8P91
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6XYJ
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4X9C
| 1.4A crystal structure of Hfq from Methanococcus jannaschii | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | Authors: | Nikulin, A.D, Tishchenko, S.V, Nikonova, S.V, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | Deposit date: | 2014-12-11 | Release date: | 2014-12-24 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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4X9D
| High-resolution structure of Hfq from Methanococcus jannaschii in complex with UMP | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | Authors: | Nikulin, A.D, Tishchenko, S.V, Nikonova, E.Y, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | Deposit date: | 2014-12-11 | Release date: | 2015-12-23 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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6TFL
| Lsm protein (SmAP) from Halobacterium salinarum | Descriptor: | CALCIUM ION, GLYCEROL, RNA-binding protein Lsm, ... | Authors: | Nikulin, A.D, Fando, M.S, Lekontseva, N.V. | Deposit date: | 2019-11-14 | Release date: | 2020-11-25 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.397 Å) | Cite: | Structure and RNA-Binding Properties of Lsm Protein from Halobacterium salinarum. Biochemistry Mosc., 86, 2021
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1KUQ
| CRYSTAL STRUCTURE OF T3C MUTANT S15 RIBOSOMAL PROTEIN IN COMPLEX WITH 16S RRNA | Descriptor: | 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, SULFATE ION | Authors: | Nikulin, A.D, Tishchenko, S, Revtovich, S, Ehresmann, B, Ehresmann, C, Dumas, P, Garber, M, Nikonov, S, Nevskaya, N. | Deposit date: | 2002-01-22 | Release date: | 2003-06-24 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.84 Å) | Cite: | Role of N-terminal helix in interaction of ribosomal protein S15 with 16S rRNA. Biochemistry Mosc., 69, 2004
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5MKI
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5MKL
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5I21
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1MZP
| Structure of the L1 protuberance in the ribosome | Descriptor: | 50s ribosomal protein L1P, MAGNESIUM ION, fragment of 23S rRNA | Authors: | Nikulin, A, Eliseikina, I, Tishchenko, S, Nevskaya, N, Davydova, N, Platonova, O, Piendl, W, Selmer, M, Liljas, A, Zimmermann, R, Garber, M, Nikonov, S. | Deposit date: | 2002-10-09 | Release date: | 2003-01-21 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Structure of the L1 protuberance in the ribosome. Nat.Struct.Biol., 10, 2003
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1U1T
| Hfq protein from Pseudomonas aeruginosa. High-salt crystals | Descriptor: | Hfq protein | Authors: | Nikulin, A.D, Stolboushkina, E.A, Perederina, A.A, Vassilieva, I.M, Blaesi, U, Moll, I, Kachalova, G, Yokoyama, S, Vassylyev, D, Garber, M, Nikonov, S.V, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-07-16 | Release date: | 2005-01-25 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of Pseudomonas aeruginosa Hfq protein. Acta Crystallogr.,Sect.D, 61, 2005
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3QUI
| Crystal structure of Pseudomonas aeruginosa Hfq in complex with ADPNP | Descriptor: | ADENINE, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ... | Authors: | Nikulin, A.D, Murina, V.N, Gabdulkhakov, A.G. | Deposit date: | 2011-02-24 | Release date: | 2012-02-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.933 Å) | Cite: | Hfq binds ribonucleotides in three different RNA-binding sites. Acta Crystallogr.,Sect.D, 69, 2013
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1U1S
| Hfq protein from Pseudomonas aeruginosa. Low-salt crystals | Descriptor: | Hfq protein | Authors: | Nikulin, A.D, Stolboushkina, E.A, Perederina, I, Vassilieva, I.M, Blaesi, U, Moll, I, Kachalova, G, Vassylyev, D, Yokoyama, S, Garber, M, Nikonov, S.V, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-07-16 | Release date: | 2005-01-25 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Structure of Pseudomonas aeruginosa Hfq protein. Acta Crystallogr.,Sect.D, 61, 2005
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5DY9
| Y68T Hfq from Methanococcus jannaschii in complex with AMP | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... | Authors: | Nikulin, A.D, Mikhailina, A.O, Lekontseva, N.V, Balobanov, V.A, Nikonova, E.Y, Tishchenko, S.V. | Deposit date: | 2015-09-24 | Release date: | 2016-09-28 | Last modified: | 2017-05-24 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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1DK1
| DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX | Descriptor: | 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ... | Authors: | Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N. | Deposit date: | 1999-12-06 | Release date: | 2000-04-02 | Last modified: | 2021-11-03 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of the S15-rRNA complex. Nat.Struct.Biol., 7, 2000
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5MKN
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2RFV
| High resolution structure of L-methionine gamma-lyase from Citrobacter freundii | Descriptor: | CHLORIDE ION, Methionine gamma-lyase | Authors: | Nikulin, A.D, Revtovich, S.V, Morozova, E.A, Nevskaya, N.A, Nikonov, S.V, Garber, M.B, Demidkina, T.V. | Deposit date: | 2007-10-02 | Release date: | 2008-08-19 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.355 Å) | Cite: | High-resolution structure of methionine gamma-lyase from Citrobacter freundii. Acta Crystallogr.,Sect.D, 64, 2008
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4J6W
| Crystal structure of HFQ from Pseudomonas aeruginosa in complex with CTP | Descriptor: | CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, ... | Authors: | Nikulin, A.D, Murina, V, Lekontseva, N. | Deposit date: | 2013-02-12 | Release date: | 2013-07-31 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Hfq binds ribonucleotides in three different RNA-binding sites. Acta Crystallogr.,Sect.D, 69, 2013
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4J6X
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4J6Y
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1BXE
| RIBOSOMAL PROTEIN L22 FROM THERMUS THERMOPHILUS | Descriptor: | CHLORIDE ION, PROTEIN (RIBOSOMAL PROTEIN L22) | Authors: | Unge, J, Aberg, A, Al-Karadaghi, S, Nikulin, A, Nikonov, S, Davydova, N, Nevskaya, N, Garber, M, Liljas, A. | Deposit date: | 1998-10-02 | Release date: | 1998-10-07 | Last modified: | 2018-03-14 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | The crystal structure of ribosomal protein L22 from Thermus thermophilus: insights into the mechanism of erythromycin resistance. Structure, 6, 1998
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6EGR
| Crystal structure of Citrobacter freundii methionine gamma-lyase with V358Y replacement | Descriptor: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE, ... | Authors: | Revtovich, S.V, Demitri, N, Raboni, S, Nikulin, A.D, Morozova, E.A, Demidkina, T.V, Storici, P, Mozzarelli, A. | Deposit date: | 2017-09-12 | Release date: | 2018-10-10 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Engineering methionine gamma-lyase from Citrobacter freundii for anticancer activity. Biochim Biophys Acta Proteins Proteom, 1866, 2018
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5K30
| Crystal structure of methionine gamma-lyase from Citrobacter freundii modified by S-Ethyl-L-cysteine sulfoxide | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2016-05-19 | Release date: | 2017-07-12 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.59 Å) | Cite: | Sulfoxides of sulfur-containing amino acids are suicide substrates of Citrobacter freundii methionine gamma-lyase. Structural bases of the enzyme inactivation. Biochimie, 168, 2020
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6S0C
| Crystal structure of methionine gamma-lyase from Citrobacter freundii modified by dimethylthiosulfinate | Descriptor: | Cystathionine gamma-synthase, PYRIDOXAL-5'-PHOSPHATE, TRIETHYLENE GLYCOL | Authors: | Revtovich, S.V, Morozova, E.A, Nikulin, A.D, Demidkina, T.V. | Deposit date: | 2019-06-14 | Release date: | 2020-04-22 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.46 Å) | Cite: | Sulfoxides of sulfur-containing amino acids are suicide substrates of Citrobacter freundii methionine gamma-lyase. Structural bases of the enzyme inactivation. Biochimie, 168, 2020
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1ZHO
| The structure of a ribosomal protein L1 in complex with mRNA | Descriptor: | 50S ribosomal protein L1, POTASSIUM ION, mRNA | Authors: | Nevskaya, N, Tishchenko, S, Volchkov, S, Kljashtorny, V, Nikonova, E, Nikonov, O, Nikulin, A, Kohrer, C, Piendl, W, Zimmermann, R, Stockley, P, Garber, M, Nikonov, S. | Deposit date: | 2005-04-26 | Release date: | 2006-05-09 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | New insights into the interaction of ribosomal protein L1 with RNA. J.Mol.Biol., 355, 2006
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