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6BY7
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BU of 6by7 by Molmil
Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins
Descriptor: DNA (26-MER), DNA (27-MER), DNA (29-MER), ...
Authors:Dong, Y, Chen, S, Zhang, S, Sodroski, J, Yang, Z, Liu, D, Mao, Y.
Deposit date:2017-12-20
Release date:2018-02-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Folding DNA into a Lipid-Conjugated Nanobarrel for Controlled Reconstitution of Membrane Proteins.
Angew. Chem. Int. Ed. Engl., 57, 2018
8IGN
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BU of 8ign by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with RAY1216
Descriptor: (3~{S},3~{a}~{S},6~{a}~{R})-2-[(2~{S})-2-cyclohexyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]ethanoyl]-~{N}-[(2~{S})-4-(cyclopentylamino)-3,4-bis(oxidanylidene)-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamide, 3C-like proteinase nsp5
Authors:Huang, X, Zhou, B, Xu, J, Yang, Z, Zhong, N, Xiong, X.
Deposit date:2023-02-21
Release date:2023-04-05
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Preclinical evaluation of the SARS-CoV-2 M pro inhibitor RAY1216 shows improved pharmacokinetics compared with nirmatrelvir.
Nat Microbiol, 9, 2024
8IGO
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BU of 8igo by Molmil
Crystal structure of apo SARS-CoV-2 main protease
Descriptor: 3C-like proteinase nsp5
Authors:Huang, X, Zhou, B, Xu, J, Yang, Z, Zhong, N, Xiong, X.
Deposit date:2023-02-21
Release date:2023-04-05
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Preclinical evaluation of the SARS-CoV-2 M pro inhibitor RAY1216 shows improved pharmacokinetics compared with nirmatrelvir.
Nat Microbiol, 9, 2024
7EER
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BU of 7eer by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with 05E6 and ATP
Descriptor: 2-(1H-indol-3-yl)ethanol, ADENOSINE-5'-TRIPHOSPHATE, Tryptophan--tRNA ligase
Authors:Lv, G, Fan, S, Feng, X, Zhang, Q, Wu, G, Jin, Y, Yang, Z.
Deposit date:2021-03-19
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with O5E6 and ATP
To Be Published
8JH5
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BU of 8jh5 by Molmil
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the Naproxen-bound state
Descriptor: (2S)-2-(6-methoxynaphthalen-2-yl)propanoic acid, Auxin efflux carrier component 1, nanobody
Authors:Sun, L, Liu, X, Yang, Z, Xia, J.
Deposit date:2023-05-22
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the Naproxen-bound state
To be published
7UW2
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BU of 7uw2 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB116 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-8-{3-[(2S)-butan-2-yl]-2-(3-methylbutyl)cyclohex-2-en-1-ylidene}-3,7-dimethylocta-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
7UW4
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BU of 7uw4 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB113 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-3,7-dimethyl-8-[2-(3-methylbutyl)-3-propylcyclohex-2-en-1-ylidene]octa-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
7VF4
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BU of 7vf4 by Molmil
Crystal structure of Vps75 from Candida albicans
Descriptor: CHLORIDE ION, SODIUM ION, Vps75
Authors:Wang, W, Chen, X, Yang, Z, Chen, X, Li, C, Wang, M.
Deposit date:2021-09-10
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of histone chaperone Vps75 from Candida albicans.
Biochem.Biophys.Res.Commun., 578, 2021
7W82
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BU of 7w82 by Molmil
Crystal structure of maize RDR2
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W88
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BU of 7w88 by Molmil
CryoEM structure of open form ZmRDR2 at 3.5 Angstroms resolution
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W84
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BU of 7w84 by Molmil
CryoEM structure of apo form ZmRDR2 at 3.4 Angstroms resolution
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
6KYX
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BU of 6kyx by Molmil
Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain with His tag cleaved
Descriptor: DNA-binding response regulator ArlR
Authors:Wen, Y, Ouyang, Z.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.0048 Å)
Cite:Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain
To Be Published
1XTE
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BU of 1xte by Molmil
crystal structure of CISK-PX domain
Descriptor: Serine/threonine-protein kinase Sgk3
Authors:Xing, Y, Liu, D, Zhang, R, Joachimiak, A, Songyang, Z, Xu, W.
Deposit date:2004-10-21
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX)
J.Biol.Chem., 279, 2004
1XTN
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BU of 1xtn by Molmil
crystal structure of CISK-PX domain with sulfates
Descriptor: SULFATE ION, Serine/threonine-protein kinase Sgk3
Authors:Xing, Y, Liu, D, Zhang, R, Joachimiak, A, Songyang, Z, Xu, W.
Deposit date:2004-10-22
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX)
J.Biol.Chem., 279, 2004
5XP0
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BU of 5xp0 by Molmil
Crystal structure of master biofilm regulator CsgD regulatory domain
Descriptor: MAGNESIUM ION, Probable csgAB operon transcriptional regulatory protein
Authors:Wen, Y, Ouyang, Z.
Deposit date:2017-05-31
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of master biofilm regulator CsgD regulatory domain reveals an atypical receiver domain.
Protein Sci., 26, 2017
8H4R
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BU of 8h4r by Molmil
The Crystal Structure of CDK3 and CyclinE1 Complex with Dinaciclib from Biortus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium, G1/S-specific cyclin-E1, ...
Authors:Gui, W, Wang, F, Cheng, W, Gao, J, Huang, Y, Ouyang, Z.
Deposit date:2022-10-11
Release date:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Crystal Structure of CDK3 and CyclinE1 Complex with Dinaciclib from Biortus
To Be Published
6IJ1
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BU of 6ij1 by Molmil
Crystal structure of a protein from Actinoplanes
Descriptor: ACETATE ION, IMIDAZOLE, Prenylcyclase
Authors:Yang, Z.Z, Zhang, L.L, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-10-08
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:Crystal structure of TchmY from Actinoplanes teichomyceticus.
Acta Crystallogr.,Sect.F, 75, 2019
7RW4
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BU of 7rw4 by Molmil
Crystal structure of junctophilin-1
Descriptor: ACETATE ION, GLYCEROL, Junctophilin-1
Authors:Yang, Z, Panwar, P, Van Petegem, F.
Deposit date:2021-08-19
Release date:2022-02-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structures of the junctophilin/voltage-gated calcium channel interface reveal hot spot for cardiomyopathy mutations.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RXE
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BU of 7rxe by Molmil
Crystal structure of junctophilin-2
Descriptor: CITRATE ANION, ISOPROPYL ALCOHOL, Junctophilin-2 N-terminal fragment
Authors:Yang, Z, Panwar, P, Van Petegem, F.
Deposit date:2021-08-22
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of the junctophilin/voltage-gated calcium channel interface reveal hot spot for cardiomyopathy mutations.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RXQ
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BU of 7rxq by Molmil
Crystal structure of junctophilin-2 in complex with a CaV1.1 peptide
Descriptor: ETHANOL, Junctophilin-2 N-terminal fragment, SULFATE ION, ...
Authors:Yang, Z, Panwar, P, Van Petegem, F.
Deposit date:2021-08-23
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of the junctophilin/voltage-gated calcium channel interface reveal hot spot for cardiomyopathy mutations.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TLE
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BU of 7tle by Molmil
Crystal Structure of small molecule beta-lactone 1 covalently bound to K-Ras(G12S)
Descriptor: (3R,4R)-1-[7-(8-chloronaphthalen-1-yl)-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl]-3-hydroxypiperidine-4-carbaldehyde, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ziyang, Z, Guiley, K.Z, Shokat, K.M.
Deposit date:2022-01-18
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98716748 Å)
Cite:Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S).
Nat.Chem.Biol., 18, 2022
7TLK
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BU of 7tlk by Molmil
Crystal Structure of K-Ras(G12S)
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Ziyang, Z, Guiley, K.Z, Shokat, K.M.
Deposit date:2022-01-18
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71102226 Å)
Cite:Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S).
Nat.Chem.Biol., 18, 2022
7TLG
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BU of 7tlg by Molmil
Crystal Structure of small molecule beta-lactone 5 covalently bound to K-Ras(G12S)
Descriptor: (3R,4R)-1-[7-(8-chloronaphthalen-1-yl)-8-fluoro-2-{[(4S,7as)-tetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-4-yl]-3-hydroxypiperidine-4-carbaldehyde, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ziyang, Z, Guiley, K.Z, Shokat, K.M.
Deposit date:2022-01-18
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.80000722 Å)
Cite:Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S).
Nat.Chem.Biol., 18, 2022
7CCH
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BU of 7cch by Molmil
Acinetobacter baumannii histidine kinase AdeS
Descriptor: AdeS
Authors:Wen, Y, Felix, J.
Deposit date:2020-06-17
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS.
Iscience, 24, 2021
7CCI
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BU of 7cci by Molmil
Acinetobacter baumannii response regulator AdeR with disordered N terminus
Descriptor: AdeR, MAGNESIUM ION
Authors:Wen, Y.
Deposit date:2020-06-17
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS.
Iscience, 24, 2021

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PDB entries from 2024-08-21

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