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6EYA
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BU of 6eya by Molmil
Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation
Descriptor: Heat shock protein HSP 90-alpha, ~{N}-(1,3-benzodioxol-5-yl)-~{N}-methyl-3-[(3-methylphenyl)methyl]-6-oxidanyl-1~{H}-indazole-5-carboxamide
Authors:Musil, D, Lehmann, M, Buchstaller, H.-P.
Deposit date:2017-11-11
Release date:2018-05-30
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations.
J Chem Theory Comput, 14, 2018
6EYB
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BU of 6eyb by Molmil
Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation
Descriptor: 3-(phenylmethyl)-5-(2-phenylpyrazol-3-yl)-2~{H}-indazol-6-ol, Heat shock protein HSP 90-alpha, SULFATE ION
Authors:Musil, D, Lehmann, M, Buchstaller, H.-P.
Deposit date:2017-11-11
Release date:2018-05-30
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations.
J Chem Theory Comput, 14, 2018
6F1N
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BU of 6f1n by Molmil
Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation
Descriptor: 4-[5-[2-aminocarbonyl-3,6-bis(azanyl)-5-cyano-thieno[2,3-b]pyridin-4-yl]-2-methoxy-phenoxy]butanoic acid, Heat shock protein HSP 90-alpha, SULFATE ION
Authors:Musil, D, Lehmann, M, Eggenweiler, H.-M.
Deposit date:2017-11-22
Release date:2018-05-30
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations.
J Chem Theory Comput, 14, 2018
6FCJ
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BU of 6fcj by Molmil
Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations
Descriptor: 4-[2-(2-chlorophenyl)pyrazol-3-yl]benzene-1,3-diol, Heat shock protein HSP 90-alpha
Authors:Musil, D, Lehmann, M, Eggenweiler, H.-M.
Deposit date:2017-12-20
Release date:2019-01-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations
Arxiv, 2019
6HHR
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BU of 6hhr by Molmil
Hsp90 in complex with 5-(2,4-Dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazole-3-thione
Descriptor: 3-[2,4-bis(oxidanyl)phenyl]-4-(2-fluorophenyl)-1~{H}-1,2,4-triazole-5-thione, Heat shock protein HSP 90-alpha, SULFATE ION
Authors:Musil, D, Lehman, M, Eggenweiler, H.-M.
Deposit date:2018-08-29
Release date:2019-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Predicting Residence Time and Drug Unbinding Pathway through Scaled Molecular Dynamics.
J.Chem.Inf.Model., 59, 2019
4EFU
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BU of 4efu by Molmil
Hsp90 Alpha N-terminal Domain in Complex with an Inhibitor 6-Hydroxy-3-(3-methyl-benzyl)-1H-indazole-5-carboxylic acid benzyl-methyl-amide
Descriptor: Heat shock protein HSP 90-alpha, N-benzyl-6-hydroxy-N-methyl-3-(3-methylbenzyl)-1H-indazole-5-carboxamide, SULFATE ION
Authors:Musil, D, Lehmann, M, Graedler, U, Buchstaller, H.-P.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-based discovery of hydroxy-indazole-carboxamides as novel small molecule inhibitors of Hsp90
Bioorg.Med.Chem.Lett., 22, 2012
4GU9
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BU of 4gu9 by Molmil
Focal adhesion kinase catalytic domain in complex with (2-Fluoro-phenyl)-(1H-pyrazolo[3,4-d]pyrimidin-4-yl)-amine
Descriptor: Focal adhesion kinase 1, N-(2-fluorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine
Authors:Musil, D.
Deposit date:2012-08-29
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fragment-based discovery of new highly substituted 1H-pyrrolo[2,3-b]- and 3H-imidazolo[4,5-b]-pyridines as focal adhesion kinase inhibitors.
J.Med.Chem., 56, 2013
4GU6
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BU of 4gu6 by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH N-{3-[(5-Cyano-2-phenyl-1H-pyrrolo[2,3-b]pyridin-4-ylamino)- methyl]-pyridin-2-yl}-N-methyl-methanesulfonamide
Descriptor: Focal adhesion kinase 1, N-(3-{[(5-cyano-2-phenyl-1H-pyrrolo[2,3-b]pyridin-4-yl)amino]methyl}pyridin-2-yl)-N-methylmethanesulfonamide
Authors:Musil, D, Heinrich, T.
Deposit date:2012-08-29
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-based discovery of new highly substituted 1H-pyrrolo[2,3-b]- and 3H-imidazolo[4,5-b]-pyridines as focal adhesion kinase inhibitors.
J.Med.Chem., 56, 2013
4IO8
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BU of 4io8 by Molmil
Crystal structure of human HSP70 complexed with 4-{(2R,3S,4R)-5-[(R)-6-Amino-8-(3,4-dichloro-benzylamino)-purin-9-yl]-3,4-dihydroxy-tetrahydro-furan-2-ylmethoxymethyl}-benzonitrile
Descriptor: 4-[[(2R,3S,4R,5R)-5-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-3,4-dihydroxy-oxolan-2-yl]methoxymethyl]benzonitrile, Heat shock 70kDa protein 1A variant
Authors:Musil, D, Scholz, S.
Deposit date:2013-01-07
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Functional analysis of hsp70 inhibitors.
Plos One, 8, 2013
4KAO
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BU of 4kao by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 1-(5-tert-Butyl-2-p-tolyl-2H-pyrazol-3-yl)-3-(4-pyridin-3- yl-phenyl)-urea
Descriptor: 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(pyridin-3-yl)phenyl]urea, Focal adhesion kinase 1, SULFATE ION
Authors:Musil, D, Graedler, U, Heinrich, T, Lehmann, M, Dresing, V.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Fragment-based discovery of focal adhesion kinase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4K9Y
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BU of 4k9y by Molmil
FOCAL ADHESION KINASE Catalytic domain in complex with 1-[4-(6-Amino-purin-9-yl)-phenyl]-3-(5-tert-butyl-2-p-tolyl-2H-pyrazol-3-yl)-urea
Descriptor: 1-[4-(6-amino-9H-purin-9-yl)phenyl]-3-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]urea, Focal adhesion kinase 1
Authors:Musil, D, Graedler, U, Lehmann, M, Heinrich, T, Dresing, V.
Deposit date:2013-04-21
Release date:2013-09-11
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-based discovery of focal adhesion kinase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4KAB
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BU of 4kab by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 3-Methyl-1,4-dihydro-pyrazolo[4,5-c]pyrazole
Descriptor: 3-methyl-1,5-dihydropyrazolo[4,3-c]pyrazole, Focal adhesion kinase 1
Authors:Musil, D, Graedler, U, Heinrich, T, Lehmann, M, Dresing, V.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Fragment-based discovery of focal adhesion kinase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
3GMD
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BU of 3gmd by Molmil
Structure-based design of 7-Azaindole-pyrrolidines as inhibitors of 11beta-Hydroxysteroid-Dehydrogenase type I
Descriptor: 2-methyl-3-{(3S)-1-[(1-pyridin-2-ylcyclopropyl)carbonyl]pyrrolidin-3-yl}-1H-pyrrolo[2,3-b]pyridine, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Valeur, E, Lepifre, F, Roche, D, Christmann-Franck, S, Hillertz, P, Musil, D.
Deposit date:2009-03-13
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure-based design of 7-azaindole-pyrrolidine amides as inhibitors of 11 beta-hydroxysteroid dehydrogenase type I.
Bioorg.Med.Chem.Lett., 22, 2012
7ZJP
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BU of 7zjp by Molmil
Optimization of TEAD P-Site Binding Fragment Hit into In Vivo Active Lead MSC-4106
Descriptor: 2-methyl-4-[4-(trifluoromethyl)phenyl]pyrazolo[3,4-b]indole-7-carboxylic acid, SULFATE ION, Transcriptional enhancer factor TEF-1
Authors:Freire, F, Heinrich, T, Petersson, C, Schneider, R, Garg, S, Schwarz, D, Gunera, J, Seshire, A, Koetzner, L, Schlesiger, S, Musil, D, Schilke, H, Doerfel, B, Diehl, P, Boepple, P, Lemos, A.R, Sousa, P.M.F, Freire, F, Bandeiras, T.M, Carswell, E, Pearson, N, Sirohi, S, Hooker, M, Trivier, E, Broome, R, Balsiger, A, Crowden, A, Dillon, C, Wienke, D.
Deposit date:2022-04-11
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Optimization of TEAD P-Site Binding Fragment Hit into In Vivo Active Lead MSC-4106 .
J.Med.Chem., 65, 2022
7ZJF
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BU of 7zjf by Molmil
R399E, a mutated form of GDF5, for disease modification of osteoarthritis
Descriptor: Growth/differentiation factor 5
Authors:Gigout, A, Wekmann, D, Menges, S, Brenneis, C, Henson, F, Cowan, K.J, Musil, D, Thudium, C, Guehring, H, Michaelis, M, Kleinschmidt-Doerr, K.
Deposit date:2022-04-10
Release date:2022-09-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:R399E, A Mutated Form of Growth and Differentiation Factor 5, for Disease Modification of Osteoarthritis.
Arthritis Rheumatol, 75, 2023
1CEW
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BU of 1cew by Molmil
THE 2.0 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF CHICKEN EGG WHITE CYSTATIN AND ITS POSSIBLE MODE OF INTERACTION WITH CYSTEINE PROTEINASES
Descriptor: CYSTATIN
Authors:Bode, W, Musil, D, Huber, R.
Deposit date:1993-04-21
Release date:1994-01-31
Last modified:2011-09-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 A X-ray crystal structure of chicken egg white cystatin and its possible mode of interaction with cysteine proteinases.
EMBO J., 7, 1988
3PXK
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BU of 3pxk by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH Pyrrolo[2,3-d]thiazole
Descriptor: 6-(4,4-dimethylpent-2-ynyl)-4~{H}-pyrrolo[2,3-d][1,3]thiazole, PTK2 protein, SULFATE ION
Authors:Koolman, H, Heinrich, T, Musil, D.
Deposit date:2010-12-10
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Co-crystal Structures of FAK with an Unprecedented Pyrrolo[2,3-d]thiazole
To be Published
4X2K
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BU of 4x2k by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 4-[(3-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one, SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2014-12-24
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X3J
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BU of 4x3j by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 1-[4-(4-amino-5-oxopyrido[2,3-d]pyrimidin-8(5H)-yl)phenyl]-3-[2-fluoro-5-(trifluoromethyl)phenyl]urea, Angiopoietin-1 receptor
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-30
Release date:2014-12-24
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X2F
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BU of 4x2f by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 4-amino-8-(4-aminophenyl)pyrido[2,3-d]pyrimidin-5(8H)-one, SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2015-10-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X2N
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BU of 4x2n by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2014-12-24
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X2J
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BU of 4x2j by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 4-[(3-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(8H)-one, SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2014-12-24
Last modified:2015-01-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X2G
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BU of 4x2g by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-[(4-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one, SULFATE ION, ...
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-26
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X0M
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BU of 4x0m by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
Descriptor: 4-aminopyrido[2,3-d]pyrimidin-5(8H)-one, SULFATE ION, TGF-beta receptor type-1
Authors:Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
Deposit date:2014-11-21
Release date:2014-12-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
5OD7
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BU of 5od7 by Molmil
Hsp90 inhibitor desolvation as a rationale to steer on-rates and impact residence time
Descriptor: Heat shock protein HSP 90-alpha, [2-azanyl-6-[2-(4-methylpiperazin-1-yl)sulfonylphenyl]quinazolin-4-yl]-(1,3-dihydroisoindol-2-yl)methanone
Authors:Schuetz, D.A, Richter, L, Amaral, M, Grandits, M, Musil, D, Graedler, U, Buchstaller, H.-P, Eggenweiler, H.-M, Frech, M, Ecker, G.F, Lehmann, M.
Deposit date:2017-07-04
Release date:2018-11-21
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand Desolvation Steers On-Rate and Impacts Drug Residence Time of Heat Shock Protein 90 (Hsp90) Inhibitors.
J.Med.Chem., 61, 2018

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