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7OC9
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BU of 7oc9 by Molmil
Structure of Bdellovibrio bacteriovorus Bd0675
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Bd0675, GLYCEROL, ...
著者Lovering, A.L, Valdivia-Delgado, M.
登録日2021-04-26
公開日2021-05-05
最終更新日2021-12-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Target highlights in CASP14: Analysis of models by structure providers.
Proteins, 89, 2021
5NC5
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BU of 5nc5 by Molmil
Crystal structure of AcrBZ in complex with antibiotic puromycin
分子名称: DARPin, DECANE, DODECANE, ...
著者Du, D, Luisi, B.
登録日2017-03-03
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
5O66
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BU of 5o66 by Molmil
Asymmetric AcrABZ-TolC
分子名称: Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, ...
著者Du, D, Luisi, B.F.
登録日2017-06-05
公開日2017-06-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献An allosteric transport mechanism for the AcrAB-TolC multidrug efflux pump.
Elife, 6, 2017
4YPI
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BU of 4ypi by Molmil
Structure of Ebola virus nucleoprotein N-terminal fragment bound to a peptide derived from Ebola VP35
分子名称: Nucleoprotein, Polymerase cofactor VP35
著者Leung, D.W, Borek, D.M, Binning, J.M, Otwinowski, Z, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-03-13
公開日2015-04-08
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (3.71 Å)
主引用文献An Intrinsically Disordered Peptide from Ebola Virus VP35 Controls Viral RNA Synthesis by Modulating Nucleoprotein-RNA Interactions.
Cell Rep, 11, 2015
6AZY
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BU of 6azy by Molmil
Crystal structure of Hsp104 R328M/R757M mutant from Calcarisporiella thermophila
分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein Hsp104
著者Michalska, K, Bigelow, L, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2017-09-13
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.
Structure, 27, 2019
6BG9
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BU of 6bg9 by Molmil
HYBRID NMR/CRYO-EM STRUCTURE OF THE HIV-1 RNA DIMERIZATION SIGNAL
分子名称: RNA dimerization signal
著者Summers, M.F.
登録日2017-10-27
公開日2018-02-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9 Å), SOLUTION NMR
主引用文献Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach.
Structure, 26, 2018
6BO4
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BU of 6bo4 by Molmil
Open state structure of the full-length TRPV2 cation channel with a resolved pore turret domain
分子名称: Transient receptor potential cation channel subfamily V member 2
著者Dosey, T.L, Wang, Z.
登録日2017-11-18
公開日2018-12-05
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structures of TRPV2 in distinct conformations provide insight into role of the pore turret.
Nat.Struct.Mol.Biol., 26, 2019
6BO5
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BU of 6bo5 by Molmil
TRPV2 ion channel in partially closed state
分子名称: Transient receptor potential cation channel subfamily V member 2
著者Dosey, T.L, Wang, Z.
登録日2017-11-18
公開日2018-12-05
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of TRPV2 in distinct conformations provide insight into role of the pore turret.
Nat.Struct.Mol.Biol., 26, 2019
6D00
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BU of 6d00 by Molmil
Calcarisporiella thermophila Hsp104
分子名称: ADENOSINE-5'-DIPHOSPHATE, Calcarisporiella thermophila Hsp104
著者Zhang, K, Pintilie, G.
登録日2018-04-09
公開日2019-04-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.
Structure, 27, 2019
6PMO
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BU of 6pmo by Molmil
Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly
分子名称: IRIDIUM ION, MAGNESIUM ION, T-box riboswitch discriminator, ...
著者Li, S, Zhang, J.
登録日2019-07-02
公開日2019-11-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65703368 Å)
主引用文献Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019
4CDI
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BU of 4cdi by Molmil
Crystal structure of AcrB-AcrZ complex
分子名称: ACRIFLAVINE RESISTANCE PROTEIN B, PREDICTED PROTEIN
著者Du, D, James, N, Klimont, E, Luisi, B.F.
登録日2013-10-31
公開日2014-04-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structure of the Acrab-Tolc Multidrug Efflux Pump.
Nature, 509, 2014
4C48
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BU of 4c48 by Molmil
Crystal structure of AcrB-AcrZ complex
分子名称: ACRIFLAVINE RESISTANCE PROTEIN B, DARPIN, DODECYL-BETA-D-MALTOSIDE, ...
著者Du, D, James, N, Klimont, E, Luisi, B.F.
登録日2013-09-02
公開日2014-04-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the AcrAB-TolC multidrug efflux pump.
Nature, 509, 2014
6TYL
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BU of 6tyl by Molmil
Crystal structure of mammalian Ric-8A:Galpha(i):nanobody complex
分子名称: Guanine nucleotide-binding protein G(i) subunit alpha-1, Nanobody A, Nanobody B, ...
著者Mou, T.C, McClelland, L, Yates-Hansen, C, Sprang, S.R.
登録日2019-08-09
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the G protein chaperone and guanine nucleotide exchange factor Ric-8A bound to G alpha i1.
Nat Commun, 11, 2020
6V3F
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BU of 6v3f by Molmil
Structure of NPC1-like intracellular cholesterol transporter 1 (NPC1L1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Huang, C.S, Yu, X, Min, X, Wang, Z.
登録日2019-11-25
公開日2020-07-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures of NPC1L1 reveal mechanisms of cholesterol transport and ezetimibe inhibition
Sci Adv, 6, 2020
6V4J
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BU of 6v4j by Molmil
Structure of TrkH-TrkA in complex with ATP
分子名称: Potassium uptake protein TrkA, Trk system potassium uptake protein TrkH
著者Zhou, M, Zhang, H.
登録日2019-11-27
公開日2020-02-12
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献TrkA undergoes a tetramer-to-dimer conversion to open TrkH which enables changes in membrane potential.
Nat Commun, 11, 2020
6V4L
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BU of 6v4l by Molmil
Structure of TrkH-TrkA in complex with ATPgammaS
分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Potassium uptake protein TrkA, Trk system potassium uptake protein TrkH
著者Zhou, M, Zhang, H.
登録日2019-11-27
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献TrkA undergoes a tetramer-to-dimer conversion to open TrkH which enables changes in membrane potential.
Nat Commun, 11, 2020
6V3H
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BU of 6v3h by Molmil
Structure of NPC1-like intracellular cholesterol transporter 1 (NPC1L1) in complex with an ezetimibe analog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(2S,3R)-3-[(3S)-3-(4-fluorophenyl)-3-hydroxypropyl]-1-(4-{3-[(methylsulfonyl)amino]prop-1-yn-1-yl}phenyl)-4-oxoazetidin-2-yl]phenyl beta-D-glucopyranosiduronic acid, ...
著者Huang, C.S, Yu, X, Min, X, Wang, Z.
登録日2019-11-25
公開日2020-07-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures of NPC1L1 reveal mechanisms of cholesterol transport and ezetimibe inhibition
Sci Adv, 6, 2020
6V4K
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BU of 6v4k by Molmil
Structure of TrkH-TrkA in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Potassium transporter peripheral membrane component, Trk system potassium uptake protein
著者Zhou, M, Zhang, H.
登録日2019-11-27
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.53004146 Å)
主引用文献TrkA undergoes a tetramer-to-dimer conversion to open TrkH which enables changes in membrane potential.
Nat Commun, 11, 2020
8U2C
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BU of 8u2c by Molmil
Gaussian mixture model based single particle refinement - ABC transporter (inhibitor-bound ABCG2 from EMPIAR-10374)
分子名称: 5D3 Fab heavy chain variable domain, 5D3 Fab light chain variable domain, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U28
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BU of 8u28 by Molmil
Gaussian mixture model based single particle refinement - SARS (SARS-CoV-2 Spike Proteins on intact virions from EMPIAR-10492)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
8U26
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BU of 8u26 by Molmil
Gaussian Mixture Models based single particle refinement - GPCR (Substance P bound to active human neurokinin 1 receptor in complex with miniGs399 from EMPIAR-10786)
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Chen, M, Pintilie, G.
登録日2023-09-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models.
Nat.Methods, 21, 2024
4NWW
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BU of 4nww by Molmil
Crystal structure of an N-terminally truncated capsid protein mutant of Orsay virus
分子名称: CALCIUM ION, Capsid protein
著者Tao, Y.J, Guo, Y.R.
登録日2013-12-06
公開日2014-08-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Crystal structure of a nematode-infecting virus.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NWV
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BU of 4nwv by Molmil
Crystal structure of Orsay virus-like particle
分子名称: CALCIUM ION, Capsid protein
著者Tao, Y.J, Guo, Y.R.
登録日2013-12-06
公開日2014-08-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Crystal structure of a nematode-infecting virus.
Proc.Natl.Acad.Sci.USA, 111, 2014
6VLK
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BU of 6vlk by Molmil
A varicella-zoster virus glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, ...
著者Xing, Y.
登録日2020-01-24
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4529 Å)
主引用文献A glycoprotein B-neutralizing antibody structure at 2.8 angstrom uncovers a critical domain for herpesvirus fusion initiation.
Nat Commun, 11, 2020
6VN1
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BU of 6vn1 by Molmil
A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation
分子名称: Envelope glycoprotein B, Human monoclonal antibody 93k variable heavy chain, Human monoclonal antibody 93k variable light chain
著者Oliver, S.L.
登録日2020-01-29
公開日2020-07-15
最終更新日2020-09-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献A glycoprotein B-neutralizing antibody structure at 2.8 angstrom uncovers a critical domain for herpesvirus fusion initiation.
Nat Commun, 11, 2020

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