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6OAK
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BU of 6oak by Molmil
Structure of human PARG complexed with JA2131
Descriptor: (8S)-1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]sulfanyl}-6-sulfanylidene-1,3,6,7,8,9-hexahydro-2H-purin-2-one, Poly(ADP-ribose) glycohydrolase
Authors:Brosey, C.A, Ahmed, Z, Warden, S, Tainer, J.A.
Deposit date:2019-03-16
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
8EKD
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BU of 8ekd by Molmil
Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab LLNL-199 HC, Fab LLNL-199 LC, ...
Authors:Binshtein, E, Crowe, J.E.
Deposit date:2022-09-20
Release date:2024-02-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Computationally restoring the potency of a clinical antibody against Omicron.
Nature, 629, 2024
2IQC
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BU of 2iqc by Molmil
Crystal structure of Human FancF Protein that Functions in the Assembly of a DNA Damage Signaling Complex
Descriptor: Fanconi anemia group F protein, MERCURY (II) ION
Authors:Kowal, P, Gurtan, A.M, Stuckert, P, Lehmann, C, D'Andrea, A, Ellenberger, T.E.
Deposit date:2006-10-13
Release date:2006-11-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural determinants of human FANCF protein that function in the assembly of a DNA damage signaling complex.
J.Biol.Chem., 282, 2007
6TJ4
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BU of 6tj4 by Molmil
P. falciparum essential light chain, N-terminal domain
Descriptor: PfELC
Authors:Pazicky, S, Loew, C.
Deposit date:2019-11-25
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural role of essential light chains in the apicomplexan glideosome.
Commun Biol, 3, 2020
6QTG
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BU of 6qtg by Molmil
Crystal structure of human CDK8/CYCC in complex with BI-1347
Descriptor: 2-[4-(4-isoquinolin-4-ylphenyl)pyrazol-1-yl]-~{N},~{N}-dimethyl-ethanamide, Cyclin-C, Cyclin-dependent kinase 8
Authors:Boettcher, J.
Deposit date:2019-02-25
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Selective and Potent CDK8/19 Inhibitors Enhance NK-Cell Activity and Promote Tumor Surveillance.
Mol.Cancer Ther., 19, 2020
7PCD
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BU of 7pcd by Molmil
HER2 IN COMPLEX WITH A COVALENT INHIBITOR
Descriptor: 1-[4-[4-[[3,5-bis(chloranyl)-4-([1,2,4]triazolo[1,5-a]pyridin-7-yloxy)phenyl]amino]pyrimido[5,4-d]pyrimidin-6-yl]piperazin-1-yl]-4-(3-fluoranylazetidin-1-yl)butan-1-one, Receptor tyrosine-protein kinase erbB-2
Authors:Bader, G.
Deposit date:2021-08-03
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Discovery of potent and selective HER2 inhibitors with efficacy against HER2 exon 20 insertion-driven tumors, which preserve wild-type EGFR signaling.
Nat Cancer, 3, 2022
6BA6
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BU of 6ba6 by Molmil
Solution structure of Rap1b/talin complex
Descriptor: Ras-related protein Rap-1b, Talin-1
Authors:Zhu, L, Yang, J, Qin, J.
Deposit date:2017-10-12
Release date:2017-12-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of Rap1b bound to talin reveals a pathway for triggering integrin activation.
Nat Commun, 8, 2017
6TJ3
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BU of 6tj3 by Molmil
P. falciparum essential light chain, N-terminal domain
Descriptor: PfELC
Authors:Weininger, U, Pazicky, S, Loew, C.
Deposit date:2019-11-25
Release date:2020-10-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural role of essential light chains in the apicomplexan glideosome.
Commun Biol, 3, 2020
6R3S
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BU of 6r3s by Molmil
CRYSTAL STRUCTURE OF CDK8-CycC IN COMPLEX WITH COMPOUND 1
Descriptor: 1,2-ETHANEDIOL, 6-[5-chloranyl-4-[(1~{S})-1-oxidanylethyl]pyridin-3-yl]-3,4-dihydro-2~{H}-1,8-naphthyridine-1-carboxamide, Cyclin-C, ...
Authors:Boettcher, J.
Deposit date:2019-03-21
Release date:2020-04-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Selective and Potent CDK8/19 Inhibitors Enhance NK-Cell Activity and Promote Tumor Surveillance.
Mol.Cancer Ther., 19, 2020
5F2P
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BU of 5f2p by Molmil
Crystal structure of the BRD9 bromodomain in complex with compound 3.
Descriptor: 2-(dimethylamino)-6-methyl-pyrido[4,3-d]pyrimidin-5-one, BRD9
Authors:Nar, H, Fiegen, D, Zoephel, A, Bader, G.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
5F25
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BU of 5f25 by Molmil
Crystal structure of the BRD9 bromodomain in complex with compound 4.
Descriptor: 4-(1,5-dimethyl-6-oxidanylidene-pyridin-3-yl)benzamide, BRD9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-12-01
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
5F1H
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BU of 5f1h by Molmil
Crystal structure of the BRD9 bromodamian in complex with BI-9564.
Descriptor: 4-[4-[(dimethylamino)methyl]-2,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, Bromodomain-containing protein 9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-30
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
5F1L
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BU of 5f1l by Molmil
Crystal structure of the bromodomain of BRD9 in complex with compound 9.
Descriptor: 5-[3,5-dimethoxy-4-[(3-oxidanylazetidin-1-yl)methyl]phenyl]-1,3-dimethyl-pyridin-2-one, Bromodomain-containing protein 9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-30
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
6ZN3
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BU of 6zn3 by Molmil
Plasmodium facliparum glideosome trimeric sub-complex
Descriptor: Myosin A tail domain interacting protein, Myosin essential light chain ELC, Myosin-A
Authors:Pazicky, S, Loew, C.
Deposit date:2020-07-06
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural role of essential light chains in the apicomplexan glideosome.
Commun Biol, 3, 2020
5EU1
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BU of 5eu1 by Molmil
CRYSTAL STRUCTURE OF BRD9 IN COMPLEX WITH BI-7273
Descriptor: 4-[4-[(dimethylamino)methyl]-3,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, BRD9
Authors:Bader, G, Martin, L.M, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-18
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
3MCY
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BU of 3mcy by Molmil
Crystal structure of FimH lectin domain bound to biphenyl mannoside meta-methyl ester.
Descriptor: CALCIUM ION, CHLORIDE ION, FimH, ...
Authors:Ford, B.A, Hultgren, S.J.
Deposit date:2010-03-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based drug design and optimization of mannoside bacterial FimH antagonists.
J.Med.Chem., 53, 2010
3M7N
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BU of 3m7n by Molmil
archaeoglobus fulgidus exosome with RNA bound to the active site
Descriptor: 5'-R(*C*UP*CP*CP*CP*C)-3', Probable exosome complex exonuclease 1, Probable exosome complex exonuclease 2, ...
Authors:Hartung, S, Hopfner, K.-P.
Deposit date:2010-03-16
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Quantitative analysis of processive RNA degradation by the archaeal RNA exosome
Nucleic Acids Res., 38, 2010
3M85
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BU of 3m85 by Molmil
Archaeoglobus fulgidus exosome y70a with RNA bound to the active site
Descriptor: 5'-R(*CP*UP*CP*CP*CP*C)-3', Probable exosome complex exonuclease 1, Probable exosome complex exonuclease 2, ...
Authors:Hartung, S, Hopfner, K.-P.
Deposit date:2010-03-17
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Quantitative analysis of processive RNA degradation by the archaeal RNA exosome
Nucleic Acids Res., 38, 2010
6HL7
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BU of 6hl7 by Molmil
Crystal structure of truncated aspartate transcarbamoylase from Plasmodium falciparum with mutated active site (R109A/K138A) and N-carbamoyl-L-phosphate bound
Descriptor: Aspartate transcarbamoylase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Bosch, S.S, Lunev, S, Wrenger, C, Groves, M.R.
Deposit date:2018-09-10
Release date:2018-09-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Target Validation of Aspartate Transcarbamoylase fromPlasmodium falciparumby Torin 2.
Acs Infect Dis., 6, 2020
8AG2
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BU of 8ag2 by Molmil
Crystal structure of the BPTF bromodomain in complex with BI-7190
Descriptor: 5-[3-methoxy-4-[1-(4-methylpiperazin-1-yl)cyclopropyl]phenyl]-1,3,4-trimethyl-pyridin-2-one, Nucleosome-remodeling factor subunit BPTF
Authors:Bader, G, Boettcher, J, Wolkerstorfer, B.
Deposit date:2022-07-19
Release date:2022-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.025 Å)
Cite:Discovery of a Chemical Probe to Study Implications of BPTF Bromodomain Inhibition in Cellular and in vivo Experiments.
Chemmedchem, 18, 2023
7Z6L
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BU of 7z6l by Molmil
Crystal structure of PROTAC 5 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Descriptor: (2~{S},4~{R})-~{N}-[[2-[3-[4-(4-bromanyl-7-cyclopentyl-5-oxidanylidene-benzimidazolo[1,2-a]quinazolin-9-yl)piperidin-1-yl]propoxy]-4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Roy, M.J, Bader, G, Farnaby, W, Ciulli, A.
Deposit date:2022-03-12
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo.
Nat Commun, 13, 2022
7Z77
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BU of 7z77 by Molmil
Crystal structure of compound 6 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Descriptor: (2~{S},4~{R})-~{N}-[(1~{S})-4-[4-(4-bromanyl-7-cyclopentyl-5-oxidanylidene-benzimidazolo[1,2-a]quinazolin-9-yl)piperidin-1-yl]-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]butyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Bader, G, Boettcher, J, Wolkerstorfer, B.
Deposit date:2022-03-15
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo.
Nat Commun, 13, 2022
7Z76
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BU of 7z76 by Molmil
Crystal structure of compound 10 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Descriptor: (2~{S},4~{R})-~{N}-[(1~{R})-2-[(2~{R})-1-[4-(4-bromanyl-7-cyclopentyl-5-oxidanylidene-benzimidazolo[1,2-a]quinazolin-9-yl)piperidin-1-yl]propan-2-yl]oxy-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-1-[(2~{S})-2-[[1-(dimethylamino)cyclopropyl]carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Bader, G, Boettcher, J, Wolkerstorfer, B.
Deposit date:2022-03-15
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo.
Nat Commun, 13, 2022
7Z78
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BU of 7z78 by Molmil
Crystal structure of compound 4 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Descriptor: 4-bromanyl-7-cyclopentyl-9-piperidin-4-yl-benzimidazolo[1,2-a]quinazolin-5-one, Probable global transcription activator SNF2L2, ZINC ION
Authors:Bader, G, Boettcher, J, Wolkerstorfer, B.
Deposit date:2022-03-15
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo.
Nat Commun, 13, 2022
8AHC
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BU of 8ahc by Molmil
Crystal structure of the BRD9 bromodomain with BI-7189
Descriptor: Bromodomain-containing protein 9, [2,6-dimethoxy-4-(1,2,5-trimethyl-6-oxidanylidene-pyridin-3-yl)phenyl]methyl-dimethyl-azanium
Authors:Bader, G, Boettcher, J, Weiss-Puxbaum, A.
Deposit date:2022-07-21
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Discovery of a Chemical Probe to Study Implications of BPTF Bromodomain Inhibition in Cellular and in vivo Experiments.
Chemmedchem, 18, 2023

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