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7TQV
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BU of 7tqv by Molmil
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Descriptor: RNA (33-MER), Uridylate-specific endoribonuclease
Authors:Frazier, M.N, Krahn, J.M, Butay, K.J, Dillard, L.B, Borgnia, M.J, Stanley, R.E.
Deposit date:2022-01-27
Release date:2022-03-23
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Flipped over U: structural basis for dsRNA cleavage by the SARS-CoV-2 endoribonuclease.
Nucleic Acids Res., 50, 2022
7TJ2
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BU of 7tj2 by Molmil
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Descriptor: RNA (31-MER), Uridylate-specific endoribonuclease nsp15
Authors:Frazier, M.N, Krahn, J.M, Butay, K.J, Dillard, L.B, Borgnia, M.J, Stanley, R.E.
Deposit date:2022-01-14
Release date:2022-03-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Flipped over U: structural basis for dsRNA cleavage by the SARS-CoV-2 endoribonuclease.
Nucleic Acids Res., 50, 2022
8E4O
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BU of 8e4o by Molmil
The closed C1-state mouse TRPM8 structure in complex with putative PI(4,5)P2
Descriptor: Transient receptor potential cation channel subfamily M member 8, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
8E4N
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BU of 8e4n by Molmil
The closed C1-state mouse TRPM8 structure in complex with PI(4,5)P2
Descriptor: Transient receptor potential cation channel subfamily M member 8, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
8E4L
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BU of 8e4l by Molmil
The open state mouse TRPM8 structure in complex with the cooling agonist C3, AITC, and PI(4,5)P2
Descriptor: 3-isothiocyanatoprop-1-ene, CALCIUM ION, Transient receptor potential cation channel subfamily M member 8, ...
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
8E4Q
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BU of 8e4q by Molmil
The closed C0-state flycatcher TRPM8 structure in complex with PI(4,5)P2
Descriptor: Transient receptor potential cation channel subfamily M member 8, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
8E4P
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BU of 8e4p by Molmil
Mouse TRPM8 structure determined in the ligand- and PI(4,5)P2-free condition, Class I , C0 state
Descriptor: CHOLESTEROL HEMISUCCINATE, Transient receptor potential cation channel subfamily M member 8
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
8E4M
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BU of 8e4m by Molmil
The intermediate C2-state mouse TRPM8 structure in complex with the cooling agonist C3 and PI(4,5)P2
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 8, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
Authors:Yin, Y, Zhang, F, Feng, S, Butay, K.J, Borgnia, M.J, Im, W, Lee, S.-Y.
Deposit date:2022-08-18
Release date:2022-10-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP 2.
Science, 378, 2022
7TPR
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BU of 7tpr by Molmil
Camel nanobodies 7A3 and 8A2 broadly neutralize SARS-CoV-2 variants
Descriptor: Nanobody 7A3, Nanobody 8A2, Spike glycoprotein
Authors:Butay, K.J, Zhu, J, Dandey, V.P, Hong, J, Kwon, H.J, Chen, C.Z, Duan, Z, Li, D, Ren, H, Liang, T, Martin, N, Esposito, D, Ortega-Rodriguez, U, Xu, M, Xie, H, Ho, M, Cachau, R, Borgnia, M.J.
Deposit date:2022-01-25
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Camel nanobodies broadly neutralize SARS-CoV-2 variants
bioRxiv, 2021
8ET7
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BU of 8et7 by Molmil
Cryo-EM structure of the organic cation transporter 1 in complex with diphenhydramine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-[2-(BENZHYDRYLOXY)ETHYL]-N,N-DIMETHYLAMINE, OCT1
Authors:Suo, Y, Wright, N.J, Lee, S.-Y.
Deposit date:2022-10-16
Release date:2023-05-31
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Molecular basis of polyspecific drug and xenobiotic recognition by OCT1 and OCT2.
Nat.Struct.Mol.Biol., 30, 2023
8ET8
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BU of 8et8 by Molmil
Cryo-EM structure of the organic cation transporter 1 in complex with verapamil
Descriptor: (2S)-2-(3,4-dimethoxyphenyl)-5-{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino}-2-(propan-2-yl)pentanenitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, OCT1
Authors:Suo, Y, Wright, N.J, Lee, S.-Y.
Deposit date:2022-10-16
Release date:2023-05-31
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Molecular basis of polyspecific drug and xenobiotic recognition by OCT1 and OCT2.
Nat.Struct.Mol.Biol., 30, 2023
8ET9
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BU of 8et9 by Molmil
Cryo-EM structure of the organic cation transporter 2 in complex with 1-methyl-4-phenylpyridinium
Descriptor: 1-methyl-4-phenylpyridin-1-ium, OCT2
Authors:Suo, Y, Wright, N.J, Lee, S.-Y.
Deposit date:2022-10-16
Release date:2023-05-31
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Molecular basis of polyspecific drug and xenobiotic recognition by OCT1 and OCT2.
Nat.Struct.Mol.Biol., 30, 2023
8ET6
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BU of 8et6 by Molmil
Cryo-EM structure of the organic cation transporter 1 in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, OCT1
Authors:Suo, Y, Wright, N.J, Lee, S.-Y.
Deposit date:2022-10-16
Release date:2023-05-31
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Molecular basis of polyspecific drug and xenobiotic recognition by OCT1 and OCT2.
Nat.Struct.Mol.Biol., 30, 2023
7UXA
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BU of 7uxa by Molmil
Human tRNA Splicing Endonuclease Complex bound to pre-tRNA-ARG
Descriptor: MAGNESIUM ION, RNA (78-MER), tRNA-splicing endonuclease subunit Sen15, ...
Authors:Stanley, R.E, Hayne, C.K.
Deposit date:2022-05-05
Release date:2023-02-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structural basis for pre-tRNA recognition and processing by the human tRNA splicing endonuclease complex.
Nat.Struct.Mol.Biol., 30, 2023

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PDB entries from 2024-08-14

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