Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HNH
DownloadVisualize
BU of 8hnh by Molmil
Cryo-EM structure of human OATP1B1 in complex with simeprevir
分子名称: (2R,3aR,10Z,11aS,12aR,14aR)-N-(cyclopropylsulfonyl)-2-({7-methoxy-8-methyl-2-[4-(1-methylethyl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-4,14-dioxo-2,3,3a,4,5,6,7,8,9,11a,12,13,14,14a-tetradecahydrocyclopenta[c]cyclopropa[g][1,6]diazacyclotetradecine-12a(1H)-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Shan, Z, Yang, X, Zhang, Y.
登録日2022-12-07
公開日2023-09-13
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
8XOR
DownloadVisualize
BU of 8xor by Molmil
Cryo-EM structure of the tethered agonist-bound human PAR1-Gq complex
分子名称: CHOLESTEROL, G subunit q (Gi1-Gq chimeric), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Guo, J, Zhang, Y.
登録日2024-01-02
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of tethered agonism and G protein coupling of protease-activated receptors.
Cell Res., 2024
8HND
DownloadVisualize
BU of 8hnd by Molmil
Cryo-EM structure of human OATP1B1 in complex with estrone-3-sulfate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier organic anion transporter family member 1B1, ...
著者Shan, Z, Yang, X, Liu, H, Nan, J, Yuan, Y, Zhang, Y.
登録日2022-12-07
公開日2023-09-13
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
8XOS
DownloadVisualize
BU of 8xos by Molmil
Cryo-EM structure of the tethered agonist-bound human PAR1-Gi complex
分子名称: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Guo, J, Zhang, Y.
登録日2024-01-02
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of tethered agonism and G protein coupling of protease-activated receptors.
Cell Res., 2024
8IFG
DownloadVisualize
BU of 8ifg by Molmil
Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe
分子名称: Chromatin modification-related protein eaf3, Cph1, Cph2, ...
著者Zhang, H.Q, Wang, X, Wang, Y.N, Liu, S.M, Zhang, Y, Xu, K, Ji, L.T, Kornberg, R.D.
登録日2023-02-17
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Class I histone deacetylase complex: Structure and functional correlates.
Proc Natl Acad Sci U S A, 120, 2023
8ID7
DownloadVisualize
BU of 8id7 by Molmil
Crystal structure of YbiW in complex with 1,5-anhydroglucitol-6-phosphate in Escherichia coli
分子名称: 1,5-anhydro-6-O-phosphono-D-glucitol, Probable dehydratase YbiW
著者Ma, K.L, Zhang, Y.
登録日2023-02-12
公開日2024-10-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 146, 2024
8ID0
DownloadVisualize
BU of 8id0 by Molmil
Crystal structure of PflD bound to 1,5-anhydromannitol-6-phosphate in Streptococcus dysgalactiae subsp. equisimilis
分子名称: [(2R,3S,4R,5R)-3,4,5-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate, formate C-acetyltransferase
著者Ma, K.L, Zhang, Y.
登録日2023-02-11
公開日2024-10-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 146, 2024
5EZ6
DownloadVisualize
BU of 5ez6 by Molmil
Crystallization and preliminary X-ray crystallographic analysis of a small GTPase RhoA
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
著者Yan, Z, Ma, S, Zhang, Y, Ma, L, Wang, F, Li, J, Miao, L.
登録日2015-11-26
公開日2016-12-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallization and preliminary X-ray crystallographic analysis of a small GTPase RhoA
To Be Published
7V1U
DownloadVisualize
BU of 7v1u by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor ZJ12
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-(3-ethyl-6-methoxy-1,2-benzoxazol-5-yl)-2-methoxy-benzenesulfonamide
著者Zhang, M, Wang, C, Zhang, C, Zhang, Y, Xu, Y.
登録日2021-08-06
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Design, synthesis and pharmacological characterization of N-(3-ethylbenzo[d]isoxazol-5-yl) sulfonamide derivatives as BRD4 inhibitors against acute myeloid leukemia.
Acta Pharmacol.Sin., 43, 2022
7V2J
DownloadVisualize
BU of 7v2j by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor 33
分子名称: Bromodomain-containing protein 4, ~{N}-(3-ethyl-6-methoxy-1,2-benzoxazol-5-yl)-4-methoxy-benzenesulfonamide
著者Zhang, M, Wang, C, Zhang, C, Zhang, Y, Xu, Y.
登録日2021-08-09
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Design, synthesis and pharmacological characterization of N-(3-ethylbenzo[d]isoxazol-5-yl) sulfonamide derivatives as BRD4 inhibitors against acute myeloid leukemia.
Acta Pharmacol.Sin., 43, 2022
8UYO
DownloadVisualize
BU of 8uyo by Molmil
Structure of a recombinant human PNMA2 capsid
分子名称: Paraneoplastic antigen Ma2
著者Wilkinson, M.E, Madigan, V, Zhang, Y, Zhang, F.
登録日2023-11-13
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Human paraneoplastic antigen Ma2 (PNMA2) forms icosahedral capsids that can be engineered for mRNA delivery.
Proc.Natl.Acad.Sci.USA, 121, 2024
2NNW
DownloadVisualize
BU of 2nnw by Molmil
Alternative conformations of Nop56/58-fibrillarin complex and implication for induced-fit assenly of box C/D RNPs
分子名称: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, NOP5/NOP56 related protein
著者Oruganti, S, Zhang, Y, Terns, R, Terns, M.P, Li, H.
登録日2006-10-24
公開日2007-08-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Alternative Conformations of the Archaeal Nop56/58-Fibrillarin Complex Imply Flexibility in Box C/D RNPs.
J.Mol.Biol., 371, 2007
8ID1
DownloadVisualize
BU of 8id1 by Molmil
Crystal structure of N-Methyl-cis-4-hydroxy-L-proline dehydratase in Intestinibacter bartlettii
分子名称: (2S,4S)-1-methyl-4-oxidanyl-pyrrolidine-2-carboxylic acid, Formate C-acetyltransferase
著者Jiang, L, Zhang, Y.
登録日2023-02-11
公開日2024-03-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.115 Å)
主引用文献Glycyl Radical Enzymes Catalyzing the Dehydration of Two Isomers of N-Methyl-4-hydroxyproline
Acs Catalysis, 14, 2024
8IOF
DownloadVisualize
BU of 8iof by Molmil
Crystal structure of N-methyl-Cis-4-hydroxy-D-proline dehydratase in Clostridium sp. FS41
分子名称: (2R,4R)-1-methyl-4-hydroxyl-pyrrolidine-2-carboxylic acid, Benzylsuccinate synthase alpha subunit
著者Jiang, L, Zhang, Y.
登録日2023-03-11
公開日2024-03-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Glycyl Radical Enzymes Catalyzing the Dehydration of Two Isomers of N-Methyl-4-hydroxyproline
Acs Catalysis, 14, 2024
5H3D
DownloadVisualize
BU of 5h3d by Molmil
Helical structure of membrane tubules decorated by ACAP1 (BARPH doamin) protein by cryo-electron microscopy and MD simulation
分子名称: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
著者Chan, C, Pang, X.Y, Zhang, Y, Sun, F, Fan, J.
登録日2016-10-22
公開日2019-01-16
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献ACAP1 assembles into an unusual protein lattice for membrane deformation through multiple stages.
Plos Comput.Biol., 15, 2019
2L9S
DownloadVisualize
BU of 2l9s by Molmil
Solution structure of Pf1 SID1-mSin3A PAH2 Complex
分子名称: PHD finger protein 12, Paired amphipathic helix protein Sin3a
著者Senthil Kumar, G, Xie, T, Zhang, Y, Radhakrishnan, I.
登録日2011-02-23
公開日2011-05-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the mSin3A PAH2-Pf1 SID1 Complex: A Mad1/Mxd1-Like Interaction Disrupted by MRG15 in the Rpd3S/Sin3S Complex.
J.Mol.Biol., 408, 2011
2N1D
DownloadVisualize
BU of 2n1d by Molmil
Solution structure of the MRG15-MRGBP complex
分子名称: MRG/MORF4L-binding protein, Mortality factor 4-like protein 1
著者Xie, T, Zmysloski, A.M, Zhang, Y, Radhakrishnan, I.
登録日2015-03-27
公開日2015-05-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for Multi-specificity of MRG Domains.
Structure, 23, 2015
7V9M
DownloadVisualize
BU of 7v9m by Molmil
Cryo-EM structure of the GHRH-bound human GHRHR splice variant 1 complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Cong, Z.T, Zhou, F.L, Zhang, C, Zou, X.Y, Zhang, H.B, Wang, Y.Z, Zhou, Q.T, Cai, X.Q, Liu, Q.F, Li, J, Shao, L.J, Mao, C.Y, Wang, X, Wu, J.H, Xia, T, Zhao, L.H, Jiang, H.L, Zhang, Y, Xu, H.E, Chen, X, Yang, D.H, Wang, M.W.
登録日2021-08-26
公開日2021-10-20
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Constitutive signal bias mediated by the human GHRHR splice variant 1.
Proc.Natl.Acad.Sci.USA, 118, 2021
6LK8
DownloadVisualize
BU of 6lk8 by Molmil
Structure of Xenopus laevis Cytoplasmic Ring subunit.
分子名称: GATOR complex protein SEC13, MGC154553 protein, MGC83295 protein, ...
著者Shi, Y, Huang, G, Yan, C, Zhang, Y.
登録日2019-12-18
公開日2021-07-21
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Structure of the cytoplasmic ring of the Xenopus laevis nuclear pore complex by cryo-electron microscopy single particle analysis.
Cell Res., 30, 2020
7V1N
DownloadVisualize
BU of 7v1n by Molmil
Structure of the Clade 2 C. difficile TcdB in complex with its receptor TFPI
分子名称: Isoform Beta of Tissue factor pathway inhibitor, Toxin B
著者Luo, J, Yang, Q, Zhang, X, Zhang, Y, Wan, L, Li, Y, Tao, L.
登録日2021-08-05
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献TFPI is a colonic crypt receptor for TcdB from hypervirulent clade 2 C. difficile.
Cell, 185, 2022
7WDL
DownloadVisualize
BU of 7wdl by Molmil
Fungal immunomodulatory protein FIP-nha
分子名称: Fungal immunomodulatory protein
著者Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
登録日2021-12-22
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties.
Int.J.Biol.Macromol., 213, 2022
6ND7
DownloadVisualize
BU of 6nd7 by Molmil
The crystal structure of TerB co-crystallized with polyporic acid
分子名称: 2~3~,2~6~-dihydroxy[1~1~,2~1~:2~4~,3~1~-terphenyl]-2~2~,2~5~-dione, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
登録日2018-12-13
公開日2019-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published
7WL4
DownloadVisualize
BU of 7wl4 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor SLP-50
分子名称: Bromodomain-containing protein 4, ~{N}-[2-ethyl-6-(4-methylpiperazin-1-yl)-3-oxidanylidene-2,7-diazatricyclo[6.3.1.0^{4,12}]dodeca-1(12),4,6,8,10-pentaen-9-yl]-2,4-bis(fluoranyl)benzenesulfonamide
著者Zhang, C, Wang, C, Li, W, Zhang, Y, Xu, Y, Sun, L.
登録日2022-01-12
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Design, synthesis, and anticancer evaluation of ammosamide B with pyrroloquinoline derivatives as novel BRD4 inhibitors.
Bioorg.Chem., 127, 2022
8YJN
DownloadVisualize
BU of 8yjn by Molmil
Structure of E. coli glycyl radical enzyme YbiW with bound glycerol
分子名称: GLYCEROL, Probable dehydratase YbiW
著者Xue, B, Wei, Y, Robinson, R.C, Yew, W.S, Zhang, Y.
登録日2024-03-02
公開日2024-10-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 146, 2024
8YJO
DownloadVisualize
BU of 8yjo by Molmil
Structure of E. coli glycyl radical enzyme PflD with bound malonate
分子名称: MALONATE ION, Probable dehydratase PflD
著者Xue, B, Wei, Y, Robinson, R.C, Yew, W.S, Zhang, Y.
登録日2024-03-02
公開日2024-10-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 146, 2024

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon