Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8XD7
DownloadVisualize
BU of 8xd7 by Molmil
Cryo-EM structure of inhibitor 25a bound human urea transporter A2.
Descriptor: N-(4-acetamidophenyl)-5-ethanoyl-furan-2-carboxamide, Urea transporter 2
Authors:Huang, S, Liu, L, Sun, J.
Deposit date:2023-12-10
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters.
Nat Commun, 15, 2024
8XDF
DownloadVisualize
BU of 8xdf by Molmil
Cryo-EM structure of human urea transporter B.
Descriptor: Urea transporter
Authors:Huang, S, Liu, L, Sun, J.
Deposit date:2023-12-10
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters.
Nat Commun, 15, 2024
8XDC
DownloadVisualize
BU of 8xdc by Molmil
Cryo-EM structure of human urea transporter A2.
Descriptor: N-[3-[1,1-bis(oxidanylidene)-1,2-thiazolidin-2-yl]-4-chloranyl-phenyl]-2-methoxy-5-methyl-benzenesulfonamide, Urea transporter 2
Authors:Huang, S, Liu, L, Sun, J.
Deposit date:2023-12-10
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters.
Nat Commun, 15, 2024
8XDI
DownloadVisualize
BU of 8xdi by Molmil
Cryo-EM structure of zebrafish urea transporter.
Descriptor: N-(4-acetamidophenyl)-5-ethanoyl-furan-2-carboxamide, Urea transporter
Authors:Huang, S, Liu, L, Sun, J.
Deposit date:2023-12-11
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters.
Nat Commun, 15, 2024
9B4U
DownloadVisualize
BU of 9b4u by Molmil
Crystal structure of p110alpha-RBD covalently bound to a breaker compound BBO-10203 via Cys242
Descriptor: 1-[(4R,8R)-2-[(4M,7P)-7-[2,4-difluoro-6-(2-methoxyethoxy)phenyl]-4-(1-methyl-1H-indazol-5-yl)thieno[3,2-c]pyridin-6-yl]-4-methyl-6,7-dihydropyrazolo[1,5-a]pyrazin-5(4H)-yl]propan-1-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Czyzyk, D.J, Simanshu, D.K.
Deposit date:2024-03-21
Release date:2025-06-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:BBO-10203 inhibits tumor growth without inducing hyperglycemia by blocking RAS-PI3K alpha interaction.
Science, 2025
7SHU
DownloadVisualize
BU of 7shu by Molmil
IgE-Fc in complex with omalizumab variant C02
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy constant epsilon, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHY
DownloadVisualize
BU of 7shy by Molmil
IgE-Fc in complex with omalizumab scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SI0
DownloadVisualize
BU of 7si0 by Molmil
IgE-Fc in complex with 813
Descriptor: 813 Variable fragment Heavy chain, 813 Variable fragment Light chain, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-12
Release date:2021-12-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHT
DownloadVisualize
BU of 7sht by Molmil
Structure of a partially disrupted IgE high affinity receptor complex bound to an omalizumab variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, ...
Authors:Pennington, L.F, Jardetzky, T.S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (7.29 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHZ
DownloadVisualize
BU of 7shz by Molmil
IgE-Fc in complex with HAE
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7M8W
DownloadVisualize
BU of 7m8w by Molmil
XFEL crystal structure of the prostaglandin D2 receptor CRTH2 in complex with 15R-methyl-PGD2
Descriptor: 15R-methyl-prostaglandin D2, CITRATE ANION, Prostaglandin D2 receptor 2, ...
Authors:Shiriaeva, A, Han, G.W, Cherezov, V.
Deposit date:2021-03-30
Release date:2021-08-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Molecular basis for lipid recognition by the prostaglandin D 2 receptor CRTH2.
Proc.Natl.Acad.Sci.USA, 118, 2021
6OT0
DownloadVisualize
BU of 6ot0 by Molmil
Structure of human Smoothened-Gi complex
Descriptor: 17-[3-(3,3-DIMETHYL-OXIRANYL)-1-METHYL-PROPYL]-10,13-DIMETHYL-2,3,4,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYC LOPENTA[A]PHENANTHREN-3-OL, Fab heavy chain, Fab light chain, ...
Authors:Qi, X, Li, X.
Deposit date:2019-05-02
Release date:2019-06-12
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structure of oxysterol-bound human Smoothened coupled to a heterotrimeric Gi.
Nature, 571, 2019
6SCF
DownloadVisualize
BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2019-10-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
7WUQ
DownloadVisualize
BU of 7wuq by Molmil
Tethered peptide activation mechanism of adhesion GPCRs ADGRG2 and ADGRG4
Descriptor: Adhesion G-protein coupled receptor G2,mCherry, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Q.T, Guo, S.C, Xiao, P, Sun, J.P, Yu, X, Gou, L, Kong, L.L, Zhang, L.
Deposit date:2022-02-09
Release date:2022-04-27
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Tethered peptide activation mechanism of the adhesion GPCRs ADGRG2 and ADGRG4.
Nature, 604, 2022
8XKN
DownloadVisualize
BU of 8xkn by Molmil
Cryo-EM structure of tail tube protein
Descriptor: a protein
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-12-23
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
7XKE
DownloadVisualize
BU of 7xke by Molmil
Cryo-EM structure of DHEA-ADGRG2-FL-Gs complex
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
7XKD
DownloadVisualize
BU of 7xkd by Molmil
Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
7XKF
DownloadVisualize
BU of 7xkf by Molmil
Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex at lower state
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, Adhesion G-protein coupled receptor G2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Guo, S.C, Xiao, P, Lin, H, Sun, J.P, Yu, X.
Deposit date:2022-04-19
Release date:2022-08-10
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structures of the ADGRG2-G s complex in apo and ligand-bound forms.
Nat.Chem.Biol., 18, 2022
8K98
DownloadVisualize
BU of 8k98 by Molmil
Cryo-EM structure of DSR2-TTP
Descriptor: a protein
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-07-31
Release date:2024-05-01
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
8K9A
DownloadVisualize
BU of 8k9a by Molmil
Cryo-EM structure of DSR2-DSAD1 state 2
Descriptor: SIR2-like domain-containing protein, SPbeta prophage-derived uncharacterized protein YotI
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-07-31
Release date:2024-05-01
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
7Y9V
DownloadVisualize
BU of 7y9v by Molmil
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the IAA-bound state
Descriptor: 1H-INDOL-3-YLACETIC ACID, Auxin efflux carrier component 1, nanobody
Authors:Sun, L, Liu, X, Yang, Z, Xia, J.
Deposit date:2022-06-26
Release date:2022-09-07
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into auxin recognition and efflux by Arabidopsis PIN1.
Nature, 609, 2022
7Y9U
DownloadVisualize
BU of 7y9u by Molmil
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the NPA-bound state
Descriptor: 2-(naphthalen-1-ylcarbamoyl)benzoic acid, Auxin efflux carrier component 1, nanobody
Authors:Sun, L, Liu, X, Yang, Z, Xia, J.
Deposit date:2022-06-26
Release date:2022-09-07
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into auxin recognition and efflux by Arabidopsis PIN1.
Nature, 609, 2022
7Y9T
DownloadVisualize
BU of 7y9t by Molmil
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the apo state
Descriptor: Auxin efflux carrier component 1, nanobody
Authors:Sun, L, Liu, X, Yang, Z, Xia, J.
Deposit date:2022-06-26
Release date:2022-09-07
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into auxin recognition and efflux by Arabidopsis PIN1.
Nature, 609, 2022
7VKK
DownloadVisualize
BU of 7vkk by Molmil
Crystal structure of D. melanogaster SAMTOR V66W/E67P mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, S-adenosylmethionine sensor upstream of mTORC1, SULFATE ION
Authors:Zhang, T, Ding, J.
Deposit date:2021-09-30
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Molecular mechanism of S -adenosylmethionine sensing by SAMTOR in mTORC1 signaling.
Sci Adv, 8, 2022
7VKR
DownloadVisualize
BU of 7vkr by Molmil
Crystal structure of D. melanogaster SAMTOR in complex with SAM
Descriptor: CITRIC ACID, S-ADENOSYLMETHIONINE, S-adenosylmethionine sensor upstream of mTORC1
Authors:Tang, X, Zhang, T, Ding, J.
Deposit date:2021-09-30
Release date:2022-07-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of S -adenosylmethionine sensing by SAMTOR in mTORC1 signaling.
Sci Adv, 8, 2022

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon