[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 950 items for (author: singh & j)

EMDB-54547:
Cerebellar GluA1/4 NTD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3q:
Cerebellar GluA1/4 NTD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-63082:
Cryo-EM structure of ToMMV
Method: helical / : Chatterjee A, Venkatasubramanian A, Mazumdar P, Singh SK, Roy A, Das U, Mandal B, Datta PP

PDB-9ti4:
High resolution Cryo-EM structure of human complex I in mitochondria
Method: single particle / : Nguyen MD, Singh V, Rorbach J

EMDB-54556:
Cerebellar GluA1/4 LBD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3z:
Cerebellar GluA1/4 LBD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54793:
Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54794:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-54795:
Cryo-EM map of focus refined ASB9-Elob/C-CKB bound to Nedd8-CUL5-RBX2-ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54892:
consensus map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB
Method: single particle / : Schulman BA, Du J

EMDB-54893:
Focus refined map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB, focus refined on ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54933:
Consensus Map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54934:
Focus refined map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdx:
Structure of RBR binding E2 variant crosslinked with NEDD8-CUL5-RBX2 bound ARIH2 and Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdy:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-54543:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54558:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54559:
Cerebellar GluAx/A4 TMD with four TARPs (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55413:
GluA4 N-terminal domain bound to nanobody NB74 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55414:
GluA4 LBD-TMD with TARP gamma 2 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55418:
GluA4 with TARP gamma2 (consensus refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55419:
Full-length GluA4 with TARP gamma 2 (composite map)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3o:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s41:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-72897:
insect H/ACA snoRNP class I
Method: single particle / : Panwar HS, Worden EW

EMDB-72898:
insect H/ACA snoRNP class II composite
Method: single particle / : Panwar HS, Worden EW

EMDB-72899:
insect H/ACA snoRNP class II Consensus map
Method: single particle / : Panwar HS, Worden EW

EMDB-72900:
insect class II H/ACA snoRNP - Focused map 3'half
Method: single particle / : Panwar HS, Worden EW

EMDB-72901:
insect class II H/ACA - Focused map 5' half
Method: single particle / : Panwar HS, Worden EW

EMDB-72902:
insect H/ACA snoRNP class III
Method: single particle / : Panwar HS, Worden EW

EMDB-72903:
insect H/ACA snoRNP class IV
Method: single particle / : Panwar HS, Worden EW

PDB-9yfl:
insect H/ACA snoRNP class I
Method: single particle / : Panwar HS, Worden EW

PDB-9yfm:
insect H/ACA snoRNP class II composite
Method: single particle / : Panwar HS, Worden EW

PDB-9yfn:
insect H/ACA snoRNP class III
Method: single particle / : Panwar HS, Worden EW

PDB-9yfo:
insect H/ACA snoRNP class IV
Method: single particle / : Panwar HS, Worden EW

EMDB-73044:
Cryo-EM structure of GroEL-gammaATP
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-73045:
GroEL Apoenzyme
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-73200:
Cryo-EM structure of GroEL-ADP
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9ykc:
Cryo-EM structure of GroEL-gammaATP
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9yke:
GroEL Apoenzyme
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9ynj:
Cryo-EM structure of GroEL-ADP
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-52596:
Initial respirasome complex map (consensus map)
Method: single particle / : Nguyen MD, Rorbach J

EMDB-52612:
Complex IV with HIGD2A density and incoming NDUFA4 (class 2)
Method: single particle / : Nguyen MD, Rorbach J

EMDB-52613:
NDUFA4 bound complex IV with weak density from HIGD2A
Method: single particle / : Nguyen MD, Rorbach J

EMDB-52654:
Cryo-EM structure of HIGD2A bound complex IV
Method: single particle / : Nguyen MD, Rorbach J, Singh V

EMDB-52662:
Cryo-EM structure of NDUFA4 bound complex IV within the respirasome complex
Method: single particle / : Nguyen MD, Singh V, Rorbach J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more