the MDA5-dsRNA filament with 87-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-21
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6G19
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BU of 6g19 by Molmil
CryoEM structure of the MDA5-dsRNA filament with 74-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-20
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6GKM
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BU of 6gkm by Molmil
CryoEM structure of the MDA5-dsRNA filament in complex with ATP (10 mM)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-05-21
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6H61
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BU of 6h61 by Molmil
CryoEM structure of the MDA5-dsRNA filament with 89 degree twist and without nucleotide
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-07-25
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6GJZ
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BU of 6gjz by Molmil
CryoEM structure of the MDA5-dsRNA filament in complex with AMPPNP
分子名称: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-05-17
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6GKH
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BU of 6gkh by Molmil
CryoEM structure of the MDA5-dsRNA filament in complex with ADP-AlF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-05-21
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6H66
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BU of 6h66 by Molmil
CryoEM structure of the MDA5-dsRNA filament with 93 degree twist and without nucleotide
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-07-26
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (4.16 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
4JVS
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BU of 4jvs by Molmil
Crystal structure of LepB GAP domain from Legionella drancourtii in complex with Rab1-GDP and AlF3
分子名称: ACETIC ACID, ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, ...
著者Yu, Q, Yao, Q, Wang, D.-C, Shao, F.
登録日2013-03-26
公開日2013-05-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.783 Å)
主引用文献Structural analyses of Legionella LepB reveal a new GAP fold that catalytically mimics eukaryotic RasGAP
Cell Res., 23, 2013
5JHE
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BU of 5jhe by Molmil
The Crystal Structure of the Saccharomyces cerevisiae Co-Chaperone Cpr7
分子名称: Peptidyl-prolyl cis-trans isomerase CYP7
著者Yu, Q, Xu, L.
登録日2016-04-20
公開日2017-04-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of the Saccharomyces cerevisiae Co-Chaperone Cpr7
To Be Published
7BKQ
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BU of 7bkq by Molmil
CryoEM structure of MDA5-dsRNA filament in complex with ADP with 92-degree helical twist
分子名称: ADENOSINE-5'-DIPHOSPHATE, Isoform 2 of Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-01-17
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7OJ8
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BU of 7oj8 by Molmil
ABCG2 E1S turnover-2 state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, CHOLESTEROL, ...
著者Ni, D, Yu, Q, Kowal, J, Manolaridis, I, Jackson, S.M, Stahlberg, H, Locher, K.P.
登録日2021-05-14
公開日2021-07-21
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.
Nat Commun, 12, 2021
6DRF
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BU of 6drf by Molmil
Structure of human Retinal Degeneration 3(RD3) Protein
分子名称: Protein RD3
著者Yu, Q, Lim, S, Peshenko, I, Cudia, D, Dizhoor, A.M, Ames, J.B.
登録日2018-06-11
公開日2019-02-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Retinal degeneration 3 (RD3) protein, a retinal guanylyl cyclase regulator, forms a monomeric and elongated four-helix bundle.
J. Biol. Chem., 294, 2019
3R2W
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BU of 3r2w by Molmil
Crystal Structure of UDP-glucose Pyrophosphorylase of Homo Sapiens
分子名称: UTP--glucose-1-phosphate uridylyltransferase
著者Zheng, X, Yu, Q.
登録日2011-03-14
公開日2012-02-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The crystal structure of human UDP-glucose pyrophosphorylase reveals a latch effect that influences enzymatic activity.
Biochem.J., 442, 2012
8BI0
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BU of 8bi0 by Molmil
ABCG2 turnover-2 state with tariquidar bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, CHOLESTEROL, ...
著者Yu, Q, Kowal, J, Tajkhorshid, E, Locher, K.P.
登録日2022-11-01
公開日2023-01-11
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Differential dynamics and direct interaction of bound ligands with lipids in multidrug transporter ABCG2.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BHT
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BU of 8bht by Molmil
ABCG2 turnover-1 state with tariquidar bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, CHOLESTEROL, ...
著者Yu, Q, Kowal, J, Tajkhorshid, E, Locher, K.P.
登録日2022-10-31
公開日2023-01-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Differential dynamics and direct interaction of bound ligands with lipids in multidrug transporter ABCG2.
Proc.Natl.Acad.Sci.USA, 120, 2023
7KL5
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BU of 7kl5 by Molmil
Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-1, ...
著者Fisher, A.J, Ames, J.B, Yu, Q.
登録日2020-10-29
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Crystal Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues Phe4246-Val4271 Reveals a Fifth Calcium Binding Site.
Biochemistry, 60, 2021
6BHN
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BU of 6bhn by Molmil
Red Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Yu, Q, Lim, S, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7BKP
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BU of 7bkp by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
著者Singh, R, Herrero del Valle, A, Yu, Q, Modis, Y.
登録日2021-01-16
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
4UUQ
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BU of 4uuq by Molmil
Crystal structure of human mono-glyceride lipase in complex with SAR127303
分子名称: 4-({[(4-chlorophenyl)sulfonyl]amino}methyl)piperidine-1-carboxylic acid, MONOGLYCERIDE LIPASE
著者Griebel, G, Pichat, P, Beeske, S, Leroy, T, Redon, N, Francon, D, Bert, L, Even, L, Lopez-Grancha, M, Tolstykh, T, Sun, F, Yu, Q, Brittain, S, Arlt, H, He, T, Zhang, B, Wiederschain, D, Bertrand, T, Houtman, J, Rak, A, Vallee, F, Michot, N, Auge, F, Menet, V, Bergis, O.E, George, P, Avenet, P, Mikol, V, Didier, M, Escoubet, J.
登録日2014-07-30
公開日2015-01-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Selective Blockade of the Hydrolysis of the Endocannabinoid 2-Arachidonoylglycerol Impairs Learning and Memory Performance While Producing Antinociceptive Activity in Rodents.
Sci.Rep., 5, 2015

 

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