[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 126 items for (author: zhong & ed)

EMDB-70103:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70104:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70105:
Cryo-EM Non-Uniform Refinement Map of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70106:
Cryo-EM Local Refinement Map (GA3-GID1A-RGA) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70107:
Cryo-EM Local Refinement Map (SLY1-ASK1) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70510:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70511:
Cryo-EM Non-Uniform Refinement Map of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70512:
Cryo-EM Local Refinement Map (GA3-GID1A-RGA) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-70513:
Cryo-EM Local Refinement Map (SLY1-ASK1) of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9o4j:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9o4k:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

PDB-9oi8:
Cryo-EM Structure of the Arabidopsis GA3-GID1A-RGA-SLY1-ASK1 Complex (Alternative Conformation)
Method: single particle / : Dahal P, Sharma K, Borgnia M, Zhou P

EMDB-45236:
Subtomogram average (D3) of fatty acid synthase from S.cerevisiae prepared using cryo-plasmaFIB milling
Method: subtomogram averaging / : Feathers JR, Zhong ED, Khavnekar S

EMDB-49497:
Consensus map of MIDN-bound 26S proteasome, EB-state
Method: single particle / : Peddada N, Beutler B

EMDB-49498:
Locally Refined map of RP(19S) in substrate-engaged MIDN-bound 26S Proteasome, EB-MIDN state
Method: single particle / : Peddada N, Beutler B

EMDB-49499:
Locally refined map of RPN1-MIDN_alphaHelix-C
Method: single particle / : Peddada N, Beutler B

EMDB-49500:
Locally refined map of RPN11-MIDN_UBL domain
Method: single particle / : Peddada N, Beutler B

EMDB-49501:
Consensus map of 26S proteasome bound to MIDN, EB-MIDN_UBL state
Method: single particle / : Peddada N, Beutler B

EMDB-49502:
Locally refined map of RP(19S) of MIDN-bound 26S proteasome in EB-MIDN_UBL state
Method: single particle / : Peddada N, Beutler B

EMDB-49503:
Consensus map of substrate-free 26S proteasome in presence MG-132
Method: single particle / : Peddada N, Beutler B

EMDB-49504:
Focused map of RP (19S) substrate-free MIDN-free 26S proteasome, SA-like state with MG-132
Method: single particle / : Peddada N, Beutler B

EMDB-49505:
Consensus map of substrate engaged MIDN-bound 26S proteasome, ED-state
Method: single particle / : Peddada N, Beutler B

EMDB-49506:
Locally Refined map of RP(19S) in substrate-engaged MIDN-bound 26S Proteasome, ED-MIDN state
Method: single particle / : Peddada N, Beutler B

EMDB-49507:
Structure of human substrate-free 26S proteasome in the presence of ATPgS and MG-132,SA-like state (composite map)
Method: single particle / : Peddada N, Beutler B

EMDB-49508:
Structure of substrate engaged MIDN-bound human 26S proteasome, EB-MIDN (Composite map)
Method: single particle / : Peddada N, Beutler B

EMDB-49509:
Structure of substrate engaged MIDN-bound human 26S proteasome, EB MIDN_UBL state (Composite map)
Method: single particle / : Peddada N, Beutler B

EMDB-49510:
Structure of substrates-engaged MIDN-bound human 26S proteasome,ED-MIDN state (Composite map)
Method: single particle / : Peddada N, Beutler B

PDB-9nkf:
Structure of human substrate-free 26S proteasome in the presence of ATPgS and MG-132,SA-like state (composite map)
Method: single particle / : Peddada N, Beutler B

PDB-9nkg:
Structure of substrate engaged MIDN-bound human 26S proteasome, EB-MIDN (Composite map)
Method: single particle / : Peddada N, Beutler B

PDB-9nki:
Structure of substrate engaged MIDN-bound human 26S proteasome, EB MIDN_UBL state (Composite map)
Method: single particle / : Peddada N, Beutler B

PDB-9nkj:
Structure of substrates-engaged MIDN-bound human 26S proteasome,ED-MIDN state (Composite map)
Method: single particle / : Peddada N, Beutler B

EMDB-45671:
Subtomogram average of the Polar Tube Outer Filament layer from Encephalitozoon intestinalis microsporidian spores
Method: subtomogram averaging / : Usmani M, Coudray N, Bobe D, Kopylov M, Ekiert DC, Bhabha G

EMDB-45672:
Subtomogram average of the Polar Tube Inner Filament layer from Encephalitozoon intestinalis microsporidian spores
Method: subtomogram averaging / : Usmani M, Coudray N, Bobe D, Kopylov M, Ekiert DC, Bhabha G

EMDB-45673:
Subtomogram average of the Polar Tube Outer Filament Layer and Inner Filament layer from Encephalitozoon intestinalis microsporidian spores
Method: subtomogram averaging / : Usmani M, Coudray N, Bobe D, Kopylov M, Ekiert DC, Bhabha G

EMDB-45674:
Subtomogram average of a whole Polar Tube cross-section from Encephalitozoon intestinalis microsporidian spores
Method: subtomogram averaging / : Usmani M, Coudray N, Bobe D, Kopylov M, Ekiert DC, Bhabha G

EMDB-45235:
Subtomogram average (C1) of fatty acid synthase from S.cerevisiae prepared using cryo-plasmaFIB milling
Method: subtomogram averaging / : Feathers JR, Zhong ED, Khavnekar S

EMDB-43319:
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA
Method: single particle / : Li F, Zhao B

EMDB-43338:
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA and substrate analog
Method: single particle / : Li F, Zhao B

EMDB-43339:
Cryo-EM structure of human HGSNAT bound with CoA and product analog
Method: single particle / : Li F, Zhao B

EMDB-43344:
Cryo-EM structure of human HGSNAT bound with CoA
Method: single particle / : Li F, Zhao B

EMDB-43345:
Cryo-EM structure of human HGSNAT in inactive state
Method: single particle / : Li F

EMDB-43348:
Cryo-EM structure of human HGSNAT in transition state
Method: single particle / : Li F, Zhao B

PDB-8vkj:
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA
Method: single particle / : Li F, Zhao B

PDB-8vlg:
Cryo-EM structure of human HGSNAT bound with Acetyl-CoA and substrate analog
Method: single particle / : Li F, Zhao B

PDB-8vli:
Cryo-EM structure of human HGSNAT bound with CoA and product analog
Method: single particle / : Li F, Zhao B

PDB-8vlu:
Cryo-EM structure of human HGSNAT bound with CoA
Method: single particle / : Li F, Zhao B

PDB-8vlv:
Cryo-EM structure of human HGSNAT in inactive state
Method: single particle / : Li F

PDB-8vly:
Cryo-EM structure of human HGSNAT in transition state
Method: single particle / : Li F, Zhao B

EMDB-18657:
PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1
Method: single particle / : Fischer G, Peter D, Arce-Solano S

PDB-8qu8:
PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1
Method: single particle / : Fischer G, Peter D, Arce-Solano S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more