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Showing all 41 items for (author: yamada & c)
![](data/emdb/media/33045/emdbimg.jpg)
EMDB-33045:
SARS-CoV-2 spike glycoprotein in complex with neutralizing antibody UT28K
Method: single particle / : Ozawa T, Tani H, Anraku Y, Kita S, Igarashi E, Saga Y, Inasaki N, Kawasuji H, Yamada H, Sasaki S, Someoka M, Sasaki J, Hayakawa Y, Yamamoto Y, Morinaga Y, Kurosawa N, Isobe M, Fukuhara H, Maenaka K, Hashiguchi T, Kishi H, Kitajima I, Saito S, Niimi H
![](data/emdb/media/31089/snaps2.jpg)
EMDB-31089:
Cryo-EM structure of the octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS
![](data/emdb/media/31090/snaps2.jpg)
EMDB-31090:
Cryo-EM structure of the hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS
![](data/pdb/media/7eh7/snapsdep.jpg)
PDB-7eh7:
Cryo-EM structure of the octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS
![](data/pdb/media/7eh8/snapsdep.jpg)
PDB-7eh8:
Cryo-EM structure of the hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS
![](data/emdb/media/13120/snaps2.jpg)
EMDB-13120:
Mature capsid of bacteriophage phiRSA1
Method: single particle / : Effantin G, Fujiwara A
![](data/pdb/media/7oz4/snapsdep.jpg)
PDB-7oz4:
Mature capsid of bacteriophage phiRSA1
Method: single particle / : Effantin G, Fujiwara A, Kawsaki T, Yamada T, Schoehn G
![](data/emdb/media/11179/snaps2.jpg)
EMDB-11179:
Head of Semi-jumbo phage RP13
Method: single particle / : Neumann E, Kawasaki T, Effantin G, Estrozi L, Chatchawankanphanich O, Yamada T, Schoehn G
![](data/emdb/media/11180/snaps2.jpg)
EMDB-11180:
Head reconstruction of full jumbo phage XacN1
Method: single particle / : Neumann E, Kawasaki T, Effantin G, Estrozi L, Chatchawankanphanich O, Yamada T, Schoehn G
![](data/emdb/media/0869/snaps2.jpg)
EMDB-0869:
Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions
Method: single particle / : Hattori M, Jin F
![](data/pdb/media/6lbh/snapsdep.jpg)
PDB-6lbh:
Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions
Method: single particle / : Hattori M, Jin F
![](data/emdb/media/12160/snaps2.jpg)
EMDB-12160:
Cilia from MOT7 deletion mutant of Chlamydomonas
Method: subtomogram averaging / : Noga A, Kutomi O, Yamamoto R, Nakagiri Y, Imai H, Obbineni JM, Zimmermann N, Ishikawa T, Wakabayashi K, Kon T, Inaba K
![](data/emdb/media/12161/snaps2.jpg)
EMDB-12161:
Chlamydomonas cilia with MOT7-BCCP labeled
Method: subtomogram averaging / : Noga A, Kutomi O, Yamamoto R, Nakagiri Y, Imai H, Obbineni JM, Zimmermann N, Ishikawa T, Wakabayashi K, Kon T, Inaba K
![](data/emdb/media/12162/snaps2.jpg)
EMDB-12162:
Microtubule doublet structure from WT Chlamydomonas as a control for MOT7 mutants
Method: subtomogram averaging / : Obbineni JM, Kutomi O, Yamamoto R, Nakagiri Y, Imai H, Noga A, Zimmermann N, Ishikawa T, Wakabayashi K, Kon T, Inaba K
![](data/emdb/media/11178/snaps2.jpg)
EMDB-11178:
Jumbo Bacteriophage RSL2 - Full icosahedral capsid
Method: single particle / : Neumann E, Kawasaki T, Effantin G, Estrozi L, Chatchawankanphanich O, Yamada T, Schoehn G
![](data/emdb/media/0730/snaps2.jpg)
EMDB-0730:
CryoEM map and model of Nitrite Reductase at pH 6.2
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T
![](data/emdb/media/0731/snaps2.jpg)
EMDB-0731:
CryoEM map and model of Nitrite Reductase at pH 8.1
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T
![](data/pdb/media/6knf/snapsdep.jpg)
PDB-6knf:
CryoEM map and model of Nitrite Reductase at pH 6.2
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T
![](data/pdb/media/6kng/snapsdep.jpg)
PDB-6kng:
CryoEM map and model of Nitrite Reductase at pH 8.1
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T
![](data/emdb/media/30362/snaps2.jpg)
EMDB-30362:
2.05 angstrom resolution structure determination of sulfur oxygenase reductase using 200kV cryo-EM
Method: single particle / : Moriya T, Naruhiko A, Sato Y, Arakawa T, Kawasaki M, Yamada C, Fushinobu S, Senda T
![](data/emdb/media/30073/snaps2.jpg)
EMDB-30073:
Cryo-EM structure of sulfur oxygenase reductase from Sulfurisphaera tokodaii
Method: single particle / : Sato Y, Adachi N
![](data/pdb/media/6m3x/snapsdep.jpg)
PDB-6m3x:
Cryo-EM structure of sulfur oxygenase reductase from Sulfurisphaera tokodaii
Method: single particle / : Sato Y, Adachi N, Moriya T, Arakawa T, Kawasaki M, Yamada C, Senda T, Fushinobu S
![](data/emdb/media/11049/snaps2.jpg)
EMDB-11049:
Electron cryo-tomography reconstruction and subvolume averaging of the proximal basal body triplet from Trichonympha
Method: subtomogram averaging / : Guichard P, Hachet V, Majubu N, Neves A, Demurtas D, Olieric N, Fluckiger I, Yamada A, Kihara K, Nishida Y, Moriya S, Steinmetz MO, Hongoh Y, Gonczy P
![](data/emdb/media/0728/snaps2.jpg)
EMDB-0728:
Structure of human cardiac thin filament in the calcium free state
Method: single particle / : Fujii T, Yamada Y
![](data/emdb/media/0729/snaps2.jpg)
EMDB-0729:
Structure of human cardiac thin filament in the calcium bound state
Method: single particle / : Fujii T, Yamada Y
![](data/pdb/media/6kn7/snapsdep.jpg)
PDB-6kn7:
Structure of human cardiac thin filament in the calcium free state
Method: single particle / : Fujii T, Yamada Y, Namba K
![](data/pdb/media/6kn8/snapsdep.jpg)
PDB-6kn8:
Structure of human cardiac thin filament in the calcium bound state
Method: single particle / : Fujii T, Yamada Y, Namba K
![](data/emdb/media/6102/snaps2.jpg)
EMDB-6102:
Electron cryo-microscopy of DNGR-1 in complex with F-actin
Method: single particle / : Hanc P, Fujii T, Yamada Y, Huotari J, Schulz O, Ahrens S, Kjaer S, Way M, Namba K, Reis e Sousa C
![](data/pdb/media/3j82/snapsdep.jpg)
PDB-3j82:
Electron cryo-microscopy of DNGR-1 in complex with F-actin
Method: single particle / : Hanc P, Fujii T, Yamada Y, Huotari J, Schulz O, Ahrens S, Kjaer S, Way M, Namba K, Reis e Sousa C
![](data/emdb/media/2329/snaps2.jpg)
EMDB-2329:
electron cryo-tomography reconstruction and subvolume averaging of the Trichonympha proximal basal body
Method: subtomogram averaging / : Guichard P, Hachet V, Majubu N, Neves A, Demurtas D, Olieric N, Fluckiger I, Yamada A, Kihara K, Nishida Y, Moriya S, Steinmetz MO, Hongoh Y, Gonczy P
![](data/emdb/media/2330/snaps2.jpg)
EMDB-2330:
Electron cryo-tomography reconstruction and subvolume averaging of the proximal basal body triplet from Trichonympha
Method: subtomogram averaging / : Guichard P, Hachet V, Majubu N, Neves A, Demurtas D, Olieric N, Fluckiger I, Yamada A, Kihara K, Nishida Y, Moriya S, Steinmetz MO, Hongoh Y, Gonczy P
![](data/emdb/media/2243/snaps2.jpg)
EMDB-2243:
Cryo-electron microscopy of phirsl1 jumbo phage
Method: single particle / : Effantin G, Hamasaki R, Kawasaki T, Bacia M, Moriscot C, Weissenhorn W, Yamada T, Schoehn G
![](data/emdb/media/2244/snaps2.jpg)
EMDB-2244:
Cryo-electron microscopy of phirsl1 jumbo phage
Method: helical / : Effantin G, Hamasaki R, Kawasaki T, Bacia M, Moriscot C, Weissenhorn W, Yamada T, Schoehn G
![](data/emdb/media/2245/snaps2.jpg)
EMDB-2245:
Cryo-electron microscopy of phirsl1 jumbo phage
Method: single particle / : Effantin G, Hamasaki R, Kawasaki T, Bacia M, Moriscot C, Weissenhorn W, Yamada T, Schoehn G
![](data/emdb/media/2246/snaps2.jpg)
EMDB-2246:
Cryo-electron microscopy of phirsl1 jumbo phage
Method: single particle / : Effantin G, Hamasaki R, Kawasaki T, Bacia M, Moriscot C, Weissenhorn W, Yamada T, Schoehn G
![](data/emdb/media/2247/snaps2.jpg)
EMDB-2247:
Cryo-electron microscopy of phirsl1 jumbo phage
Method: single particle / : Effantin G, Hamasaki R, Kawasaki T, Bacia M, Moriscot C, Weissenhorn W, Yamada T, Schoehn G
![](data/emdb/media/1877/snaps2.jpg)
EMDB-1877:
CryoEM structure of the chromatin remodelling factor ISW1a bound to a mononucleosome (45N29)
Method: single particle / : Frouws TD, Richmond TJ
![](data/emdb/media/1878/snaps2.jpg)
EMDB-1878:
CryoEM structure of the remodelling factor ISW1a bound to a mononucleosome (45N0)
Method: single particle / : Frouws TD, Richmond TJ
![](data/emdb/media/1637/snaps2.jpg)
EMDB-1637:
Proteome organization in a genome-reduced bacterium -Topoisomerase of Mycoplasma pneumoniae -
Method: single particle / : Kuhner S, vanNoort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castano-Diez D, Chen WH, Devos D, Guell Cargol M, Norambuena T, Racke I, Rybin V, Schmidt A, Yus E, Aebersold R, Herrmann R, Bottcher B, Frangakis AS, Russell RB, Serrano L, Bork P, Gavin AC
![](data/emdb/media/1638/snaps2.jpg)
EMDB-1638:
Proteome organization in a genome-reduced bacterium -Gyrase of Mycoplasma pneumoniae -
Method: single particle / : Kuhner S, vanNoort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castano-Diez D, Chen WH, Devos D, Guell Cargol M, Norambuena T, Racke I, Rybin V, Schmidt A, Yus E, Aebersold R, Herrmann R, Bottcher B, Frangakis AS, Russell RB, Serrano L, Bork P, Gavin AC
![](data/emdb/media/1639/snaps2.jpg)
EMDB-1639:
Proteome organization in a genome-reduced bacterium -RNA-polymeraseof Mycoplasma pneumoniae -
Method: single particle / : Kuhner S, vanNoort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castano-Diez D, Chen WH, Devos D, Guell Cargol M, Norambuena T, Racke I, Rybin V, Schmidt A, Yus E, Aebersold R, Herrmann R, Bottcher B, Frangakis AS, Russell RB, Serrano L, Bork P, Gavin AC