Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6UT4
DownloadVisualize
BU of 6ut4 by Molmil
Cryo-EM structure of the asymmetric AAA+ domain hexamer from Thermococcus gammatolerans McrB
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, MAGNESIUM ION
Authors:Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T.
Deposit date:2019-10-29
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes.
Nat Commun, 11, 2020
6URG
DownloadVisualize
BU of 6urg by Molmil
Cryo-EM structure of human CPSF160-WDR33-CPSF30-CPSF100 PIM complex
Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 4, ...
Authors:Sun, Y, Zhang, Y, Walz, T, Tong, L.
Deposit date:2019-10-23
Release date:2019-11-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery.
Mol.Cell, 77, 2020
6UZL
DownloadVisualize
BU of 6uzl by Molmil
Cryo-EM structure of nucleotide-free MsbA reconstituted into peptidiscs, conformation 2
Descriptor: Lipid A export ATP-binding/permease protein MsbA
Authors:Angiulli, G, Walz, T, Dhupar, H.S, Suzuki, H, Wason, I.S, Duong Van Hoa, F.
Deposit date:2019-11-15
Release date:2020-03-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:New approach for membrane protein reconstitution into peptidiscs and basis for their adaptability to different proteins.
Elife, 9, 2020
6UT5
DownloadVisualize
BU of 6ut5 by Molmil
Cryo-EM structure of the Thermococcus gammatolerans McrBC complex
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T.
Deposit date:2019-10-29
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes.
Nat Commun, 11, 2020
6V4P
DownloadVisualize
BU of 6v4p by Molmil
Structure of the integrin AlphaIIbBeta3-Abciximab complex
Descriptor: Abciximab, heavy chain, light chain, ...
Authors:Nesic, D, Zhang, Y, Spasic, A, Li, J, Provasi, D, Filizola, M, Walz, T, Coller, B.S.
Deposit date:2019-11-28
Release date:2020-02-05
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-Electron Microscopy Structure of the alpha IIb beta 3-Abciximab Complex.
Arterioscler Thromb Vasc Biol., 40, 2020
6UZH
DownloadVisualize
BU of 6uzh by Molmil
Cryo-EM structure of mechanosensitive channel MscS reconstituted into peptidiscs
Descriptor: Small-conductance mechanosensitive channel
Authors:Angiulli, G, Walz, T, Dhupar, H.S, Suzuki, H, Wason, I.S, Duong Van Hoa, F.
Deposit date:2019-11-15
Release date:2020-03-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:New approach for membrane protein reconstitution into peptidiscs and basis for their adaptability to different proteins.
Elife, 9, 2020
6UZ2
DownloadVisualize
BU of 6uz2 by Molmil
Cryo-EM structure of nucleotide-free MsbA reconstituted into peptidiscs, conformation 1
Descriptor: Lipid A export ATP-binding/permease protein MsbA
Authors:Angiulli, G, Walz, T, Dhupar, H.S, Suzuki, H, Wason, I.S, Duong Van Hoa, F.
Deposit date:2019-11-14
Release date:2020-03-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:New approach for membrane protein reconstitution into peptidiscs and basis for their adaptability to different proteins.
Elife, 9, 2020
6URO
DownloadVisualize
BU of 6uro by Molmil
Cryo-EM structure of human CPSF160-WDR33-CPSF30-PAS RNA-CstF77 complex
Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, Cleavage stimulation factor subunit 3, ...
Authors:Sun, Y, Zhang, Y, Walz, T, Tong, L.
Deposit date:2019-10-23
Release date:2019-11-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery.
Mol.Cell, 77, 2020
6V4X
DownloadVisualize
BU of 6v4x by Molmil
Cryo-EM structure of an active human histone pre-mRNA 3'-end processing machinery at 3.2 Angstrom resolution
Descriptor: Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 3, Small nuclear ribonucleoprotein E, ...
Authors:Sun, Y, Zhang, Y, Walz, T, Tong, L.
Deposit date:2019-12-02
Release date:2020-02-19
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of an active human histone pre-mRNA 3'-end processing machinery.
Science, 367, 2020
6MK0
DownloadVisualize
BU of 6mk0 by Molmil
Integrin AlphaVBeta3 ectodomain bound to antagonist TDI-4161
Descriptor: (2S)-2-[(1,3-benzothiazole-2-carbonyl)amino]-4-{[5-(1,8-naphthyridin-2-yl)pentanoyl]amino}butanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:van Agthoven, J, Arnaout, M.A.
Deposit date:2018-09-24
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Novel Pure alphaVbeta3 Integrin Antagonists That Do Not Induce Receptor Extension, Prime the Receptor, or Enhance Angiogenesis at Low Concentrations
Acs Pharmacol Transl Sci, 2, 2019
5K8D
DownloadVisualize
BU of 5k8d by Molmil
Crystal structure of rFVIIIFc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (II) ION, ...
Authors:Leksa, N, Quan, C.
Deposit date:2016-05-29
Release date:2017-06-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.19 Å)
Cite:The structural basis for the functional comparability of factor VIII and the long-acting variant recombinant factor VIII Fc fusion protein.
J. Thromb. Haemost., 15, 2017
4XHQ
DownloadVisualize
BU of 4xhq by Molmil
Re-refinement the crystal structure of Dscam1 isoform 1.34, N-terminal four Ig domains
Descriptor: CHLORIDE ION, Dscam, GLYCEROL, ...
Authors:Chen, Q, Yu, Y.
Deposit date:2015-01-06
Release date:2016-10-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
8SOJ
DownloadVisualize
BU of 8soj by Molmil
Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the absence of telomeric ssDNA
Descriptor: CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ...
Authors:Cai, S.W.
Deposit date:2023-04-28
Release date:2023-06-07
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:POT1 recruits and regulates CST-Pol alpha /Primase at human telomeres.
Biorxiv, 2023
8SOK
DownloadVisualize
BU of 8sok by Molmil
Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the presence of telomeric ssDNA
Descriptor: CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ...
Authors:Cai, S.W.
Deposit date:2023-04-28
Release date:2023-06-07
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:POT1 recruits and regulates CST-Pol alpha /Primase at human telomeres.
Biorxiv, 2023
4GL2
DownloadVisualize
BU of 4gl2 by Molmil
Structural Basis for dsRNA duplex backbone recognition by MDA5
Descriptor: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(*AP*UP*CP*CP*GP*CP*GP*GP*CP*CP*CP*U)-3'), ...
Authors:Wu, B, Hur, S.
Deposit date:2012-08-13
Release date:2013-01-09
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (3.557 Å)
Cite:Structural Basis for dsRNA Recognition, Filament Formation, and Antiviral Signal Activation by MDA5.
Cell(Cambridge,Mass.), 152, 2013
2WGH
DownloadVisualize
BU of 2wgh by Molmil
Human Ribonucleotide reductase R1 subunit (RRM1) in complex with dATP and Mg.
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Welin, R.M, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kragh-Nielsen, T, Kotzsch, A, Kotenyova, T, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Schutz, P, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Wisniewska, M, Nordlund, P.
Deposit date:2009-04-19
Release date:2009-05-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Allosteric Regulation of Human Ribonucleotide Reductase by Nucleotide-Induced Oligomerization.
Nat.Struct.Mol.Biol., 18, 2011
8FXJ
DownloadVisualize
BU of 8fxj by Molmil
Crystal structure of Fab460
Descriptor: ACETATE ION, CHLORIDE ION, Fab460, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-24
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
8FYM
DownloadVisualize
BU of 8fym by Molmil
Crystal structure of Fab235 in complex with MPER peptide
Descriptor: ALA-SER-LEU-TRP-ASN-TRP-PHE-ASN-ILE-THR-ASN-TRP-LEU-TRP-TYR-ILE-LYS-LYS-LYS, CHLORIDE ION, Fab235, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-26
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
8FZ2
DownloadVisualize
BU of 8fz2 by Molmil
Crystal structure of Fab460 in complex with MPER peptide
Descriptor: Fab460, H chain, L chain, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-27
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
8FWF
DownloadVisualize
BU of 8fwf by Molmil
Crystal structure of Apo form Fab235
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-21
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
6CO3
DownloadVisualize
BU of 6co3 by Molmil
aducanumab abeta complex
Descriptor: ALA-GLU-PHE-ARG-HIS-ASP, Fab heavy chain, Fab light chain, ...
Authors:Arndt, J.W.
Deposit date:2018-03-10
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.384 Å)
Cite:Structural and kinetic basis for the selectivity of aducanumab for aggregated forms of amyloid-beta.
Sci Rep, 8, 2018
3V4V
DownloadVisualize
BU of 3v4v by Molmil
crystal structure of a4b7 headpiece complexed with Fab ACT-1 and RO0505376
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yu, Y, Zhu, J, Springer, T.A.
Deposit date:2011-12-15
Release date:2012-01-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural specializations of a4b7, an Integrin that Mediates Rolling Adhesion
J.Cell Biol., 196, 2012
3V4P
DownloadVisualize
BU of 3v4p by Molmil
crystal structure of a4b7 headpiece complexed with Fab ACT-1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yu, Y, Zhu, J, Springer, T.A.
Deposit date:2011-12-15
Release date:2012-01-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural specializations of a4b7, an Integrin that Mediates Rolling Adhesion
J.Cell Biol., 196, 2012
6CNR
DownloadVisualize
BU of 6cnr by Molmil
aducanumab apo Fab
Descriptor: Aducanumab heavy chain, Aducanumab light chain, SULFATE ION
Authors:Arndt, J.W.
Deposit date:2018-03-08
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and kinetic basis for the selectivity of aducanumab for aggregated forms of amyloid-beta.
Sci Rep, 8, 2018
2X29
DownloadVisualize
BU of 2x29 by Molmil
Crystal structure of human4-1BB ligand ectodomain
Descriptor: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 9
Authors:Won, E.Y, Cho, H.S.
Deposit date:2010-01-12
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structure of the Trimer of Human 4-1Bb Ligand is Unique Among Members of the Tumor Necrosis Factor Superfamily.
J.Biol.Chem., 285, 2010

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon