[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 462 items for (author: pauli & a)

EMDB-53008:
Activated XauSPARDA filament assembly with bound dsDNA substrate
Method: single particle / : Manakova EN, Zaremba M, Jurgelaitis E

PDB-9qcc:
Activated XauSPARDA filament assembly with bound dsDNA substrate
Method: single particle / : Manakova EN, Zaremba M, Jurgelaitis E

EMDB-55898:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with bound plastocyanin
Method: single particle / : Pietras R, Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Mielecki B, Jaciuk M, Koziej L, Glatt S, Osyczka A

PDB-9tgg:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with bound plastocyanin
Method: single particle / : Pietras R, Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Mielecki B, Jaciuk M, Koziej L, Glatt S, Osyczka A

EMDB-52972:
Cryo-EM structure of Thomasclavelia ramosa IgA peptidase (IgAse) active site mutant (S32-N876)
Method: single particle / : Ramirez-Larrota JS, Eckhard U, Guerra P, Juyoux P, Gomis-Ruth FX

PDB-9qa6:
Cryo-EM structure of Thomasclavelia ramosa IgA peptidase (IgAse) active site mutant (S32-N876)
Method: single particle / : Ramirez-Larrota JS, Eckhard U, Guerra P, Juyoux P, Gomis-Ruth FX

EMDB-50647:
Stalled 90S - Utp23-Krr1-deltaC3 - Consensus refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50648:
Stalled 90S - Utp23-Krr1-deltaC3 - Head-Kre33 module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50649:
Stalled 90S - Utp23-Krr1-deltaC3 - Krr1 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50650:
Stalled 90S - Utp23-Krr1-deltaC3 - Nop14 module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50651:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp10 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50652:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp12 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50653:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp20 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50654:
Stalled 90S - Utp23-Krr1-deltaC3 - UTP-A - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50958:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - 3' HACA - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50959:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - 5' HACA - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50960:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - Platform module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50961:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - Consensus refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50964:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50967:
snR30 snoRNP - Class 1 - Utp23-Krr1-wt
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50968:
snR30 snoRNP - State 2 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50969:
snR30 snoRNP - Class 2 - Utp23-Krr1-wt
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50991:
Stalled 90S - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g25:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g28:
snR30 snoRNP - State 2 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g33:
Stalled 90S - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-62841:
Cryo-EM structure of the thermophile spliceosome (state ILS)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

EMDB-62842:
Cryo-EM structure of the thermophile spliceosome (state B*Q1)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

EMDB-62843:
Cryo-EM structure of the thermophile spliceosome (state B*Q2)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

EMDB-62844:
Cryo-EM structure of the thermophile spliceosome (state B*Q2 focus DHX15)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

PDB-9l5r:
Cryo-EM structure of the thermophile spliceosome (state ILS)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

PDB-9l5s:
Cryo-EM structure of the thermophile spliceosome (state B*Q1)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

PDB-9l5t:
Cryo-EM structure of the thermophile spliceosome (state B*Q2)
Method: single particle / : Li Y, Fischer P, Wang M, Yuan R, Meng W, Luehrmann R, Lau B, Hurt E, Cheng J

EMDB-52458:
In vitro grown K58N Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R

PDB-9hxa:
In vitro grown K58N Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R

EMDB-52166:
In vitro grown G14R Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Fernandez-Busnadiego R

PDB-9hgs:
In vitro grown G14R Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Fernandez-Busnadiego R

EMDB-51096:
Cryo-EM structure of CdaA-DAC domain in complex with GlmM
Method: single particle / : Drougkas P, Paulino C, Poolman B

PDB-9g69:
Cryo-EM structure of CdaA-DAC domain in complex with GlmM
Method: single particle / : Drougkas P, Paulino C, Poolman B

EMDB-43585:
Structure of the AcMNPV baculovirus VP39 nucleocapsid (C14 helical reconstruction)
Method: helical / : Hardy JM, Johnstone BA, Ha JH, Venugopal H, Coulibaly F

EMDB-43586:
Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Method: single particle / : Johnstone BA, Hardy JM, Ha JH, Venugopal H, Coulibaly F

EMDB-43587:
The base complex of the baculovirus nucleocapsid (Autographa californica multiple nucleopolyhedrovirus)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

EMDB-43589:
The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Ha J, Venugopal H, Coulibaly F

EMDB-43590:
The cap complex of the baculovirus nucleocapsid (Autographa californica multiple nucleopolyhedrovirus)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

EMDB-43591:
The cap of the AcMNPV baculovirus nucleocapsid (localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Venugopal H, Coulibaly F

PDB-8vwh:
Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Method: single particle / : Johnstone BA, Hardy JM, Ha JH, Venugopal H, Coulibaly F

PDB-8vwj:
The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Method: single particle / : Johnstone BA, Koszalka P, Ha J, Venugopal H, Coulibaly F

EMDB-16950:
cryo-EM structure of human tRNA(AspGUC)
Method: single particle / : Biela AP

EMDB-19938:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with water molecules at 1.94 A resolution
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-19939:
Cryo-EM structure of Spinacia oleracea cytochrome b6f with decylplastoquinone bound at plastoquionol reduction site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more