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6L96
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BU of 6l96 by Molmil
Structure of PPARalpha-LBD/pemafibrate/SRC1 peptide
Descriptor: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, Peroxisome proliferator-activated receptor alpha, SRC1 coactivator peptide
Authors:Kawasaki, M, Kambe, A, Yamamoto, Y, Arulmozhira, S, Ito, S, Nakagawa, Y, Tokiwa, H, Nakano, S, Shimano, H.
Deposit date:2019-11-08
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Elucidation of Molecular Mechanism of a Selective PPAR alpha Modulator, Pemafibrate, through Combinational Approaches of X-ray Crystallography, Thermodynamic Analysis, and First-Principle Calculations.
Int J Mol Sci, 21, 2020
7W9Q
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BU of 7w9q by Molmil
Crystal structure of V30M-TTR in complex with naringenin derivative-14
Descriptor: (2~{R})-2-(3-chloranyl-4-oxidanyl-phenyl)-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, CALCIUM ION, Transthyretin
Authors:Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-12-10
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
7W9R
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BU of 7w9r by Molmil
Crystal structure of V30M-TTR in complex with naringenin derivative-18
Descriptor: (2~{R})-2-[3,5-bis(chloranyl)-4-oxidanyl-phenyl]-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, Transthyretin
Authors:Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-12-10
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
8WGT
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BU of 8wgt by Molmil
Crystal structure of V30M-TTR in complex with compound 7
Descriptor: Transthyretin, [4,7-bis(chloranyl)-2-ethyl-1-benzofuran-3-yl]-[3,5-bis(iodanyl)-4-oxidanyl-phenyl]methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGS
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BU of 8wgs by Molmil
Crystal structure of V30M-TTR in complex with compound 4
Descriptor: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-4-iodanyl-1-benzofuran-3-yl)methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGU
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BU of 8wgu by Molmil
Crystal structure of V30M-TTR in complex with compound 20
Descriptor: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-[2-ethyl-4,7-bis(fluoranyl)-1-benzofuran-3-yl]methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.508 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
6LIV
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BU of 6liv by Molmil
Crystal structure of Tyrosine decarboxylase in complex with PLP
Descriptor: GLYCEROL, Tyrosine/DOPA decarboxylase 2
Authors:Wang, H, Yu, J, Yao, M.
Deposit date:2019-12-13
Release date:2020-02-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structures clarify cofactor binding of plant tyrosine decarboxylase.
Biochem.Biophys.Res.Commun., 2019
7BJV
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BU of 7bjv by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI09181
Descriptor: DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
Authors:Browning, C, McEwen, A.G, Billas, I.M.L.
Deposit date:2021-01-14
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7BJU
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BU of 7bju by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI08346
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, ...
Authors:Browning, C, McEwen, A.G, Billas, I.M.L.
Deposit date:2021-01-14
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7EJR
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BU of 7ejr by Molmil
Crystal structure of V30M mutated transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
Descriptor: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-04-02
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7EJQ
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BU of 7ejq by Molmil
Crystal structure of human transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
Descriptor: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-04-02
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT3
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BU of 7dt3 by Molmil
Crystal structure of human transthyretin in complex with 4-chloro-9,10-dioxo-9,10-dihydroanthracene-2-carboxylic acid
Descriptor: 4-chloranyl-9,10-bis(oxidanylidene)anthracene-2-carboxylic acid, CALCIUM ION, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-01-04
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT5
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BU of 7dt5 by Molmil
Crystal structure of human transthyretin in complex with 4-chloro-9-oxo-9H-xanthene-2-carboxylic acid
Descriptor: 4-chloranyl-9-oxidanylidene-xanthene-2-carboxylic acid, CALCIUM ION, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-01-04
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT6
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BU of 7dt6 by Molmil
Crystal structure of V30M mutated transthyretin in complex with purpurin
Descriptor: Purpurin, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-01-04
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT8
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BU of 7dt8 by Molmil
Crystal structure of V30M mutated transthyretin in complex with 4-chloro-9-oxo-9H-xanthene-2-carboxylic acid
Descriptor: 4-chloranyl-9-oxidanylidene-xanthene-2-carboxylic acid, CALCIUM ION, Transthyretin
Authors:Kitakami, R, Yokoyama, T, Mizuguchi, M.
Deposit date:2021-01-04
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
2LDS
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BU of 2lds by Molmil
Solution Structure of a Short-chain LaIT1 from the Venom of Scorpion Liocheles australasiae
Descriptor: Insecticidal toxin LaIT1
Authors:Horita, S, Miyakawa, T, Nagata, K, Tanokura, M.
Deposit date:2011-06-01
Release date:2011-09-14
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of a short-chain insecticidal toxin LaIT1 from the venom of scorpion Liocheles australasiae.
Biochem.Biophys.Res.Commun., 411, 2011
6LIU
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BU of 6liu by Molmil
Crystal structure of apo Tyrosine decarboxylase
Descriptor: Tyrosine/DOPA decarboxylase 2
Authors:Yu, J, Wang, H, Yao, M.
Deposit date:2019-12-13
Release date:2020-02-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures clarify cofactor binding of plant tyrosine decarboxylase.
Biochem.Biophys.Res.Commun., 2019
8II1
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BU of 8ii1 by Molmil
Crystal structure of V30M-TTR in complex with BID
Descriptor: Benziodarone, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-02-24
Release date:2023-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II3
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BU of 8ii3 by Molmil
Crystal structure of V30M-TTR in complex with 6-hydroxy BID
Descriptor: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-6-oxidanyl-1-benzofuran-3-yl)methanone
Authors:Yokoyama, T.
Deposit date:2023-02-24
Release date:2023-06-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II2
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BU of 8ii2 by Molmil
Crystal structure of V30M-TTR in complex with BBM
Descriptor: CALCIUM ION, Transthyretin, [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone
Authors:Yokoyama, T.
Deposit date:2023-02-24
Release date:2023-06-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II4
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BU of 8ii4 by Molmil
Crystal structure of V30M-TTR in complex with 6-hydroxy BBM
Descriptor: Transthyretin, [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-6-oxidanyl-1-benzofuran-3-yl)methanone
Authors:Yokoyama, T.
Deposit date:2023-02-24
Release date:2023-06-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8IG1
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BU of 8ig1 by Molmil
Crystal structure of wild-type transthyretin in complex with rafoxanide
Descriptor: SODIUM ION, Transthyretin, ~{N}-[3-chloranyl-4-(4-chloranylphenoxy)phenyl]-3,5-bis(iodanyl)-2-oxidanyl-benzamide
Authors:Yokoyama, T.
Deposit date:2023-02-20
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Rafoxanide, a salicylanilide anthelmintic, interacts with human plasma protein transthyretin.
Febs J., 290, 2023
5YWX
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BU of 5ywx by Molmil
Crystal structure of hematopoietic prostaglandin D synthase in complex with F092
Descriptor: GLUTATHIONE, GLYCEROL, Hematopoietic prostaglandin D synthase, ...
Authors:Kamo, M, Furubayashi, N, Inaka, K, Aritake, K, Omura, A, Tanaka, A.
Deposit date:2017-11-30
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Characterization of crystal water molecules in a high-affinity inhibitor and hematopoietic prostaglandin D synthase complex by interaction energy studies.
Bioorg. Med. Chem., 26, 2018
3UIX
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BU of 3uix by Molmil
Crystal structure of Pim1 kinase in complex with small molecule inhibitor
Descriptor: 2-{4-[(3-aminopropyl)amino]quinazolin-2-yl}phenol, CALCIUM ION, CHLORIDE ION, ...
Authors:Parker, L.J.
Deposit date:2011-11-06
Release date:2012-04-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A novel pim-1 kinase inhibitor targeting residues that bind the substrate Peptide.
J.Mol.Biol., 417, 2012

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