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3QG5
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BU of 3qg5 by Molmil
The Mre11:Rad50 complex forms an ATP dependent molecular clamp in DNA double-strand break repair
Descriptor: GLYCEROL, Mre11, rad50
Authors:Lammens, K.
Deposit date:2011-01-24
Release date:2011-04-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The Mre11:Rad50 Structure Shows an ATP-Dependent Molecular Clamp in DNA Double-Strand Break Repair.
Cell(Cambridge,Mass.), 145, 2011
8S86
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BU of 8s86 by Molmil
human PLD3 homodimer structure
Descriptor: 5'-3' exonuclease PLD3
Authors:Lammens, K.
Deposit date:2024-03-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Lysosomal endonuclease RNase T2 and PLD exonucleases cooperatively generate RNA ligands for TLR7 activation.
Immunity, 2024
7PPJ
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BU of 7ppj by Molmil
human SLFN5
Descriptor: Schlafen family member 5, ZINC ION
Authors:Lammens, K, Metzner, F.J.
Deposit date:2021-09-14
Release date:2022-01-26
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural and biochemical characterization of human Schlafen 5.
Nucleic Acids Res., 50, 2022
7ZQY
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BU of 7zqy by Molmil
Chaetomium thermophilum Rad50 Zn hook
Descriptor: DH domain-containing protein, ZINC ION
Authors:Lammens, K, Rotheneder, M, Stakyte, K.
Deposit date:2022-05-03
Release date:2022-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Cryo-EM structure of the Mre11-Rad50-Nbs1 complex reveals the molecular mechanism of scaffolding functions.
Mol.Cell, 83, 2023
3QF7
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BU of 3qf7 by Molmil
The Mre11:Rad50 complex forms an ATP dependent molecular clamp in DNA double-strand break repair
Descriptor: MAGNESIUM ION, Mre11, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Moeckel, C, Lammens, K.
Deposit date:2011-01-21
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Mre11:Rad50 Structure Shows an ATP-Dependent Molecular Clamp in DNA Double-Strand Break Repair.
Cell(Cambridge,Mass.), 145, 2011
2QFD
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BU of 2qfd by Molmil
Crystal structure of the regulatory domain of human RIG-I with bound Hg
Descriptor: MERCURY (II) ION, Probable ATP-dependent RNA helicase DDX58
Authors:Cui, S, Lammens, A, Lammens, K, Hopfner, K.P.
Deposit date:2007-06-27
Release date:2008-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The C-Terminal Regulatory Domain Is the RNA 5'-Triphosphate Sensor of RIG-I.
Mol.Cell, 29, 2008
2QFB
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BU of 2qfb by Molmil
Crystal structure of the regulatory domain of human RIG-I with bound Zn
Descriptor: Probable ATP-dependent RNA helicase DDX58, ZINC ION
Authors:Cui, S, Lammens, A, Lammens, K, Hopfner, K.P.
Deposit date:2007-06-27
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The C-Terminal Regulatory Domain Is the RNA 5'-Triphosphate Sensor of RIG-I.
Mol.Cell, 29, 2008
4W9M
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BU of 4w9m by Molmil
AMPPNP bound Rad50 in complex with dsDNA
Descriptor: DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*CP*AP*CP*CP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*GP*AP*CP*CP*GP*AP*CP*C)-3'), Exonuclease, ...
Authors:Rojowska, A, Lammens, K.
Deposit date:2014-08-27
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Rad50 DNA double-strand break repair protein in complex with DNA.
Embo J., 33, 2014
4YKE
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BU of 4yke by Molmil
Crystal structure of eukaryotic Mre11 catalytic domain from Chaetomium thermophilum
Descriptor: MANGANESE (II) ION, Mre11
Authors:Seifert, F.U, Lammens, K, Hopfner, K.-P.
Deposit date:2015-03-04
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:Structure of the catalytic domain of Mre11 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
7Q3Z
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BU of 7q3z by Molmil
DNA/RNA binding protein
Descriptor: SODIUM ION, Schlafen family member 5, ZINC ION
Authors:Huber, E, Lammens, K.
Deposit date:2021-10-29
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical characterization of human Schlafen 5.
Nucleic Acids Res., 50, 2022
4FCX
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BU of 4fcx by Molmil
S.pombe Mre11 apoenzym
Descriptor: DNA repair protein rad32, MANGANESE (II) ION
Authors:Schiller, C.B, Lammens, K, Hopfner, K.P.
Deposit date:2012-05-25
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling.
Nat.Struct.Mol.Biol., 19, 2012
4FBW
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BU of 4fbw by Molmil
Crystal structure of an unfused Mre11-Nbs1 complex with two manganese ions per active site
Descriptor: DNA repair and telomere maintenance protein nbs1, DNA repair protein rad32, MANGANESE (II) ION
Authors:Schiller, C.B, Lammens, K, Hopfner, K.P.
Deposit date:2012-05-23
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling.
Nat.Struct.Mol.Biol., 19, 2012
4FBQ
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BU of 4fbq by Molmil
Crystal structure of a covalently fused Nbs1-Mre11 complex with two manganese ions per active site
Descriptor: DNA repair and telomere maintenance protein nbs1,DNA repair protein rad32 CHIMERIC PROTEIN, MANGANESE (II) ION
Authors:Schiller, C.B, Lammens, K, Hopfner, K.P.
Deposit date:2012-05-23
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling.
Nat.Struct.Mol.Biol., 19, 2012
4FBK
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BU of 4fbk by Molmil
Crystal structure of a covalently fused Nbs1-Mre11 complex with one manganese ion per active site
Descriptor: DNA repair and telomere maintenance protein nbs1,DNA repair protein rad32 CHIMERIC PROTEIN, MANGANESE (II) ION, SULFATE ION
Authors:Schiller, C.B, Lammens, K, Hopfner, K.P.
Deposit date:2012-05-23
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.379 Å)
Cite:Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling.
Nat.Struct.Mol.Biol., 19, 2012
2W4R
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BU of 2w4r by Molmil
Crystal structure of the regulatory domain of human LGP2
Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION
Authors:Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P.
Deposit date:2008-12-01
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA.
Nucleic Acids Res., 37, 2009
2R8J
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BU of 2r8j by Molmil
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Cisplatin, ...
Authors:Carell, T, Alt, A, Lammens, K.
Deposit date:2007-09-11
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta
Science, 318, 2007
2R8K
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BU of 2r8k by Molmil
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*DGP*DTP*DGP*DGP*DTP*DGP*DAP*DGP*DC)-3', 5'-D(P*DGP*DGP*DCP*DTP*DCP*DAP*DCP*DCP*DAP*DC)-3', ...
Authors:Carell, T, Alt, A, Lammens, K.
Deposit date:2007-09-11
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta
Science, 318, 2007
6S85
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BU of 6s85 by Molmil
Cutting state of the E. coli Mre11-Rad50 (SbcCD) head complex bound to ADP and dsDNA.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (31-MER), DNA (32-MER), ...
Authors:Kaeshammer, L, Saathoff, J.H, Gut, F, Bartho, J, Alt, A, Kessler, B, Lammens, K, Hopfner, K.P.
Deposit date:2019-07-08
Release date:2019-09-04
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Mechanism of DNA End Sensing and Processing by the Mre11-Rad50 Complex.
Mol.Cell, 76, 2019
6RR9
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BU of 6rr9 by Molmil
DNA/RNA binding protein
Descriptor: GLYCEROL, SULFATE ION, Schlafen family member 5, ...
Authors:Huber, E, Lammens, K.
Deposit date:2019-05-17
Release date:2020-07-08
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (3.432 Å)
Cite:Structural and biochemical characterization of human Schlafen 5.
Nucleic Acids Res., 2022
6S6V
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BU of 6s6v by Molmil
Resting state of the E. coli Mre11-Rad50 (SbcCD) head complex bound to ATPgS
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, Nuclease SbcCD subunit C, ...
Authors:Kaeshammer, L, Saathoff, J.H, Gut, F, Bartho, J, Alt, A, Kessler, B, Lammens, K, Hopfner, K.P.
Deposit date:2019-07-03
Release date:2019-09-04
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of DNA End Sensing and Processing by the Mre11-Rad50 Complex.
Mol.Cell, 76, 2019
4I1R
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BU of 4i1r by Molmil
Human MALT1 (caspase-IG3) in complex with thioridazine
Descriptor: 10-{2-[(2S)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Schlauderer, F, Lammens, K, Hopfner, K.P.
Deposit date:2012-11-21
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Analysis of Phenothiazine Derivatives as Allosteric Inhibitors of the MALT1 Paracaspase.
Angew.Chem.Int.Ed.Engl., 52, 2013
4I1P
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BU of 4i1p by Molmil
Human MALT1 (caspase-IG3) in complex with activity based-probe
Descriptor: ACETATE ION, Mucosa-associated lymphoid tissue lymphoma translocation protein 1, tetrapeptide
Authors:Schlauderer, F, Lammens, K, Hopfner, K.P.
Deposit date:2012-11-21
Release date:2014-07-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Activity-Based Probes for Detection of Active MALT1 Paracaspase in Immune Cells and Lymphomas.
Chem.Biol., 22, 2015
7NI6
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BU of 7ni6 by Molmil
Human ATM kinase with bound ATPyS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM, ...
Authors:Stakyte, K, Rotheneder, M, Lammens, K, Bartho, J.D.
Deposit date:2021-02-11
Release date:2021-09-01
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7NI5
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BU of 7ni5 by Molmil
Human ATM kinase with bound inhibitor KU-55933
Descriptor: 2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-one, Serine-protein kinase ATM, ZINC ION
Authors:Bartho, J.D, Stakyte, K, Rotheneder, M, Lammens, K, Hopfner, K.P.
Deposit date:2021-02-11
Release date:2021-09-01
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7ZR1
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BU of 7zr1 by Molmil
Chaetomium thermophilum Mre11-Rad50-Nbs1 complex bound to ATPyS (composite structure)
Descriptor: DH domain-containing protein, Double-strand break repair protein, FHA domain-containing protein, ...
Authors:Bartho, J.D, Rotheneder, M, Stakyte, K, Lammens, K, Hopfner, K.P.
Deposit date:2022-05-03
Release date:2023-01-11
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of the Mre11-Rad50-Nbs1 complex reveals the molecular mechanism of scaffolding functions.
Mol.Cell, 83, 2023

 

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