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Legacy flatfile-incompatible PDB entries
8W0E
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Cryo-EM structure of a human MCM2-7 single hexamer on dsDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (25-MER), ...
Authors:Hunker, O, Yang, R, Bleichert, F.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Multiple pathways for licensing human replication origins
To Be Published
8W0F
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BU of 8w0f by Molmil
Cryo-EM structure of a human MCM2-7 double hexamer on dsDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (47-MER), ...
Authors:Hunker, O, Yang, R, Bleichert, F.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Multiple pathways for licensing human replication origins
To Be Published
8W0G
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Cryo-EM structure of a human MCM2-7 dimer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA replication licensing factor MCM2, ...
Authors:Yang, R, Hunker, O, Bleichert, F.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Multiple pathways for licensing human replication origins
To Be Published
8W0I
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Cryo-EM structure of the human MCM2-7 heterohexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA replication licensing factor MCM2, ...
Authors:Yang, R, Hunker, O, Bleichert, F.
Deposit date:2024-02-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Multiple pathways for licensing human replication origins
To Be Published
8W0R
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BU of 8w0r by Molmil
Human EBP complexed with compound 1
Descriptor: 1-methyl-1'-[(oxan-4-yl)methyl]-5-(trifluoromethyl)spiro[indole-2,4'-piperidin]-3(1H)-one, 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Authors:Sun, D, Masureel, M.
Deposit date:2024-02-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Discovery and Optimization of Selective Brain-Penetrant EBP Inhibitors that Enhance Oligodendrocyte Formation.
J.Med.Chem., 67, 2024
8W0S
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Human EBP complexed with compound 3a
Descriptor: 1-methyl-8-[(oxan-4-yl)methyl]-3-[4-(trifluoromethyl)phenyl]-1,3,8-triazaspiro[4.5]decane-2,4-dione, 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Authors:Sun, D, Masureel, M.
Deposit date:2024-02-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Discovery and Optimization of Selective Brain-Penetrant EBP Inhibitors that Enhance Oligodendrocyte Formation.
J.Med.Chem., 67, 2024
8W13
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Crystal structure of MYST acetyltransferase domain in complex with N-(1-(5-bromo-2-methoxyphenyl)-1H-1,2,3-triazol-4-yl)-2-methoxybenzenesulfonamide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Histone acetyltransferase KAT8, ...
Authors:Chen, C, Dou, Y, Wang, M, Xu, C, Buesking, A.
Deposit date:2024-02-15
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Identification of triazolyl KAT6 inhibitors via a templated fragment approach.
Bioorg.Med.Chem.Lett., 113, 2024
8W18
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The crystal structure of the Michaelis-Menten complex of a C1s/C1-INH at 3.94 Angstroms
Descriptor: Complement C1s subcomponent heavy chain, Complement C1s subcomponent light chain, Plasma protease C1 inhibitor
Authors:Garrigues, R.J, Garcia, B.L.
Deposit date:2024-02-15
Release date:2024-06-26
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:The Crystal Structure of the Michaelis-Menten Complex of C1 Esterase Inhibitor and C1s Reveals Novel Insights into Complement Regulation.
J Immunol., 213, 2024
8W1H
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BU of 8w1h by Molmil
Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PYN3 inhibitor
Descriptor: (6M)-1-[(imidazolidin-1-yl)methyl]-6-(1H-indol-3-yl)-1H-benzotriazole, PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase, ...
Authors:Geeraerts, Z, Yeh, S.-R.
Deposit date:2024-02-15
Release date:2024-08-21
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into Protein-Inhibitor Interactions in Human Tryptophan Dioxygenase.
J.Med.Chem., 67, 2024
8W1L
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BU of 8w1l by Molmil
Structure of CSF1R kinase domain in complex with Cpd 32
Descriptor: GLYCEROL, Macrophage colony-stimulating factor 1 receptor,CSF1R, SULFATE ION, ...
Authors:Kothe, M, Chodaparambil, J.
Deposit date:2024-02-16
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Identification of Selective Imidazopyridine CSF1R Inhibitors.
Acs Med.Chem.Lett., 15, 2024
8W1P
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Structure of Selenomonas sp. Cascade (SsCascade)
Descriptor: Cas5, Cas6, Cas7, ...
Authors:Hirano, S, Zhang, F.
Deposit date:2024-02-16
Release date:2024-08-07
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural determinants of DNA cleavage by a CRISPR HNH-Cascade system.
Mol.Cell, 84, 2024
8W1V
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The beta2 adrenergic receptor bound to a bitopic ligand
Descriptor: (2S)-1-[(3-{1-[4-(4-{(2S)-2-hydroxy-3-[(propan-2-yl)amino]propoxy}phenyl)butyl]-1H-1,2,3-triazol-4-yl}propyl)amino]-3-(2-propylphenoxy)propan-2-ol, Beta-2 adrenergic receptor,Endolysin, Lauryl Maltose Neopentyl Glycol, ...
Authors:Gaiser, B, Danielsen, M, Xu, X, Jorgensen, K, Fronik, P, Marcher-Rorsted, E, Wrobe, T, Hirata, K, Liu, X, Mathiesen, J, Pedersen, D.
Deposit date:2024-02-19
Release date:2024-07-17
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bitopic Ligands Support the Presence of a Metastable Binding Site at the beta 2 Adrenergic Receptor.
J.Med.Chem., 67, 2024
8W2F
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BU of 8w2f by Molmil
Plasmodium falciparum 20S proteasome bound to an inhibitor
Descriptor: (3S)-1-[(2-fluoroethoxy)acetyl]-N-{[(4P)-4-(6-methylpyridin-3-yl)-1,3-thiazol-2-yl]methyl}piperidine-3-carboxamide, Proteasome endopeptidase complex, Proteasome subunit alpha type, ...
Authors:Han, Y, Deng, X, Ray, S, Chen, Z, Phillips, M.
Deposit date:2024-02-20
Release date:2024-07-31
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Identification of potent and reversible piperidine carboxamides that are species-selective orally active proteasome inhibitors to treat malaria.
Cell Chem Biol, 31, 2024
8W2K
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BU of 8w2k by Molmil
Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PAN3F inhibitor
Descriptor: (6M)-6-(6-fluoro-1H-indol-3-yl)-1-[2-(piperazin-1-yl)ethyl]-1H-benzotriazole, PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase, ...
Authors:Geeraerts, Z, Yeh, S.-R.
Deposit date:2024-02-20
Release date:2024-08-21
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Insights into Protein-Inhibitor Interactions in Human Tryptophan Dioxygenase.
J.Med.Chem., 67, 2024
8W31
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Crystal structure of parkin (R0RB):2pUb with activator compound
Descriptor: (S)-1-(6-benzyl-3-(4-(1,2,3,4-tetrahydroquinoline-1-carbonyl)phenyl)-6,7-dihydropyrazolo[1,5-a]pyrazin-5(4H)-yl)ethan-1-one, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:Sauve, V, Gehring, K.
Deposit date:2024-02-21
Release date:2024-08-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Activation of parkin by a molecular glue.
Nat Commun, 15, 2024
8W3A
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BU of 8w3a by Molmil
Crystal structure of Shewanella benthica Group 1 truncated hemoglobin C51S C71S variant with trans heme D
Descriptor: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, {3-[(2R,5'R)-9',14'-diethenyl-5'-hydroxy-5',10',15',19'-tetramethyl-5-oxo-4,5-dihydro-3H-spiro[furan-2,4'-[21,22,23,24]tetraazapentacyclo[16.2.1.13,6.18,11.113,16]tetracosa[1,3(24),6,8,10,12,14,16(22),17,19]decaen]-20'-yl-kappa~4~N~21'~,N~22'~,N~23'~,N~24'~]propanoato}iron
Authors:Lecomte, J.T.J, Schlessman, J.L, Schultz, T.D, Siegler, M.A.
Deposit date:2024-02-22
Release date:2024-04-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Heme d formation in a Shewanella benthica hemoglobin.
J.Inorg.Biochem., 259, 2024
8W3W
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BU of 8w3w by Molmil
Crystal structure of IRAK4 in complex with compound 4
Descriptor: 7-methoxy-1-{[(2S)-5-oxopyrrolidin-2-yl]methoxy}isoquinoline-6-carboxamide, Interleukin-1 receptor-associated kinase 4
Authors:Han, S, Knafels, J.D.
Deposit date:2024-02-22
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.976 Å)
Cite:In Retrospect: Root-Cause Analysis of Structure-Activity Relationships in IRAK4 Inhibitor Zimlovisertib (PF-06650833).
Acs Med.Chem.Lett., 15, 2024
8W3X
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BU of 8w3x by Molmil
Crystal structure of IRAK4 in complex with compound 6
Descriptor: 7-ethoxy-1-{[(2S)-5-oxopyrrolidin-2-yl]methoxy}isoquinoline-6-carboxamide, Interleukin-1 receptor-associated kinase 4
Authors:Han, S, Knafels, J.D.
Deposit date:2024-02-22
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:In Retrospect: Root-Cause Analysis of Structure-Activity Relationships in IRAK4 Inhibitor Zimlovisertib (PF-06650833).
Acs Med.Chem.Lett., 15, 2024
8W6Z
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Substrate-bound crystal structure of a P450 enzyme DmlH that catalyze intramolecular phenol coupling in the biosynthesis of cihanmycins
Descriptor: (E)-3-[2-[(2R,3S)-3-[(1R)-1-aminocarbonyloxypropyl]oxiran-2-yl]phenyl]prop-2-enoic acid, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fang, C, Zhang, L, Zhu, Y, Zhang, C.
Deposit date:2023-08-30
Release date:2024-06-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate-bound crystal structure of a P450 enzyme DmlH that catalyze intramolecular phenol coupling in the biosynthesis of cihanmycins
To Be Published
8W7S
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BU of 8w7s by Molmil
Yeast replisome in state IV
Descriptor: Cell division control protein 45, DNA (71-mer), DNA polymerase alpha-binding protein, ...
Authors:Dang, S, Zhai, Y, Feng, J, Yu, D.
Deposit date:2023-08-31
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (7.39 Å)
Cite:Synergism between CMG helicase and leading strand DNA polymerase at replication fork.
Nat Commun, 14, 2023
8W8M
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Cryo-EM structure of helical filament of MyD88 TIR
Descriptor: Myeloid differentiation primary response protein MyD88
Authors:Kasai, K, Imamura, K, Narita, A, Makino, F, Miyata, T, Kato, T, Namba, K, Onishi, H, Tochio, H.
Deposit date:2023-09-04
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Signaling adopter protein in a self-assembled form
To Be Published
8W9Z
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The cryo-EM structure of the Nicotiana tabacum PEP-PAP
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta'', ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA0
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The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Descriptor: DNA (48-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA1
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The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Descriptor: DNA (24-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA2
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cryo-EM structure of native mastigonemes isolated from Chlamydomonas reinhardtii at 3.0 angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Huang, J, Tao, H, Chen, J, Pan, J, Yan, C, Yan, N.
Deposit date:2023-09-06
Release date:2024-04-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure-guided discovery of protein and glycan components in native mastigonemes.
Cell, 187, 2024

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건을2024-10-09부터공개중

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