1I6U
| RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | Descriptor: | 16S RRNA FRAGMENT, 30S RIBOSOMAL PROTEIN S8P, SULFATE ION | Authors: | Tishchenko, S, Nikulin, A, Fomenkova, N, Nevskaya, N, Nikonov, O, Dumas, P, Moine, H, Ehresmann, B, Ehresmann, C, Piendl, W, Lamzin, V, Garber, M, Nikonov, S. | Deposit date: | 2001-03-05 | Release date: | 2001-08-03 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii. J.Mol.Biol., 311, 2001
|
|
1DWU
| Ribosomal protein L1 | Descriptor: | RIBOSOMAL PROTEIN L1 | Authors: | Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W. | Deposit date: | 1999-12-13 | Release date: | 2000-12-07 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface Acta Crystallogr.,Sect.D, 58, 2002
|
|
2HW8
| Structure of ribosomal protein L1-mRNA complex at 2.1 resolution. | Descriptor: | 1,4-BUTANEDIOL, 36-MER, 50S ribosomal protein L1, ... | Authors: | Tishchenko, S, Nikonova, E, Nikulin, A, Nevskaya, N, Volchkov, S, Piendl, W, Garber, M, Nikonov, S. | Deposit date: | 2006-08-01 | Release date: | 2006-12-19 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of the ribosomal protein L1-mRNA complex at 2.1 A resolution: common features of crystal packing of L1-RNA complexes. ACTA CRYSTALLOGR.,SECT.D, 62, 2006
|
|
1BXY
| CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L30 FROM THERMUS THERMOPHILUS AT 1.9 A RESOLUTION: CONFORMATIONAL FLEXIBILITY OF THE MOLECULE. | Descriptor: | PROTEIN (RIBOSOMAL PROTEIN L30) | Authors: | Fedorov, R, Nevskaya, N, Khairullina, A, Tishchenko, S, Mikhailov, A, Garber, M, Nikonov, S. | Deposit date: | 1998-10-09 | Release date: | 1998-10-14 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of ribosomal protein L30 from Thermus thermophilus at 1.9 A resolution: conformational flexibility of the molecule. Acta Crystallogr.,Sect.D, 55, 1999
|
|
5DY9
| Y68T Hfq from Methanococcus jannaschii in complex with AMP | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... | Authors: | Nikulin, A.D, Mikhailina, A.O, Lekontseva, N.V, Balobanov, V.A, Nikonova, E.Y, Tishchenko, S.V. | Deposit date: | 2015-09-24 | Release date: | 2016-09-28 | Last modified: | 2017-05-24 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
|
|
8P9U
| Crystal Structure of Two-Domain Laccase mutant M199A/D268N from Streptomyces griseoflavus | Descriptor: | CALCIUM ION, COPPER (II) ION, OXYGEN MOLECULE, ... | Authors: | Kolyadenko, I.A, Tishchenko, S.V, Gabdulkhakov, A.G. | Deposit date: | 2023-06-06 | Release date: | 2024-04-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural Insight into the Amino Acid Environment of the Two-Domain Laccase's Trinuclear Copper Cluster. Int J Mol Sci, 24, 2023
|
|
4X9C
| 1.4A crystal structure of Hfq from Methanococcus jannaschii | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | Authors: | Nikulin, A.D, Tishchenko, S.V, Nikonova, S.V, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | Deposit date: | 2014-12-11 | Release date: | 2014-12-24 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
|
|
4X9D
| High-resolution structure of Hfq from Methanococcus jannaschii in complex with UMP | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | Authors: | Nikulin, A.D, Tishchenko, S.V, Nikonova, E.Y, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | Deposit date: | 2014-12-11 | Release date: | 2015-12-23 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
|
|
5I6S
| Crystal structure of an endoglucanase from Penicillium verruculosum | Descriptor: | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, endoglucanase | Authors: | Nemashklaov, V, Vakhrusheva, A, Tishchenko, S, Gabdulkhakov, A, Kravchenko, O, Gusakov, A, Sinitsyn, A. | Deposit date: | 2016-02-16 | Release date: | 2017-03-01 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of an endoglucanase from Penicillium verruculosum To Be Published
|
|
1ZHO
| The structure of a ribosomal protein L1 in complex with mRNA | Descriptor: | 50S ribosomal protein L1, POTASSIUM ION, mRNA | Authors: | Nevskaya, N, Tishchenko, S, Volchkov, S, Kljashtorny, V, Nikonova, E, Nikonov, O, Nikulin, A, Kohrer, C, Piendl, W, Zimmermann, R, Stockley, P, Garber, M, Nikonov, S. | Deposit date: | 2005-04-26 | Release date: | 2006-05-09 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | New insights into the interaction of ribosomal protein L1 with RNA. J.Mol.Biol., 355, 2006
|
|
2VPL
| The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii | Descriptor: | 50S RIBOSOMAL PROTEIN L1, FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE, POTASSIUM ION | Authors: | Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Garber, M. | Deposit date: | 2008-03-01 | Release date: | 2008-09-23 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Domain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA. J. Mol. Biol., 383, 2008
|
|
8P9V
| Crystal Structure of Two-Domain Laccase mutant M199G/R240H/D268N from Streptomyces griseoflavus | Descriptor: | COPPER (II) ION, OXYGEN MOLECULE, PEROXIDE ION, ... | Authors: | Kolyadenko, I.A, Tishchenko, S.V, Gabdulkhakov, A.G. | Deposit date: | 2023-06-06 | Release date: | 2024-04-10 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural Insight into the Amino Acid Environment of the Two-Domain Laccase's Trinuclear Copper Cluster. Int J Mol Sci, 24, 2023
|
|
1MZP
| Structure of the L1 protuberance in the ribosome | Descriptor: | 50s ribosomal protein L1P, MAGNESIUM ION, fragment of 23S rRNA | Authors: | Nikulin, A, Eliseikina, I, Tishchenko, S, Nevskaya, N, Davydova, N, Platonova, O, Piendl, W, Selmer, M, Liljas, A, Zimmermann, R, Garber, M, Nikonov, S. | Deposit date: | 2002-10-09 | Release date: | 2003-01-21 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Structure of the L1 protuberance in the ribosome. Nat.Struct.Biol., 10, 2003
|
|
3QOY
| Crystal structure of ribosomal protein L1 from Aquifex aeolicus | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 50S ribosomal protein L1, ACETIC ACID, ... | Authors: | Gabdulkhakov, A.G, Tishchenko, S.V, Nikonova, E.U, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Nevskaya, N.A. | Deposit date: | 2011-02-11 | Release date: | 2011-12-28 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structure of Ribosomal Protein L1 from the Bacterium Aquifex Aeolicus Crystallography Reports, 56, 2011
|
|
1U63
| THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-mRNA COMPLEX | Descriptor: | 49 NT FRAGMENT OF MRNA FOR L1, 50S ribosomal protein L1P | Authors: | Nevskaya, N, Tishchenko, S, Gabdoulkhakov, A, Nikonova, E, Nikonov, O, Nikulin, A, Garber, M, Nikonov, S, Piendl, W. | Deposit date: | 2004-07-29 | Release date: | 2005-04-12 | Last modified: | 2016-11-30 | Method: | X-RAY DIFFRACTION (3.4 Å) | Cite: | Ribosomal protein L1 recognizes the same specific structural motif in its target sites on the autoregulatory mRNA and 23S rRNA. Nucleic Acids Res., 33, 2005
|
|
8B7W
| Complex IL-17A/anti-IL-17A-76 | Descriptor: | CHLORIDE ION, GLYCEROL, Interleukin-17A, ... | Authors: | Kostareva, O.S, Svoeglazova, A, Kolyadenko, I.A, Dzhus, U.F, Tishchenko, S.V, Gabdulkhakov, A.G. | Deposit date: | 2022-10-03 | Release date: | 2022-12-28 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Two Epitope Regions Revealed in the Complex of IL-17A and Anti-IL-17A V H H Domain. Int J Mol Sci, 23, 2022
|
|
4F9T
| Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L1, ... | Authors: | Kljashtorny, V.G, Volchkov, S.A, Nikonova, E.Y, Kostareva, O.S, Tishchenko, S.V, Nevskaya, N.A, Nikonov, S.V. | Deposit date: | 2012-05-21 | Release date: | 2012-08-08 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.46 Å) | Cite: | [Crystal structures of mutant ribosomal proteins L1]. MOL.BIOL.(MOSCOW), 41, 2007
|
|
4REO
| Mutant ribosomal protein l1 from thermus thermophilus with threonine 217 replaced by valine | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L1, GLYCINE, ... | Authors: | Gabdulkhakov, A.G, Nevskaya, N.A, Tishchenko, S.V, Nikonov, S.V. | Deposit date: | 2014-09-23 | Release date: | 2015-03-18 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Protein-RNA affinity of ribosomal protein L1 mutants does not correlate with the number of intermolecular interactions. Acta Crystallogr.,Sect.D, 71, 2015
|
|
4LQ4
| crystal structure of mutant ribosomal protein L1 from Methanococcus jannaschii with deletion of 8 residues from C-terminus | Descriptor: | 50S ribosomal protein L1, CHLORIDE ION, ISOPROPYL ALCOHOL, ... | Authors: | Gabdulkhakov, A.G, Tishchenko, S.V, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Sarskikh, A.V. | Deposit date: | 2013-07-17 | Release date: | 2014-07-02 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Crystal structure of a mutant of archaeal ribosomal protein L1 from Methanococcus jannaschii Crystallography Reports, 59, 2014
|
|
4IGU
| |
7PFR
| |
7PES
| Crystal Structure of Two-Domain Laccase mutant M199G from Streptomyces griseoflavus | Descriptor: | COPPER (II) ION, OXYGEN MOLECULE, SODIUM ION, ... | Authors: | Gabdulkhakov, A, Tishchenko, S, Kolyadenko, I. | Deposit date: | 2021-08-11 | Release date: | 2022-01-19 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Engineering the Catalytic Properties of Two-Domain Laccase from Streptomyces griseoflavus Ac-993. Int J Mol Sci, 23, 2021
|
|
7PEN
| |
7PTM
| Crystal Structure of Two-Domain Laccase mutant M199G/R240H from Streptomyces griseoflavus | Descriptor: | COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ... | Authors: | Gabdulkhakov, A, Tishchenko, S, Kolyadenko, I. | Deposit date: | 2021-09-27 | Release date: | 2022-01-19 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Engineering the Catalytic Properties of Two-Domain Laccase from Streptomyces griseoflavus Ac-993. Int J Mol Sci, 23, 2021
|
|
7PU0
| |