[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 249 items for (author: schafer & e)

EMDB-53362:
human PAN2-PAN3 deadenylase complex in the apo state
Method: single particle / : Albrecht JC, Reitinger T, Basquin J, Schuessler S, Schaefer IB, Conti E

EMDB-53392:
human PAN2-PAN3 bound to a 90Ai/PABPC1 RNP
Method: single particle / : Albrecht JC, Reitinger T, Basquin J, Schuessler S, Schaefer IB, Conti E

EMDB-53424:
human PAN2-PAN3 bound to a 180Ai/PABPC1 RNP
Method: single particle / : Albrecht JC, Reitinger T, Basquin J, Schuessler S, Schaefer IB, Conti E

EMDB-70880:
Apoferritin from mouse on graphene
Method: single particle / : Schaefer JH, Lander GC

EMDB-54211:
Structure of the Ypt7 GEF complex Mon1-Ccz1 from Chaetomium Thermophilum
Method: single particle / : Wilmes S, Schaefer J, Moeller A, Kuemmel D

EMDB-54212:
Ypt7 in complex with its GEF Mon1-Ccz1
Method: single particle / : Wilmes S, Schaefer J, Moeller A, Kuemmel D

EMDB-54213:
human Fuzzy-Inturned
Method: single particle / : Wilmes S, Schaefer J, Januliene D, Moeller A, Kuemmel D

EMDB-54214:
Rab23 in complex with Fuzzy-Inturned
Method: single particle / : Wilmes S, Schaefer J, Januliene D, Moeller A, Kuemmel D

EMDB-48650:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

EMDB-46569:
Structure of HKU5-20s spike glycoprotein
Method: single particle / : Wu Z, Fan C, Bjorkman PJ

EMDB-43408:
Structure of SARS-CoV spike in complex with CoV1-62 IgG
Method: single particle / : Bangaru S, Ward AB

EMDB-50502:
Lysosomal transporting complex of beta-glucocerebrosidase (GCase) and lysosomal integral membrane protein 2 (LIMP-2) with bound Pro-macrobodies (Combined focus map)
Method: single particle / : Dobert JP, Schaefer JHS, Dal Maso T, Socher E, Versees W, Moeller A, Zunke F, Arnold P

EMDB-50936:
Lysosomal transporting complex of beta-glucocerebrosidase (GCase) and lysosomal integral membrane protein 2 (LIMP-2) with bound Pro-macrobodies (consensus map)
Method: single particle / : Dobert JP, Schaefer JHS, Dal Maso T, Socher E, Versees W, Moeller A, Zunke F, Arnold P

EMDB-50937:
Lysosomal transporting complex of beta-glucocerebrosidase (GCase) and lysosomal integral membrane protein 2 (LIMP-2) with bound Pro-macrobodies (GCase local refinement map)
Method: single particle / : Dobert JP, Schaefer JHS, Dal Maso T, Socher E, Versees W, Moeller A, Zunke F, Arnold P

EMDB-50938:
Lysosomal transporting complex of beta-glucocerebrosidase (GCase) and lysosomal integral membrane protein 2 (LIMP-2) with bound Pro-macrobodies (LIMP-2 local refinement)
Method: single particle / : Dobert JP, Schaefer JHS, Dal Maso T, Socher E, Versees W, Moeller A, Zunke F, Arnold P

EMDB-47700:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-49564:
cryoEM structure of human ACKR3 phosphorylated by GRK2 in complex with Arr2
Method: single particle / : Chen Q, Tesmer JJG

PDB-9e82:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-50774:
MsbA in DDM inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50775:
MsbA in LMNG inward-facing narrow
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50776:
MsbA in LMNG inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50777:
MsbA in GDN inward-facing narrow
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50778:
MsbA in GDN inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50779:
MsbA in Triton inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50780:
MsbA in Triton inward-facing wide (+) open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50782:
MsbA in UDM inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50783:
MsbA in UDM inward-facing wide (+) open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50784:
MsbA in MSP1D1 Nanodisc inward-facing narrow open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shearer D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50785:
MsbA in MSP1D1 (EPL:PC) Nanodisc inward-facing narrow open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50786:
MsbA in MSP1E3D1 Nanodisc inward-facing narrow open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50787:
MsbA in MSP2N2 Nanodisc inward-facing narrow open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50788:
MsbA in peptidisc inward-facing narrow (-) open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50789:
MsbA in peptidisc inward-facing narrow open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50790:
MsbA in Amphipol A8-35 inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50791:
MsbA in Amphipol A8-35 inward-facing wide (+) open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50792:
MsbA in Amphipol 18 inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50793:
MsbA in Amphipol 18 inward-facing wide (+) open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-50794:
MsbA in MSP2N2 Nanodisc inward-facing wide open
Method: single particle / : Hoffmann L, Baier A, Jorde L, Kamel M, Schaefer J, Schnelle K, Scholz A, Shvarev D, Wong J, Parey K, Januliene D, Moeller A

EMDB-43407:
Structure of SARS-CoV spike in complex with CoV1-65 Fab (NTD-bound)
Method: single particle / : Bangaru S, Ward AB

EMDB-49574:
Demo apoferritin data for Magellon
Method: single particle / : Stagg SM, Khoshbin B, Damodar P, Cianfrocco MA, Lander GC

EMDB-46715:
MERS NTD-specific polyclonal antibodies
Method: single particle / : Ward AB, Bangaru S

EMDB-41290:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41291:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41292:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2
Method: single particle / : Chen Q, Tesmer JJG

EMDB-43745:
SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Method: single particle / : Yin Y, Van Damme E

EMDB-41289:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin2 in nanodisc
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41295:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41296:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41297:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-43277:
cryoEM structure of human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 variant with the C edge loop from Arrestin2 inserted
Method: single particle / : Chen Q, Tesmer JJG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more