[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 320 items for (author: sanchez & r)

EMDB-70093:
Cryo-EM structure of in-vitro alpha-synuclein fibril bound with Exemplar-6 PET-radioligand
Method: helical / : Sanchez JC, Perez RM, Borcik CG, Guarino DS, Dhavala DD, Baumgardt JK, Shaffer KD, Kotzbauer PT, Mach RH, Rienstra CM, Petersson EJ, Wright ER

PDB-9o4b:
Cryo-EM structure of in-vitro alpha-synuclein fibril bound with Exemplar-6 PET-radioligand
Method: helical / : Sanchez JC, Perez RM, Borcik CG, Guarino DS, Dhavala DD, Baumgardt JK, Shaffer KD, Kotzbauer PT, Mach RH, Rienstra CM, Petersson EJ, Wright ER

EMDB-49656:
Rabbit RB142 polyclonal Fab in complex with HIV-1 1086C NFL Env trimer
Method: single particle / : Lin RN, Torres JL, Ozorowski G, Ward AB

EMDB-50320:
Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex
Method: single particle / : Safdari HA, Wilson DN

EMDB-50327:
Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex
Method: single particle / : Safdari HA, Wilson DN

EMDB-50476:
Structure of 30S-IF1-IF3-mRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-50912:
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-51214:
Structure of Kasugamycin-30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form
Method: single particle / : Safdari HA, Wilson DN

EMDB-51217:
Structure of Edeine-30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form
Method: single particle / : Safdari HA, Wilson DN

PDB-9fco:
Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex
Method: single particle / : Safdari HA, Wilson DN

PDB-9fda:
Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex
Method: single particle / : Safdari HA, Wilson DN

PDB-9fib:
Structure of 30S-IF1-IF3-mRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

PDB-9g06:
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-41072:
Human leukocyte antigen bound by two alloreactive antibody Fabs
Method: single particle / : Kizziah JL, Killian JT, Diaz-Avalos R, Qiu S, Yang G, Green T, Lund FE

EMDB-46728:
ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46729:
Map with best defined NZF RYBP of ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46730:
Map with best defined RING1B/BMI1 of ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46731:
Composite map of ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46732:
Overall map of ncPRC1RYBP bound to doubly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46733:
ncPRC1RYBP bound to symmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46734:
Map focused on RYBP/Ub of ncPRC1RYBP bound to symmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46735:
Map focused on RING1B/BMI1 of ncPRC1RYBP bound to symmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46736:
Overall map of ncPRC1RYBP bound to asymmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46737:
Map focused on RYBP/Ub of ncPRC1RYBP bound to asymmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46738:
Map focused on RING1B/BMI1 of ncPRC1RYBP bound to asymmetric H2AK119Ub dinucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46771:
ncPRC1RYBP bound to H2AK119Ub/H1.4 chromatosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46822:
ncPRC1RYBP Delta-linker mutant bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-46823:
ncPRC1RYBP bound to unmodified nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

PDB-9dby:
ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

PDB-9dde:
ncPRC1RYBP bound to H2AK119Ub/H1.4 chromatosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

PDB-9dg3:
ncPRC1RYBP Delta-linker mutant bound to singly modified H2AK119Ub nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

PDB-9dgg:
ncPRC1RYBP bound to unmodified nucleosome
Method: single particle / : Godinez-Lopez V, Valencia-Sanchez MI, Armache JP, Armache KJ

EMDB-51279:
SARS-CoV-2 Spike protein Beta Variant at 4C structural flexibility / heterogeneity analyses
Method: single particle / : Herreros D, Mata CP, Noddings C, Irene D, Agard DA, Tsai MD, Sorzano COS, Carazo JM

EMDB-51280:
SARS-CoV-2 Spike protein Beta Variant at 37C structural flexibility / heterogeneity analyses
Method: single particle / : Herreros D, Mata CP, Noddings C, Irene D, Agard DA, Tsai MD, Sorzano COS, Carazo JM

PDB-9gdx:
SARS-CoV-2 Spike protein Beta Variant at 4C structural flexibility / heterogeneity analyses
Method: single particle / : Herreros D, Mata CP, Noddings C, Irene D, Agard DA, Tsai MD, Sorzano COS, Carazo JM

PDB-9gdy:
SARS-CoV-2 Spike protein Beta Variant at 37C structural flexibility / heterogeneity analyses
Method: single particle / : Herreros D, Mata CP, Noddings C, Irene D, Agard DA, Tsai MD, Sorzano COS, Carazo JM

EMDB-40796:
BG505 GT1.1 SOSIP in complex with NHP Fabs 12C11 and RM20A3
Method: single particle / : Zhang S, Torres JL, Ozorowski G, Ward AB

EMDB-42767:
Caulobacter crescentus FljL flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45500:
Caulobacter crescentus FljN flagellar filament (symmetrized)
Method: helical / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45503:
Caulobacter crescentus FljJK flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45504:
Caulobacter crescentus FljJL flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45505:
Caulobacter crescentus FljJM flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45506:
Caulobacter crescentus FljJN flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-8uxk:
Caulobacter crescentus FljL flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-9cef:
Caulobacter crescentus FljN flagellar filament (symmetrized)
Method: helical / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-9cej:
Caulobacter crescentus FljJK flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-9cem:
Caulobacter crescentus FljJL flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-9ceo:
Caulobacter crescentus FljJM flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

PDB-9cep:
Caulobacter crescentus FljJN flagellar filament (asymmetrical)
Method: single particle / : Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER

EMDB-45639:
Cryo-EM structure of in-vitro alpha-synuclein fibril
Method: helical / : Sanchez JC, Borcik CG, Tonelli M, Sibert B, Rienstra CM, Wright ER, Cai K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more