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Showing 1 - 50 of 104 items for (author: sekine & s)
![](data/emdb/media/34022/emdbimg.jpg)
EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S
![](data/pdb/img/7yq8.jpg)
PDB-7yq8:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S
![](data/emdb/media/36251/emdbimg.jpg)
EMDB-36251:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/emdb/media/36252/emdbimg.jpg)
EMDB-36252:
RNA polymerase II elongation complex containing 40 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/emdb/media/36253/emdbimg.jpg)
EMDB-36253:
RNA polymerase II elongation complex containing 60 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/emdb/media/37848/emdbimg.jpg)
EMDB-37848:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(0) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/pdb/img/8jh2.jpg)
PDB-8jh2:
RNA polymerase II elongation complex bound with Elf1, Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/pdb/img/8jh3.jpg)
PDB-8jh3:
RNA polymerase II elongation complex containing 40 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/pdb/img/8jh4.jpg)
PDB-8jh4:
RNA polymerase II elongation complex containing 60 bp upstream DNA loop, stalled at SHL(-1) of the nucleosome
Method: single particle / : Akatsu M, Fujita R, Ogasawara M, Ehara H, Kujirai T, Takizawa Y, Sekine S, Kurumizaka H
![](data/emdb/media/37070/emdbimg.jpg)
EMDB-37070:
Cryo-EM structure of the human nucleosome containing H3.8
Method: single particle / : Hirai H, Kujirai T, Takizawa Y, Kurumizaka H
![](data/pdb/img/8kb5.jpg)
PDB-8kb5:
Cryo-EM structure of the human nucleosome containing H3.8
Method: single particle / : Hirai H, Kujirai T, Takizawa Y, Kurumizaka H
![](data/emdb/media/36389/emdbimg.jpg)
EMDB-36389:
Cryo-EM structure of the human nucleosome with scFv
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/emdb/media/36390/emdbimg.jpg)
EMDB-36390:
Cryo-EM structure of the human nucleosome lacking N-terminal region of H2A, H2B, H3, and H4
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/emdb/media/36391/emdbimg.jpg)
EMDB-36391:
Cryo-EM structure of the 145 bp human nucleosome containing H3.2 C110A mutant
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/emdb/media/36393/emdbimg.jpg)
EMDB-36393:
Cryo-EM structure of the 145 bp human nucleosome containing acetylated H3 tail
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/pdb/img/8jl9.jpg)
PDB-8jl9:
Cryo-EM structure of the human nucleosome with scFv
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/pdb/img/8jla.jpg)
PDB-8jla:
Cryo-EM structure of the human nucleosome lacking N-terminal region of H2A, H2B, H3, and H4
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/pdb/img/8jlb.jpg)
PDB-8jlb:
Cryo-EM structure of the 145 bp human nucleosome containing H3.2 C110A mutant
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/pdb/img/8jld.jpg)
PDB-8jld:
Cryo-EM structure of the 145 bp human nucleosome containing acetylated H3 tail
Method: single particle / : Oishi T, Hatazawa S, Kujirai T, Kato J, Kobayashi Y, Ogasawara M, Akatsu M, Takizawa Y, Kurumizaka H
![](data/emdb/media/36744/emdbimg.jpg)
EMDB-36744:
Thermus thermophilus Rho-engaged RNAP elongation complex; EC part
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/36745/emdbimg.jpg)
EMDB-36745:
Thermus thermophilus Rho-engaged RNAP elongation complex; Rho part
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/34400/emdbimg.jpg)
EMDB-34400:
Cryo-EM structure of the NS5-SLA complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/emdb/media/34401/emdbimg.jpg)
EMDB-34401:
Cryo-EM structure of the NS5-NS3-SLA complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/emdb/media/34402/emdbimg.jpg)
EMDB-34402:
Cryo-EM structure of the the NS5-NS3 RNA-elongation complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/pdb/img/8gzp.jpg)
PDB-8gzp:
Cryo-EM structure of the NS5-SLA complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/pdb/img/8gzq.jpg)
PDB-8gzq:
Cryo-EM structure of the NS5-NS3-SLA complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/pdb/img/8gzr.jpg)
PDB-8gzr:
Cryo-EM structure of the the NS5-NS3 RNA-elongation complex
Method: single particle / : Osawa T, Ehara H, Sekine S
![](data/emdb/media/32407/emdbimg.jpg)
EMDB-32407:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-4) of the nucleosome
Method: single particle / : Osumi K, Kujirai T
![](data/emdb/media/32408/emdbimg.jpg)
EMDB-32408:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3.5) of the nucleosome
Method: single particle / : Osumi K, Kujirai T
![](data/emdb/media/32409/emdbimg.jpg)
EMDB-32409:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3) of the nucleosome
Method: single particle / : Osumi K, Kujirai T
![](data/emdb/media/34685/emdbimg.jpg)
EMDB-34685:
RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome
Method: single particle / : Osumi K, Kujirai T, Ehara H, Kinoshita C, Saotome M, Kagawa W, Sekine S, Takizawa Y, Kurumizaka H
![](data/pdb/img/7wbv.jpg)
PDB-7wbv:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-4) of the nucleosome
Method: single particle / : Osumi K, Kujirai T, Ehara H, Sekine S, Takizawa Y, Kurumizaka H
![](data/pdb/img/7wbw.jpg)
PDB-7wbw:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3.5) of the nucleosome
Method: single particle / : Osumi K, Kujirai T, Ehara H, Sekine S, Takizawa Y, Kurumizaka H
![](data/pdb/img/7wbx.jpg)
PDB-7wbx:
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3) of the nucleosome
Method: single particle / : Osumi K, Kujirai T, Ehara H, Sekine S, Takizawa Y, Kurumizaka H
![](data/pdb/img/8he5.jpg)
PDB-8he5:
RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome
Method: single particle / : Osumi K, Kujirai T, Ehara H, Kinoshita C, Saotome M, Kagawa W, Sekine S, Takizawa Y, Kurumizaka H
![](data/emdb/media/34996/emdbimg.jpg)
EMDB-34996:
Thermus thermophilus RNA polymerase elongation complex
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/34997/emdbimg.jpg)
EMDB-34997:
Thermus thermophilus RNA polymerase coreenzyme
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/34999/emdbimg.jpg)
EMDB-34999:
Thermus thermophilus transcription termination factor Rho bound with ADP-BeF3
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/35000/emdbimg.jpg)
EMDB-35000:
Thermus thermophilus RNA polymerase bound with an inverted Rho hexamer
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/35004/emdbimg.jpg)
EMDB-35004:
Thermus thermophilus Rho-engaged RNAP elongation complex
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/pdb/img/8hsg.jpg)
PDB-8hsg:
Thermus thermophilus RNA polymerase elongation complex
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/pdb/img/8hsh.jpg)
PDB-8hsh:
Thermus thermophilus RNA polymerase coreenzyme
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/pdb/img/8hsj.jpg)
PDB-8hsj:
Thermus thermophilus transcription termination factor Rho bound with ADP-BeF3
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/pdb/img/8hsl.jpg)
PDB-8hsl:
Thermus thermophilus RNA polymerase bound with an inverted Rho hexamer
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/pdb/img/8hsr.jpg)
PDB-8hsr:
Thermus thermophilus Rho-engaged RNAP elongation complex
Method: single particle / : Murayama Y, Ehara H, Sekine S
![](data/emdb/media/32094/emdbimg.jpg)
EMDB-32094:
Cryo-EM structure of H2A-ubiquitinated nucleosome
Method: single particle / : Ohtomo H, Ito S, McKenzie NJ, Uckelmann M, Wakamori M, Ehara H, Tsunaka Y, Shibata M, Sekine S, Umehara T, Davidovich C, Koseki H, Nishimura Y
![](data/emdb/media/34415/emdbimg.jpg)
EMDB-34415:
RNA polymerase II transcribing a chromatosome (type I)
Method: single particle / : Hirano R, Ehara H, Tomoya K, Takizawa Y, Sekine S, Kurumizaka H
![](data/emdb/media/34416/emdbimg.jpg)
EMDB-34416:
RNA polymerase II transcribing a chromatosome (type II)
Method: single particle / : Hirano R, Ehara H, Tomoya K, Takizawa Y, Sekine S, Kurumizaka H
![](data/pdb/img/8h0v.jpg)
PDB-8h0v:
RNA polymerase II transcribing a chromatosome (type I)
Method: single particle / : Hirano R, Ehara H, Tomoya K, Takizawa Y, Sekine S, Kurumizaka H
![](data/pdb/img/8h0w.jpg)
PDB-8h0w:
RNA polymerase II transcribing a chromatosome (type II)
Method: single particle / : Hirano R, Ehara H, Tomoya K, Takizawa Y, Sekine S, Kurumizaka H
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