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PDB: 12 results

1X1N
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BU of 1x1n by Molmil
Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato
Descriptor: 4-alpha-glucanotransferase, CALCIUM ION, GLYCEROL
Authors:Imamura, K, Matsuura, T, Takaha, T, Fujii, K, Nakagawa, A, Kusunoki, M, Nitta, Y.
Deposit date:2005-04-08
Release date:2006-04-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato
to be published
3VK7
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BU of 3vk7 by Molmil
Crystal structure of DNA-glycosylase bound to DNA containing 5-Hydroxyuracil
Descriptor: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(OHU)P*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*GP*TP*AP*GP*AP*CP*GP*TP*GP*GP*AP*CP*G)-3'), FORMIC ACID, ...
Authors:Imamura, K, Averill, A, Wallace, S.S, Doublie, S.
Deposit date:2011-11-10
Release date:2011-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of viral ortholog of human DNA glycosylase NEIL1 bound to thymine glycol or 5-hydroxyuracil-containing DNA
J.Biol.Chem., 287, 2012
3VK8
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Crystal structure of DNA-glycosylase bound to DNA containing Thymine glycol
Descriptor: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(CTG)P*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3'), GLYCEROL, ...
Authors:Imamura, K, Averill, A, Wallace, S.S, Doublie, S.
Deposit date:2011-11-10
Release date:2011-12-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of viral ortholog of human DNA glycosylase NEIL1 bound to thymine glycol or 5-hydroxyuracil-containing DNA
J.Biol.Chem., 287, 2012
3A45
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BU of 3a45 by Molmil
Crystal structure of MvNei1_2
Descriptor: Formamidopyrimidine-DNA glycosylase, POTASSIUM ION
Authors:Imamura, K, Wallace, S, Doublie, S.
Deposit date:2009-06-30
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Characterization of a Viral NEIL1 Ortholog Unliganded and Bound to Abasic Site-containing DNA
J.Biol.Chem., 284, 2009
3A46
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BU of 3a46 by Molmil
Crystal structure of MvNei1/THF complex
Descriptor: DNA, Formamidopyrimidine-DNA glycosylase, GLYCEROL
Authors:Imamura, K, Wallace, S, Doublie, S.
Deposit date:2009-07-01
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Characterization of a Viral NEIL1 Ortholog Unliganded and Bound to Abasic Site-containing DNA
J.Biol.Chem., 284, 2009
3A42
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Crystal structure of MvNei1
Descriptor: Formamidopyrimidine-DNA glycosylase, GLYCEROL, SULFATE ION
Authors:Imamura, K, Wallace, S, Doublie, S.
Deposit date:2009-06-30
Release date:2009-07-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Characterization of a Viral NEIL1 Ortholog Unliganded and Bound to Abasic Site-containing DNA
J.Biol.Chem., 284, 2009
7VI4
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BU of 7vi4 by Molmil
Electron crystallographic structure of TIA-1 prion-like domain, A381T mutant
Descriptor: TIA-1 prion-like domain
Authors:Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K.
Deposit date:2021-09-24
Release date:2022-09-28
Method:ELECTRON CRYSTALLOGRAPHY (0.95 Å)
Cite:ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VI5
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BU of 7vi5 by Molmil
Electron crystallographic structure of TIA-1 prion-like domain, wild type sequence
Descriptor: TIA-1 prion-like domain
Authors:Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K.
Deposit date:2021-09-24
Release date:2022-09-28
Last modified:2023-11-29
Method:ELECTRON CRYSTALLOGRAPHY (1.761 Å)
Cite:ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
6LX2
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BU of 6lx2 by Molmil
Potato D-enzyme complexed with CA26
Descriptor: 4-alpha-glucanotransferase, chloroplastic/amyloplastic, 4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-02-10
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
6LX1
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BU of 6lx1 by Molmil
Potato D-enzyme complexed with Acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-1,5-anhydro-D-glucitol, 4-alpha-glucanotransferase, chloroplastic/amyloplastic, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-02-10
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
7COV
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Potato D-enzyme, native (substrate free)
Descriptor: 4-alpha-glucanotransferase, chloroplastic/amyloplastic, CALCIUM ION, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-08-05
Release date:2020-08-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
3W0F
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BU of 3w0f by Molmil
Crystal structure of mouse Endonuclease VIII-LIKE 3 (mNEIL3)
Descriptor: Endonuclease 8-like 3, IODIDE ION, ZINC ION
Authors:Liu, M, Imamura, K, Averill, A.M, Wallace, S.S, Doublie, S.
Deposit date:2012-10-30
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of a Mouse Ortholog of Human NEIL3 with a Marked Preference for Single-Stranded DNA
Structure, 21, 2013

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