[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 318 items for (author: yan & mr)

EMDB-65894:
Cyro-EM structure of prefusion RSV fusion glycoprotein in complex with Ziresovir and motavizumab Fab
Method: single particle / : Zhang W, Yan MR, Zou JJ, Peng W

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-71643:
CryoEM structure of the YonE portal protein from Bacillus phage SPbeta
Method: single particle / : Mishra BP, Ve T

EMDB-71644:
CryoEM structure of filament of Bacillus subtilis TIR domain protein SpbK
Method: helical / : Mishra BP, Ve T

PDB-9pha:
CryoEM structure of the YonE portal protein from Bacillus phage SPbeta
Method: single particle / : Mishra BP, Ve T

PDB-9phb:
CryoEM structure of filament of Bacillus subtilis TIR domain protein SpbK
Method: helical / : Mishra BP, Ve T

EMDB-74020:
Structure of E. Coli DNA protection during starvation protein (DPS) from single particle cryoEM
Method: single particle / : Sibert BS, Parrell D, Yang JE, Kumar A, Larson MR, Montemayor EJ, Maindola P, Cai K, Wright ER

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-70808:
Structure of Fab HB420 in complex with influenza H3N2 A/Moscow/10/1999 neuraminidase
Method: single particle / : Lv H, Wu NC

EMDB-49659:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-49901:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-46727:
Structure of AG11-2F01 Fab in complex with A/Solomon Islands/3/2006 (H1N1) influenza virus hemagglutinin
Method: single particle / : Mou Z, Lei R, Dai X, Wu N

EMDB-72209:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-72215:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449; G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-45930:
Structure of 16.ND.92 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus Hemagglutinin
Method: single particle / : Ouyang WO, Pholcharee T, Wu NC

EMDB-53281:
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53282:
Single particle cryo-EM structure of MdtF V610F
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53283:
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-44435:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-50042:
Wzc-K540M-2YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50043:
Wzc-K540M-2YE MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50044:
Wzc-K540M-3YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50045:
Wzc-K540M-3YE MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50046:
Wzc-K540M-3YE-N711Y MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50047:
Wzc-K540M-3YE-N711Y MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-44061:
Artemia franciscana ATP synthase state 2 (composite structure), pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44087:
Artemia franciscana ATP synthase state 1, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44094:
Artemia franciscana ATP synthase state 3a, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44096:
Artemia franciscana ATP synthase F1 domain, state 3a, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44142:
Artemia franciscana ATP synthase state 2 (composite structure), pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44162:
Artemia franciscana ATP synthase FO domain, state 2, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44165:
Artemia franciscana ATP synthase F1 domain, state 2, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44169:
Artemia franciscana ATP synthase FO domain, state 2, pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44170:
Artemia franciscana ATP synthase F1 domain, state 2, pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44172:
Artemia franciscana ATP synthase peripheral stalk, state 2, pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44173:
Artemia franciscana ATP synthase, state 1, pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44177:
Artemia franciscana ATP synthase, state 2, FOF1 with weak density of the peripheral stalk, pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-44776:
Artemia franciscana ATP synthase FO domain, state 1, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-49579:
Artemia franciscana ATP synthase, state 2, pH 8.0, consensus map
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-49580:
Artemia franciscana ATP synthase, state 2, pH 7.0, consensus map
Method: single particle / : Mnatsakanyan N, Mello JFR

PDB-9b0x:
Artemia franciscana ATP synthase state 2 (composite structure), pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

PDB-9b3j:
Artemia franciscana ATP synthase state 2 (composite structure), pH 8.0
Method: single particle / : Mnatsakanyan N, Mello JFR

PDB-9bpg:
Artemia franciscana ATP synthase FO domain, state 1, pH 7.0
Method: single particle / : Mnatsakanyan N, Mello JFR

EMDB-61117:
Arabidopsis ATP/ADP translocator AtNTT1
Method: single particle / : Lin HJ, Huang J, Li TM, Li WJ, Su NN, Zhang JR, Wu XD, Fan MR

EMDB-61118:
ATP bound Arabidopsis ATP/ADP translocator AtNTT1
Method: single particle / : Lin HJ, Huang J, Li TM, Li WJ, Su NN, Zhang JR, Wu XD, Fan MR

EMDB-61119:
ADP/Pi bound Arabidopsis ATP/ADP translocator AtNTT1
Method: single particle / : Lin HJ, Huang J, Li TM, Li WJ, Su NN, Zhang JR, Wu XD, Fan MR

EMDB-61120:
ATP bound Chlamydia pneumoniae ATP/ADP translocator NTT1(Inward open state)
Method: single particle / : Lin HJ, Huang J, Li TM, Li WJ, Su NN, Zhang JR, Wu XD, Fan MR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more