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7WPE
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BU of 7wpe by Molmil
SARS-CoV-2 Omicron Variant S Trimer complexed with two JMB2002 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Fab nanobody, ...
Authors:Yin, W, Xu, Y, Xu, P, Cao, X, Wu, C, Gu, C, He, X, Wang, X, Huang, S, Yuan, Q, Wu, K, Hu, W, Huang, Z, Liu, J, Wang, Z, Jia, F, Xia, K, Liu, P, Wang, X, Song, B, Zheng, J, Jiang, H, Cheng, X, Jiang, Y, Deng, S.J, Xu, H.E.
Deposit date:2022-01-23
Release date:2022-03-23
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Structures of the Omicron spike trimer with ACE2 and an anti-Omicron antibody.
Science, 375, 2022
1WD2
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BU of 1wd2 by Molmil
Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif
Descriptor: Ariadne-1 protein homolog, ZINC ION
Authors:Capili, A.D, Edghill, E.L, Wu, K, Borden, K.L.B.
Deposit date:2004-05-11
Release date:2004-07-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the C-terminal RING Finger from a RING-IBR-RING/TRIAD Motif Reveals a Novel Zinc-binding Domain Distinct from a RING
J.Mol.Biol., 340, 2004
1XT9
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BU of 1xt9 by Molmil
Crystal Structure of Den1 in complex with Nedd8
Descriptor: Neddylin, Sentrin-specific protease 8
Authors:Reverter, D, Wu, K, Erdene, T.G, Pan, Z.Q, Wilkinson, K.D, Lima, C.D.
Deposit date:2004-10-21
Release date:2004-12-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a Complex between Nedd8 and the Ulp/Senp Protease Family Member Den1.
J.Mol.Biol., 345, 2005
2L26
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BU of 2l26 by Molmil
Rv0899 from Mycobacterium tuberculosis contains two separated domains
Descriptor: Uncharacterized protein Rv0899/MT0922
Authors:Shi, C, Li, J, Gao, Y, Wu, K, Huang, H, Tian, C.
Deposit date:2010-08-12
Release date:2011-08-17
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural Studies of Mycobacterium tuberculosis Rv0899 Reveal a Monomeric Membrane-Anchoring Protein with Two Separate Domains
J.Mol.Biol., 2011
8GY7
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BU of 8gy7 by Molmil
Cryo-EM structure of ACTH-bound melanocortin-2 receptor in complex with MRAP1 and Gs protein
Descriptor: CALCIUM ION, Corticotropin, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Luo, P, Feng, W.B, Ma, S.S, Dai, A.T, Yuan, Q.N, Wu, K, Yang, D.H, Wang, M.W, Xu, H.E, Jiang, Y.
Deposit date:2022-09-21
Release date:2023-01-11
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of signaling regulation of the human melanocortin-2 receptor by MRAP1.
Cell Res., 33, 2023
5Z10
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BU of 5z10 by Molmil
Structure of the mechanosensitive Piezo1 channel
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Zhao, Q, Zhou, H, Chi, S, Wang, Y, Wang, J, Geng, J, Wu, K, Liu, W, Zhang, T, Dong, M.-Q, Wang, J, Li, X, Xiao, B.
Deposit date:2017-12-22
Release date:2018-01-31
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structure and mechanogating mechanism of the Piezo1 channel.
Nature, 554, 2018
6AGF
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BU of 6agf by Molmil
Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pan, X.J, li, Z.Q, Zhou, Q, Shen, H.Z, Wu, K, Huang, X.S, Chen, J.F, Zhang, J.R, Zhu, X.C, Lei, J.L, Xiong, W, Gong, H.P, Xiao, B.L, Yan, N.
Deposit date:2018-08-11
Release date:2018-10-10
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta 1.
Science, 362, 2018
7U6L
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BU of 7u6l by Molmil
Pseudooxynicotine amine oxidase
Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Choudhary, V, Stull, F, Wu, K.
Deposit date:2022-03-04
Release date:2022-07-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The enzyme pseudooxynicotine amine oxidase from Pseudomonas putida S16 is not an oxidase, but a dehydrogenase.
J.Biol.Chem., 298, 2022
8TQM
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BU of 8tqm by Molmil
Cryo-EM structure of E3 ubiquitin ligase Doa10 from Saccharomyces cerevisiae
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ERAD-associated E3 ubiquitin-protein ligase DOA10, ...
Authors:Park, E, Itskanov, S.I.
Deposit date:2023-08-07
Release date:2024-03-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10.
Nat Commun, 15, 2024
4GG5
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BU of 4gg5 by Molmil
Crystal structure of CMET in complex with novel inhibitor
Descriptor: 3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine, Hepatocyte growth factor receptor
Authors:Liu, Q.F, Chen, T.T, Xu, Y.C.
Deposit date:2012-08-05
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.423 Å)
Cite:Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4GG7
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BU of 4gg7 by Molmil
Crystal structure of cMET in complex with novel inhibitor
Descriptor: Hepatocyte growth factor receptor, N-(3-nitrobenzyl)-6-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-2-(trifluoromethyl)pyrido[2,3-d]pyrimidin-4-amine
Authors:Liu, Q.F, Chen, T.T, Xu, Y.C.
Deposit date:2012-08-06
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
7UDK
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BU of 7udk by Molmil
Crystal structure of designed helical repeat protein RPB_LRP2_R4 bound to LRPx4 peptide
Descriptor: 4xLRP, Designed helical repeat protein (DHR) RPB_LRP2_R4
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDJ
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BU of 7udj by Molmil
Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide
Descriptor: 4xPAW peptide, De novo designed helical repeat protein RPB_PEW3_R4
Authors:Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDL
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BU of 7udl by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 bound to PLPx6 peptide
Descriptor: 1,2-ETHANEDIOL, 6xPLP Peptide, Designed helical repeat protein (DHR) RPB_PLP1_R6
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDN
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BU of 7udn by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 2
Descriptor: Designed helical repeat protein (DHR) RPB_PLP1_R6
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UE2
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BU of 7ue2 by Molmil
Crystal structure of designed helical repeat protein RPB_PLP3_R6 bound to PLPx6 peptide
Descriptor: PLPx6 peptide, RPB_PLP3_R6
Authors:Chang, Y, Ekiert, D.C, Bhabha, G.
Deposit date:2022-03-21
Release date:2023-03-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDM
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BU of 7udm by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 1 (with peptide)
Descriptor: 6xPLP, Designed helical repeat protein (DHR) RPB_PLP1_R6
Authors:Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDO
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BU of 7udo by Molmil
Crystal structure of designed helical repeat protein RPB_LRP2_R4 (proteolysis fragment?), forming pseudopolymeric filaments
Descriptor: 1,2-ETHANEDIOL, Designed helical repeat protein (DHR) RPB_LRP2_R4, PHOSPHATE ION
Authors:Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.C.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
8WZ2
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BU of 8wz2 by Molmil
Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex
Descriptor: G-alpha q, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Jin, S, Li, X, Xu, Y, Guo, S, Wu, C, Zhang, H, Yuan, Q, Xu, H.E, Xie, X, Jiang, Y.
Deposit date:2023-11-01
Release date:2024-06-19
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Structural basis for recognition of 26RFa by the pyroglutamylated RFamide peptide receptor.
Cell Discov, 10, 2024
8GRA
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BU of 8gra by Molmil
Structure of Type VI secretion system cargo delivery vehicle Hcp-VgrG-PAAR
Descriptor: Bacterodales T6SS protein TssD (Hcp), Type VI secretion system spike protein Paar, Type VI secretion system spike protein VgrG
Authors:Wen, Y, He, W, Zhu, L.
Deposit date:2022-09-01
Release date:2023-07-12
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure and assembly of type VI secretion system cargo delivery vehicle.
Cell Rep, 42, 2023
6LQA
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BU of 6lqa by Molmil
voltage-gated sodium channel Nav1.5 with quinidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Quinidine, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Li, Z, Pan, X, Huang, G.
Deposit date:2020-01-13
Release date:2021-03-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural Basis for Pore Blockade of the Human Cardiac Sodium Channel Na v 1.5 by the Antiarrhythmic Drug Quinidine*.
Angew.Chem.Int.Ed.Engl., 60, 2021
5C5S
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BU of 5c5s by Molmil
Crystal Structure of human Myosin 9b RhoGAP domain at 2.2 angstrom
Descriptor: Unconventional myosin-IXb
Authors:Yi, F.S, Ren, J.Q, Feng, W.
Deposit date:2015-06-22
Release date:2015-11-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Myo9b is a key player in SLIT/ROBO-mediated lung tumor suppression
J.Clin.Invest., 125, 2015
7YW0
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BU of 7yw0 by Molmil
Bacteroides fragilis Hcp5
Descriptor: Bacterodales T6SS protein TssD (Hcp)
Authors:Wen, Y, He, W, Bai, Y.
Deposit date:2022-08-20
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure and assembly of type VI secretion system cargo delivery vehicle.
Cell Rep, 42, 2023
4G6H
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BU of 4g6h by Molmil
Crystal structure of NDH with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G6G
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BU of 4g6g by Molmil
Crystal structure of NDH with TRT
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, MAGNESIUM ION, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012

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PDB entries from 2024-11-20

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