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7OMK
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BU of 7omk by Molmil
The NMR structure of the Zf-GRF domains from the mouse Endonuclease VIII-LIKE 3 (mNEIL3)
Descriptor: Endonuclease 8-like 3
Authors:Dinesh, D.C, Huskova, A, Srb, P, Veverka, V, Silhan, J.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Model of abasic site DNA cross-link repair; from the architecture of NEIL3 DNA binding domains to the X-structure model.
Nucleic Acids Res., 50, 2022
4FCG
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BU of 4fcg by Molmil
Structure of the leucine-rich repeat domain of the type III effector XCV3220 (XopL)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Singer, A.U, Xu, X, Cui, H, Zimmerman, M.D, Minor, W, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-24
Release date:2012-06-13
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the leucine-rich repeat domain of the type III effector XCV3220 (XopL)
To be Published
7P5G
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BU of 7p5g by Molmil
NMR structure of a peptide deriving from SARS-CoV-2 S RBD 482-506 fragment in HFIP/H2O
Descriptor: Spike glycoprotein
Authors:Santoro, A, Buonocore, M, Grimaldi, M, D'Ursi, A.M.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural analysis of a simplified model reproducing SARS-CoV-2 S RBD/ACE2 binding site.
Heliyon, 8, 2022
4RK2
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BU of 4rk2 by Molmil
Crystal structure of sugar transporter RHE_PF00321 from Rhizobium etli, target EFI-510806, an open conformation
Descriptor: ACETATE ION, CHLORIDE ION, Putative sugar ABC transporter, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-11
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Sugar Transporter RHE_Pf00321 from Rhizobium Etli, Target EFI-510806
To be Published
4RKR
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BU of 4rkr by Molmil
Crystal structure of LacI family transcriptional regulator from Arthrobacter sp. FB24, target EFI-560007, complex with lactose
Descriptor: Transcriptional regulator, LacI family, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Burley, S.K, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-13
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of LacI Transcriptional Regulator PurR from Arthrobacter Sp, Target Nysgxrc 11027R
To be Published
7P5S
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BU of 7p5s by Molmil
NMR structure of a peptide deriving from SARS-CoV-2 Lineages P.1 and B.1.351 S RBD 482-506 fragment in HFIP/H2O
Descriptor: Spike glycoprotein
Authors:Santoro, A, Buonocore, M, Grimaldi, M, D'Ursi, A.M.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural analysis of a simplified model reproducing SARS-CoV-2 S RBD/ACE2 binding site.
Heliyon, 8, 2022
5I00
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BU of 5i00 by Molmil
tRNA guanine transglycosylase (TGT) in co-crystallized complex with 6-amino-4-{2-[(cyclopentylmethyl)amino]ethyl}-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Descriptor: 1,2-ETHANEDIOL, 6-amino-4-{2-[(cyclopentylmethyl)amino]ethyl}-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, CHLORIDE ION, ...
Authors:Ehrmann, F.R, Heine, A, Klebe, G.
Deposit date:2016-02-03
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Co-crystallization, Isothermal titration calorimetry and nanoESI-MS reveal dimer disturbing inhibitors
To be Published
7P2O
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BU of 7p2o by Molmil
NMR solution structure of SUD-C domain of SARS-CoV-2
Descriptor: Non-structural protein 3
Authors:Gallo, A, Tsika, A.C, Fourkiotis, N.K, Spyroulias, G.A.
Deposit date:2021-07-06
Release date:2022-07-20
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NMR solution structure of SUD-C domain of SARS-CoV-2
To Be Published
5I0H
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BU of 5i0h by Molmil
Crystal structure of myosin X motor domain in pre-powerstroke state
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Isabet, T, Blanc, F, Sweeney, H.L, Houdusse, A.
Deposit date:2016-02-04
Release date:2016-09-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The myosin X motor is optimized for movement on actin bundles.
Nat Commun, 7, 2016
4RMJ
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BU of 4rmj by Molmil
Human Sirt2 in complex with ADP ribose and nicotinamide
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
Deposit date:2014-10-21
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
5I07
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BU of 5i07 by Molmil
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-Amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Descriptor: 1,2-ETHANEDIOL, 6-AMINO-4-(2-PHENYLETHYL)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE, GLYCEROL, ...
Authors:Ehrmann, F.R, Nguyen, D, Heine, A, Klebe, G.
Deposit date:2016-02-03
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Co-crystallization, Isothermal titration calorimetry and nanoESI-MS reveal dimer disturbing inhibitors
To be Published
4RSH
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BU of 4rsh by Molmil
Structure of a putative lipolytic protein of G-D-S-L family from Desulfitobacterium hafniense DCB-2
Descriptor: CHLORIDE ION, Lipolytic protein G-D-S-L family
Authors:Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-07
Release date:2014-11-19
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure of a putative lipolytic protein of G-D-S-L family from Desulfitobacterium hafniense DCB-2
To be Published
5I48
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BU of 5i48 by Molmil
Erwinia chrysanthemi L-asparaginase A31I + E63Q mutation + Aspartic acid
Descriptor: ASPARTIC ACID, L-asparaginase
Authors:Nguyen, H.A, Lavie, A.
Deposit date:2016-02-11
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design and Characterization of Erwinia Chrysanthemi l-Asparaginase Variants with Diminished l-Glutaminase Activity.
J.Biol.Chem., 291, 2016
5JBL
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BU of 5jbl by Molmil
Structure of the bacteriophage T4 capsid assembly protease, gp21.
Descriptor: Prohead core protein protease
Authors:Fokine, A, Rossmann, M.G.
Deposit date:2016-04-13
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.943 Å)
Cite:Common Evolutionary Origin of Procapsid Proteases, Phage Tail Tubes, and Tubes of Bacterial Type VI Secretion Systems.
Structure, 24, 2016
4S2Y
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BU of 4s2y by Molmil
Structure of E. coli RppH bound to RNA and three magnesium ions
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA (5'-R(*(APC)*GP*U)-3'), ...
Authors:Vasilyev, N, Serganov, A.
Deposit date:2015-01-23
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of RNA Complexes with the Escherichia coli RNA Pyrophosphohydrolase RppH Unveil the Basis for Specific 5'-End-dependent mRNA Decay.
J.Biol.Chem., 290, 2015
2KIR
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BU of 2kir by Molmil
Solution structure of a designer toxin, mokatoxin-1
Descriptor: Designer toxin
Authors:Biancalana, M, Koide, A, Takacs, Z, Goldstein, S, Koide, S.
Deposit date:2009-05-07
Release date:2009-12-29
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:A designer ligand specific for Kv1.3 channels from a scorpion neurotoxin-based library.
Proc.Natl.Acad.Sci.USA, 106, 2009
7PJF
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BU of 7pjf by Molmil
Inhibiting parasite proliferation using a rationally designed anti-tubulin agent
Descriptor: Designed ankyrin repeat protein (DARPIN) D1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sharma, A, Gaillard, N, Ehrhard, V.A, Steinmetz, M.O.
Deposit date:2021-08-24
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:Inhibiting parasite proliferation using a rationally designed anti-tubulin agent.
Embo Mol Med, 13, 2021
7PJE
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BU of 7pje by Molmil
Inhibiting parasite proliferation using a rationally designed anti-tubulin agent
Descriptor: Darpin D1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sharma, A, Gaillard, N, Ehrhard, V.A, Steinmetz, M.O.
Deposit date:2021-08-24
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibiting parasite proliferation using a rationally designed anti-tubulin agent.
Embo Mol Med, 13, 2021
5JAI
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BU of 5jai by Molmil
Yersinia pestis FabV variant T276G
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Pschibul, A, Kuper, J, HIrschbeck, M, Kisker, C.
Deposit date:2016-04-12
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selectivity of Pyridone- and Diphenyl Ether-Based Inhibitors for the Yersinia pestis FabV Enoyl-ACP Reductase.
Biochemistry, 55, 2016
1CVR
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BU of 1cvr by Molmil
Crystal structure of the Arg specific cysteine proteinase gingipain R (RGPB)
Descriptor: CALCIUM ION, D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-phenylalaninamide, GINGIPAIN R, ...
Authors:Eichinger, A, Beisel, H.-G.
Deposit date:1999-08-24
Release date:2000-03-01
Last modified:2013-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of gingipain R: an Arg-specific bacterial cysteine proteinase with a caspase-like fold.
EMBO J., 18, 1999
4RW5
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BU of 4rw5 by Molmil
Structural insights into substrate binding of brown spider venom class II phospholipases D
Descriptor: GLYCEROL, MAGNESIUM ION, N-TRIDECANOIC ACID, ...
Authors:Coronado, M.A, Ullah, A, da Silva, L.S, Chaves-Moreira, D, Vuitika, L, Chaim, O.M, Veiga, S.S, Chahine, J, Murakami, M.T, Arni, R.K.
Deposit date:2014-12-01
Release date:2015-06-03
Last modified:2015-12-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D.
Curr Protein Pept Sci, 16, 2015
4TQH
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BU of 4tqh by Molmil
Human transthyretin (TTR) complexed with 3-(9H-fluoren-9-ylideneaminooxy)ethanoic acid
Descriptor: 1,2-ETHANEDIOL, Transthyretin, [(9H-fluoren-9-ylideneamino)oxy]acetic acid
Authors:Ciccone, L, Nencetti, S, Rossello, A, Orlandini, E, Stura, E.A.
Deposit date:2014-06-11
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.511 Å)
Cite:X-ray crystal structure and activity of fluorenyl-based compounds as transthyretin fibrillogenesis inhibitors.
J Enzyme Inhib Med Chem, 2015
4RWE
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BU of 4rwe by Molmil
The crystal structure of a sugar-binding transport protein from Yersinia pestis CO92
Descriptor: CHLORIDE ION, GLYCEROL, Sugar-binding transport protein
Authors:Tan, K, Zhou, M, Clancy, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-12-03
Release date:2014-12-31
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of a sugar-binding transport protein from Yersinia pestis CO92
To be Published
4RWO
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BU of 4rwo by Molmil
Crystal structure of the porcine OAS1 L149R mutant in complex with dsRNA and ApCpp in the AMP donor position
Descriptor: 2'-5'-oligoadenylate synthase 1, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
Authors:Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R.
Deposit date:2014-12-05
Release date:2015-05-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity.
Structure, 23, 2015
5JG7
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BU of 5jg7 by Molmil
Crystal structure of putative periplasmic binding protein from Salmonella typhimurium LT2
Descriptor: Fur regulated Salmonella iron transporter, GLYCEROL
Authors:Chang, C, Zhou, M, Shatsman, S, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-04-19
Release date:2016-04-27
Last modified:2016-07-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of putative periplasmic binding protein from Salmonella typhimurium LT2
To Be Published

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