[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,648 items for (author: shao & y)

EMDB-62892:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

PDB-9l8w:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-65405:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

EMDB-65406:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

PDB-9vx1:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

PDB-9vx6:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-52235:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (consensus)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52252:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU body)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52256:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52257:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52270:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep1-Aep2-Atp25)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52276:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep3)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52277:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (consensus map)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52278:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52279:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52280:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52281:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52283:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hlz:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hm0:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-48387:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Sherpa D, Shao S

EMDB-48388:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (Small ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48390:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (large ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48700:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (composite map SSU and Aep1-Aep2-Atp25 complex)
Method: single particle / : Sherpa D, Shao S

EMDB-66856:
Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain
Method: single particle / : Li ZQ, Niu X

PDB-9xgo:
Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain
Method: single particle / : Li ZQ, Niu X

EMDB-65707:
5-CT-bound serotonin 5A (5-HT5A) receptor-Gi protein complex
Method: single particle / : Zhang X, Xie L, Chen P, Yu J, Tian X, Wei J, Shao Z, Yan W, Xu Z

PDB-9w6w:
5-CT-bound serotonin 5A (5-HT5A) receptor-Gi protein complex
Method: single particle / : Zhang X, Xie L, Chen P, Yu J, Tian X, Wei J, Shao Z, Yan W, Xu Z

EMDB-66205:
Cryo-EM structure of DAMGO-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66207:
Cryo-EM structure of DAMGO-muOR-arrestin-1-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66208:
Cryo-EM structure of endomorphin-1-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-66209:
Cryo-EM structure of endomorphin-1-muOR-arrestin2-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

PDB-9wst:
Cryo-EM structure of DAMGO-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

PDB-9wsv:
Cryo-EM structure of DAMGO-muOR-arrestin-1-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

PDB-9wsw:
Cryo-EM structure of endomorphin-1-muOR-Gz-scFv16 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

PDB-9wsx:
Cryo-EM structure of endomorphin-1-muOR-arrestin2-Fab30 complex
Method: single particle / : Zhang H, Wang X, Xi K, Shen Q, Xue J, Zhu Y, Yang G, Zhang Y

EMDB-64134:
SARM1 senses DNA to promote NAD degradation
Method: single particle / : Wang LN, Yang QK

PDB-9uga:
SARM1 senses DNA to promote NAD degradation
Method: single particle / : Wang LN, Yang QK

EMDB-63205:
The cryo-EM structure of the heterododecameric human Derlin-1/p97 complex
Method: single particle / : Cao Y, Wang Q, Yao D, Rao B, Xia Y, Li W, Li S, Shen Y

PDB-9llk:
The cryo-EM structure of the heterododecameric human Derlin-1/p97 complex
Method: single particle / : Cao Y, Wang Q, Yao D, Rao B, Xia Y, Li W, Li S, Shen Y

EMDB-63538:
Cryo-EM structure of dVGAC complexed with iodide
Method: single particle / : Lu PL, Zhou C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more