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PDB: 6 results

6YY4
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Parallel 17-mer DNA G-quadruplex
Descriptor: DNA (5'-D(*GP*GP*GP*TP*GP*GP*GP*AP*AP*GP*GP*GP*TP*GP*GP*GP*A)-3')
Authors:Srb, P, Curtis, C, Veverka, V.
Deposit date:2020-05-04
Release date:2021-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Overlapping but distinct: a new model for G-quadruplex biochemical specificity.
Nucleic Acids Res., 49, 2021
8R6T
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NMR solution structure of thyropin IrThy-Cd from the hard tick Ixodes ricinus
Descriptor: Putative two thyropin protein (Fragment)
Authors:Srb, P, Veverka, V, Matouskova, Z, Orsaghova, K, Mares, M.
Deposit date:2023-11-23
Release date:2024-02-28
Last modified:2024-03-06
Method:SOLUTION NMR
Cite:An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans.
Int J Mol Sci, 25, 2024
7OMK
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The NMR structure of the Zf-GRF domains from the mouse Endonuclease VIII-LIKE 3 (mNEIL3)
Descriptor: Endonuclease 8-like 3
Authors:Dinesh, D.C, Huskova, A, Srb, P, Veverka, V, Silhan, J.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Model of abasic site DNA cross-link repair; from the architecture of NEIL3 DNA binding domains to the X-structure model.
Nucleic Acids Res., 50, 2022
2F76
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Solution structure of the M-PMV wild type matrix protein (p10)
Descriptor: Core protein p10
Authors:Vlach, J, Lipov, J, Veverka, V, Lang, J, Srb, P, Rumlova, M, Hunter, E, Ruml, T, Hrabal, R.
Deposit date:2005-11-30
Release date:2006-12-05
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2F77
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Solution structure of the R55F mutant of M-PMV matrix protein (p10)
Descriptor: Core protein p10
Authors:Vlach, J, Lipov, J, Veverka, V, Lang, J, Srb, P, Rumlova, M, Hunter, E, Ruml, T, Hrabal, R.
Deposit date:2005-11-30
Release date:2006-12-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein.
Proc.Natl.Acad.Sci.USA, 105, 2008
6FVC
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Protein environment affects the water-tryptophan binding mode. Molecular dynamics simulations of Engrailed homeodomain mutants
Descriptor: Segmentation polarity homeobox protein engrailed
Authors:Trosanova, Z, Zachrdla, M, Jansen, S, Srb, P, Zidek, L, Kozelka, J.
Deposit date:2018-03-02
Release date:2019-04-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protein environment affects the water-tryptophan binding mode. MD, QM/MM, and NMR studies of engrailed homeodomain mutants.
Phys Chem Chem Phys, 20, 2018

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