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Showing 1 - 50 of 143 items for (author: sekine & s)

EMDB-66103:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66104:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66105:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66106:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66107:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, FACT-hexamer)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wms:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmt:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmu:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmv:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmw:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, FACT-hexamer)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-60592:
RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Hirano R, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

EMDB-60593:
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Rina H, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

PDB-9ii7:
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Rina H, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

EMDB-61058:
Paused elongation complex of mammalian RNA polymerase II with nucleosome (PEC2-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

EMDB-61059:
Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC1-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

EMDB-61060:
Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC2-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

PDB-9j0n:
Paused elongation complex of mammalian RNA polymerase II with nucleosome (PEC2-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

PDB-9j0o:
Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC1-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

PDB-9j0p:
Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC2-nuc)
Method: single particle / : Naganuma M, Kujirai T, Ehara H, Uejima T, Ito T, Goto M, Aoki M, Henmi M, Miyamoto-Kohno S, Shirouzu M, Kurumizaka H, Sekine S

EMDB-38877:
Cryo-EM structure of the overlapping di-nucleosome (closed form)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

EMDB-38878:
Cryo-EM structure of the overlapping di-nucleosome (intermediate form2)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

EMDB-38879:
Cryo-EM structure of the overlapping di-nucleosome (open form)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

EMDB-38880:
Cryo-EM structure of the overlapping di-nucleosome (intermediate form1)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

PDB-8y3c:
Cryo-EM structure of the overlapping di-nucleosome (closed form)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

PDB-8y3d:
Cryo-EM structure of the overlapping di-nucleosome (intermediate form2)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

PDB-8y3e:
Cryo-EM structure of the overlapping di-nucleosome (open form)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

PDB-8y3f:
Cryo-EM structure of the overlapping di-nucleosome (intermediate form1)
Method: single particle / : Tanaka H, Nishimura M, Takizawa Y, Nozawa K, Ehara H, Sekine S, Kurumizaka H

EMDB-39211:
Cryo EM structure of Komagataella phaffii Rat1-Rai1-Rtt103 complex
Method: single particle / : Yanagisawa T, Murayama Y, Ehara H, Sekine SI

EMDB-39221:
Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex
Method: single particle / : Yanagisawa T, Murayama Y, Ehara H, Sekine SI

EMDB-39226:
Cryo EM structure of Komagataella phaffii RNAPII-Rat1-Rai1 pre-termination complex
Method: single particle / : Murayama Y, Yanagisawa T, Ehara H, Sekine S

EMDB-39227:
Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex bound within the RNAPII cleft
Method: single particle / : Murayama Y, Yanagisawa T, Ehara H, Sekine S

PDB-8yf5:
Cryo EM structure of Komagataella phaffii Rat1-Rai1-Rtt103 complex
Method: single particle / : Yanagisawa T, Murayama Y, Ehara H, Sekine SI

PDB-8yfe:
Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex
Method: single particle / : Yanagisawa T, Murayama Y, Ehara H, Sekine SI

PDB-8yfq:
Cryo EM structure of Komagataella phaffii RNAPII-Rat1-Rai1 pre-termination complex
Method: single particle / : Murayama Y, Yanagisawa T, Ehara H, Sekine S

PDB-8yfr:
Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex bound within the RNAPII cleft
Method: single particle / : Murayama Y, Yanagisawa T, Ehara H, Sekine S

EMDB-39119:
Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence
Method: single particle / : Kimura T, Hirai S, Kujirai T, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-39120:
Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant
Method: single particle / : Kimura T, Hirai S, Kujirai T, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8ybj:
Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence
Method: single particle / : Kimura T, Hirai S, Kujirai T, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8ybk:
Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant
Method: single particle / : Kimura T, Hirai S, Kujirai T, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

PDB-7yq8:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

EMDB-36251:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

EMDB-36252:
RNA polymerase II elongation complex containing 40 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

EMDB-36253:
RNA polymerase II elongation complex containing 60 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

EMDB-37848:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(0) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

PDB-8jh2:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

PDB-8jh3:
RNA polymerase II elongation complex containing 40 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

PDB-8jh4:
RNA polymerase II elongation complex containing 60 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H

EMDB-37070:
Cryo-EM structure of the human nucleosome containing H3.8
Method: single particle / : Hirai H, Kujirai T, Takizawa Y, Kurumizaka H

PDB-8kb5:
Cryo-EM structure of the human nucleosome containing H3.8
Method: single particle / : Hirai H, Kujirai T, Takizawa Y, Kurumizaka H

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