Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7CMZ
DownloadVisualize
BU of 7cmz by Molmil
Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8
分子名称: DNA topoisomerase 2-binding protein 1, Histone lysine demethylase PHF8, POTASSIUM ION, ...
著者Che, S.Y, Ma, S, Cao, C, Yao, Z, Shi, L, Yang, N.
登録日2020-07-29
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献PHF8-promoted TOPBP1 demethylation drives ATR activation and preserves genome stability.
Sci Adv, 7, 2021
8G3C
DownloadVisualize
BU of 8g3c by Molmil
Crystal structure of human WDR5 in complex with N-[(2'-cyano[1,1'-biphenyl]-4-yl)methyl]-3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxamide (compound 1, WDR5-MYC PPI inhibitor)
分子名称: N-[(2'-cyano[1,1'-biphenyl]-4-yl)methyl]-3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxamide, WD repeat-containing protein 5
著者Zhao, M.
登録日2023-02-07
公開日2023-06-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and Structure-Based Design of Inhibitors of the WD Repeat-Containing Protein 5 (WDR5)-MYC Interaction.
J.Med.Chem., 66, 2023
8GVJ
DownloadVisualize
BU of 8gvj by Molmil
Crystal structure of cMET kinase domain bound by D6808
分子名称: (1^4Z,5^2E)-6^3-(trifluoromethyl)-5^1,5^6-dihydro-1^1H-8-aza-2(3,6)-quinolina-5(1,3)-pyridazina-1(4,1)-pyrazola-6(1,4)-benzenacyclododecaphane-5^6,7-dione, Hepatocyte growth factor receptor
著者Chen, Y.H, Qu, L.Z.
登録日2022-09-15
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Discovery of D6808, a Highly Selective and Potent Macrocyclic c-Met Inhibitor for Gastric Cancer Harboring MET Gene Alteration Treatment.
J.Med.Chem., 65, 2022
8H3Z
DownloadVisualize
BU of 8h3z by Molmil
Crystal structure of the effector-binding domain of the LysR-type trasncription factor NtcB from Anabaena PCC 7120
分子名称: IODIDE ION, NtcB
著者Han, S.J, Jiang, Y.L, Zhou, C.Z.
登録日2022-10-09
公開日2023-10-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献DNA looping mediates cooperative transcription activation.
Nat.Struct.Mol.Biol., 31, 2024
8H89
DownloadVisualize
BU of 8h89 by Molmil
Capsid of Ralstonia phage GP4
分子名称: Major capsid protein, Virion associated protein
著者Liu, H.R, Chen, W.Y.
登録日2022-10-22
公開日2022-11-16
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9.
Viruses, 14, 2022
8I1T
DownloadVisualize
BU of 8i1t by Molmil
The asymmetric unit of P22 empty capsid
分子名称: Major capsid protein
著者Xiao, H, Liu, H.R, Cheng, L.P.
登録日2023-01-13
公開日2023-03-08
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Assembly and Capsid Expansion Mechanism of Bacteriophage P22 Revealed by High-Resolution Cryo-EM Structures.
Viruses, 15, 2023
8I1V
DownloadVisualize
BU of 8i1v by Molmil
The asymmetric unit of P22 procapsid
分子名称: Major capsid protein, Scaffolding protein
著者Xiao, H, Liu, H.R, Cheng, L.P.
登録日2023-01-13
公開日2023-03-08
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Assembly and Capsid Expansion Mechanism of Bacteriophage P22 Revealed by High-Resolution Cryo-EM Structures.
Viruses, 15, 2023
1J4V
DownloadVisualize
BU of 1j4v by Molmil
CYANOVIRIN-N
分子名称: CYANOVIRIN-N
著者Clore, G.M, Bewley, C.A.
登録日2001-11-21
公開日2002-03-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Using conjoined rigid body/torsion angle simulated annealing to determine the relative orientation of covalently linked protein domains from dipolar couplings.
J.Magn.Reson., 154, 2002
5WYH
DownloadVisualize
BU of 5wyh by Molmil
Crystal structure of RidL(1-200) complexed with VPS29
分子名称: GLYCEROL, Interaptin, Vacuolar protein sorting-associated protein 29
著者Yao, J, Sun, Q, Jia, D.
登録日2017-01-13
公開日2018-01-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Mechanism of inhibition of retromer transport by the bacterial effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5WY2
DownloadVisualize
BU of 5wy2 by Molmil
Human Snx5 PX domain in complex with Chlamydia IncE C terminus
分子名称: IncE, Sorting nexin-5
著者Sun, Q, Yong, X, Jia, D.
登録日2017-01-10
公開日2017-11-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and functional insights into sorting nexin 5/6 interaction with bacterial effector IncE.
Signal Transduct Target Ther, 2, 2017
5XA6
DownloadVisualize
BU of 5xa6 by Molmil
Ion channel modulation by scorpion haemolymph and its defensin ingredients uncovers origin of neurotoxins in telson formed in Paleozoic scorpion
分子名称: BmKDfsin3
著者Tian, C, Wu, Y, Meng, L, Qu, D.
登録日2017-03-11
公開日2018-03-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ion channel modulation by scorpion haemolymph and its defensin ingredients uncovers origin of neurotoxins in telson formed in Paleozoic scorpion
To Be Published
6AFR
DownloadVisualize
BU of 6afr by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with 5-((4-fluoro-1H-imidazol-1-yl)methyl)quinolin-8-ol
分子名称: 5-[(4-fluoranylimidazol-1-yl)methyl]quinolin-8-ol, Bromodomain-containing protein 4
著者Xing, J, Zhang, R.K, Zheng, M.Y, Luo, C, Jiang, X.R.
登録日2018-08-08
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Rational design of 5-((1H-imidazol-1-yl)methyl)quinolin-8-ol derivatives as novel bromodomain-containing protein 4 inhibitors
Eur J Med Chem, 163, 2018
7EQ1
DownloadVisualize
BU of 7eq1 by Molmil
GPR114-Gs-scFv16 complex
分子名称: Adhesion G-protein coupled receptor G5, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Ping, Y.
登録日2021-04-28
公開日2022-05-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for the tethered peptide activation of adhesion GPCRs.
Nature, 604, 2022
7E44
DownloadVisualize
BU of 7e44 by Molmil
Crystal structure of NudC complexed with dpCoA
分子名称: DEPHOSPHO COENZYME A, NADH pyrophosphatase, ZINC ION
著者Zhou, W, Guan, Z.Y, Yin, P, Zhang, D.L.
登録日2021-02-10
公開日2021-07-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into dpCoA-RNA decapping by NudC.
Rna Biol., 18, 2021
7FDV
DownloadVisualize
BU of 7fdv by Molmil
Cryo-EM structure of the human cholesterol transporter ABCG1 in complex with cholesterol
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family G member 1, CHOLESTEROL, ...
著者Xu, D, Li, Y.Y, Yang, F.R, Sun, C.R, Pan, J.H, Wang, L, Chen, Z.P, Fang, S.C, Yao, X.B, Hou, W.T, Zhou, C.Z, Chen, Y.
登録日2021-07-18
公開日2022-06-22
最終更新日2022-06-29
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structure and transport mechanism of the human cholesterol transporter ABCG1.
Cell Rep, 38, 2022
7VD2
DownloadVisualize
BU of 7vd2 by Molmil
Human TOM complex without cross-linking
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Mitochondrial import receptor subunit TOM22 homolog, Mitochondrial import receptor subunit TOM40 homolog, ...
著者Liu, D.S, Sui, S.F.
登録日2021-09-06
公開日2022-07-13
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structural basis of Tom20 and Tom22 cytosolic domains as the human TOM complex receptors.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VDD
DownloadVisualize
BU of 7vdd by Molmil
Human TOM complex with cross-linking
分子名称: Mitochondrial import receptor subunit TOM22 homolog, Mitochondrial import receptor subunit TOM40 homolog, Mitochondrial import receptor subunit TOM5 homolog, ...
著者Liu, D.S, Sui, S.F.
登録日2021-09-06
公開日2022-07-13
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structural basis of Tom20 and Tom22 cytosolic domains as the human TOM complex receptors.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VJT
DownloadVisualize
BU of 7vjt by Molmil
Crystal Structure of Mtb Pks13-TE in complex with inhibitor coumestan derivative 8
分子名称: 3,8-bis(oxidanyl)-7-(piperidin-1-ylmethyl)-[1]benzofuro[3,2-c]chromen-6-one, Polyketide synthase Pks13 (Termination polyketide synthase)
著者Zhang, W, Wang, S.S, Yu, L.F.
登録日2021-09-28
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure-Based Optimization of Coumestan Derivatives as Polyketide Synthase 13-Thioesterase(Pks13-TE) Inhibitors with Improved hERG Profiles for Mycobacterium tuberculosis Treatment.
J.Med.Chem., 65, 2022
7VPX
DownloadVisualize
BU of 7vpx by Molmil
The cryo-EM structure of the human pre-A complex
分子名称: 5SS, DnaJ homolog subfamily C member 8, PHD finger-like domain-containing protein 5A, ...
著者Zhang, X, Zhan, X, Shi, Y.
登録日2021-10-18
公開日2023-05-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into branch site proofreading by human spliceosome.
Nat.Struct.Mol.Biol., 2024
7WCX
DownloadVisualize
BU of 7wcx by Molmil
Crystal structure of FGFR4(V550M) kinase domain with 7v
分子名称: Fibroblast growth factor receptor 4, SULFATE ION, ~{N}-[2-[[5-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-1~{H}-indazol-3-yl]amino]-3-fluoranyl-5-(4-morpholin-4-ylpiperidin-1-yl)phenyl]propanamide
著者Chen, X.J, Lin, Q.M, Dai, S.Y, Chen, Y.H.
登録日2021-12-20
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.175 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Aminoindazole Derivatives as Highly Selective Covalent Inhibitors of Wild-Type and Gatekeeper Mutant FGFR4.
J.Med.Chem., 65, 2022
7WCT
DownloadVisualize
BU of 7wct by Molmil
Crystal structure of FGFR4 kinase domain with 7v
分子名称: Fibroblast growth factor receptor 4, GLYCEROL, SULFATE ION, ...
著者Chen, X.J, Lin, Q.M, Dai, S.Y, Chen, Y.H.
登録日2021-12-20
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.106 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Aminoindazole Derivatives as Highly Selective Covalent Inhibitors of Wild-Type and Gatekeeper Mutant FGFR4.
J.Med.Chem., 65, 2022
7WCW
DownloadVisualize
BU of 7wcw by Molmil
Crystal structure of FGFR4(V550L) kinase domain with 7v
分子名称: Fibroblast growth factor receptor 4, SULFATE ION, ~{N}-[2-[[5-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-1~{H}-indazol-3-yl]amino]-3-fluoranyl-5-(4-morpholin-4-ylpiperidin-1-yl)phenyl]propanamide
著者Chen, X.J, Lin, Q.M, Dai, S.Y, Chen, Y.H.
登録日2021-12-20
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.317 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Aminoindazole Derivatives as Highly Selective Covalent Inhibitors of Wild-Type and Gatekeeper Mutant FGFR4.
J.Med.Chem., 65, 2022
7Y4T
DownloadVisualize
BU of 7y4t by Molmil
Crystal structure of cMET kinase domain bound by compound 9I
分子名称: 2-[2-[3-(1-methylpyrazol-4-yl)quinolin-6-yl]ethyl]-6-(3-nitrophenyl)pyridazin-3-one, Hepatocyte growth factor receptor
著者Qu, L.Z, Chen, Y.H.
登録日2022-06-16
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Discovery of D6808, a Highly Selective and Potent Macrocyclic c-Met Inhibitor for Gastric Cancer Harboring MET Gene Alteration Treatment.
J.Med.Chem., 65, 2022
7Y4U
DownloadVisualize
BU of 7y4u by Molmil
Crystal structure of cMET kinase domain bound by compound 9Y
分子名称: Hepatocyte growth factor receptor, ~{N}-methyl-4-[1-[2-[3-(1-methylpyrazol-4-yl)quinolin-6-yl]ethyl]-6-oxidanylidene-pyridazin-3-yl]-2-(trifluoromethyl)benzamide
著者Qu, L.Z, Chen, Y.H.
登録日2022-06-16
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Discovery of D6808, a Highly Selective and Potent Macrocyclic c-Met Inhibitor for Gastric Cancer Harboring MET Gene Alteration Treatment.
J.Med.Chem., 65, 2022
7CM3
DownloadVisualize
BU of 7cm3 by Molmil
Cryo-EM structure of human NALCN in complex with FAM155A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wu, J, Yan, Z, Ke, M.
登録日2020-07-24
公開日2020-11-11
最終更新日2020-12-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the human sodium leak channel NALCN in complex with FAM155A.
Nat Commun, 11, 2020

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon